Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
SEF1P34228 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
SEF1P34228 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
SEF1P34228 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
SEF1P34228 YJL150WYJL150W 303 nt0.96□□□□□ -2.26
SEF1P34228 ULI1YFR026C 510 nt0.94□□□□□ -2.26
SEF1P34228 YGL007C-AYGL007C-A 87 nt0.94□□□□□ -2.26
SEF1P34228 COX12YLR038C 252 nt0.93□□□□□ -2.26
SEF1P34228 COY1YKL179C 2040 nt0.92□□□□□ -2.26
SEF1P34228 YEL014CYEL014C 306 nt0.91□□□□□ -2.26
SEF1P34228 YJL182CYJL182C 318 nt0.91□□□□□ -2.26
SEF1P34228 SEC8YPR055W 3198 nt0.9□□□□□ -2.26
SEF1P34228 YLR466C-BYLR466C-B 117 nt0.9□□□□□ -2.27
SEF1P34228 RKR1YMR247C 4689 nt0.9□□□□□ -2.27
SEF1P34228 snR190snR190 190 nt0.9□□□□□ -2.27
SEF1P34228 Q0032Q0032 291 nt0.89□□□□□ -2.27
SEF1P34228 PRP39YML046W 1890 nt0.88□□□□□ -2.27
SEF1P34228 YLR282CYLR282C 342 nt0.88□□□□□ -2.27
SEF1P34228 YOL014WYOL014W 375 nt0.88□□□□□ -2.27
SEF1P34228 YPR160W-AYPR160W-A 81 nt0.88□□□□□ -2.27
SEF1P34228 UTP20YBL004W 7482 nt0.88□□□□□ -2.27
SEF1P34228 YGL123C-AYGL123C-A 231 nt0.87□□□□□ -2.27
SEF1P34228 YIL142C-AYIL142C-A 333 nt0.87□□□□□ -2.27
SEF1P34228 YOR161W-AYOR161W-A 81 nt0.87□□□□□ -2.27
SEF1P34228 YCR038W-AYCR038W-A 126 nt0.86□□□□□ -2.27
SEF1P34228 YIL002W-AYIL002W-A 210 nt0.86□□□□□ -2.27
SEF1P34228 COX5BYIL111W 456 nt0.86□□□□□ -2.27
SEF1P34228 YLR399W-AYLR399W-A 105 nt0.86□□□□□ -2.27
SEF1P34228 YPR117WYPR117W 7470 nt0.86□□□□□ -2.27
SEF1P34228 YER053C-AYER053C-A 114 nt0.85□□□□□ -2.27
SEF1P34228 YGR151CYGR151C 336 nt0.85□□□□□ -2.27
SEF1P34228 snR52snR52 92 nt0.85□□□□□ -2.27
SEF1P34228 CHS6YJL099W 2241 nt0.84□□□□□ -2.28
SEF1P34228 YKL100W-AYKL100W-A 90 nt0.83□□□□□ -2.28
SEF1P34228 YLR342W-AYLR342W-A 174 nt0.83□□□□□ -2.28
SEF1P34228 TRS65YGR166W 1683 nt0.83□□□□□ -2.28
SEF1P34228 PRP5YBR237W 2550 nt0.83□□□□□ -2.28
SEF1P34228 FYV10YIL097W 1551 nt0.83□□□□□ -2.28
SEF1P34228 YLR041WYLR041W 321 nt0.82□□□□□ -2.28
SEF1P34228 YLR294CYLR294C 330 nt0.82□□□□□ -2.28
SEF1P34228 MYO1YHR023W 5787 nt0.82□□□□□ -2.28
SEF1P34228 YML002WYML002W 2214 nt0.81□□□□□ -2.28
SEF1P34228 YEL073CYEL073C 324 nt0.8□□□□□ -2.28
SEF1P34228 YNL338WYNL338W 159 nt0.79□□□□□ -2.28
SEF1P34228 YMR160WYMR160W 2451 nt0.78□□□□□ -2.28
SEF1P34228 YOR381W-AYOR381W-A 168 nt0.78□□□□□ -2.28
SEF1P34228 PRP42YDR235W 1635 nt0.78□□□□□ -2.29
SEF1P34228 OST4YDL232W 111 nt0.77□□□□□ -2.29
SEF1P34228 YKL145W-AYKL145W-A 93 nt0.77□□□□□ -2.29
SEF1P34228 SEC1YDR164C 2175 nt0.77□□□□□ -2.29
SEF1P34228 tN(GUU)QtN(GUU)Q 71 nt0.76□□□□□ -2.29
SEF1P34228 LTE1YAL024C 4308 nt0.75□□□□□ -2.29
SEF1P34228 YBL053WYBL053W 375 nt0.74□□□□□ -2.29
SEF1P34228 YBL039C-AYBL039C-A 84 nt0.73□□□□□ -2.29
SEF1P34228 YGL182CYGL182C 324 nt0.72□□□□□ -2.29
SEF1P34228 YSP1YHR155W 3687 nt0.71□□□□□ -2.3
SEF1P34228 BEM3YPL115C 3387 nt0.71□□□□□ -2.3
SEF1P34228 YJL127W-AYJL127W-A 117 nt0.71□□□□□ -2.3
SEF1P34228 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
SEF1P34228 TAH1YCR060W 336 nt0.69□□□□□ -2.3
SEF1P34228 YDL007C-AYDL007C-A 258 nt0.69□□□□□ -2.3
SEF1P34228 YHR131W-AYHR131W-A 246 nt0.69□□□□□ -2.3
SEF1P34228 snR48snR48 113 nt0.69□□□□□ -2.3
SEF1P34228 UTP8YGR128C 2142 nt0.68□□□□□ -2.3
SEF1P34228 YOR170WYOR170W 306 nt0.68□□□□□ -2.3
SEF1P34228 tT(AGU)BtT(AGU)B 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)CtT(AGU)C 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)DtT(AGU)D 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)HtT(AGU)H 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)I1tT(AGU)I1 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)I2tT(AGU)I2 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)JtT(AGU)J 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)N1tT(AGU)N1 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)N2tT(AGU)N2 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)O1tT(AGU)O1 73 nt0.67□□□□□ -2.3
SEF1P34228 tT(AGU)O2tT(AGU)O2 73 nt0.67□□□□□ -2.3
SEF1P34228 SNU13YEL026W 381 nt0.66□□□□□ -2.3
SEF1P34228 tL(UAA)QtL(UAA)Q 85 nt0.66□□□□□ -2.3
SEF1P34228 YLR232WYLR232W 348 nt0.65□□□□□ -2.31
SEF1P34228 YOR102WYOR102W 351 nt0.64□□□□□ -2.31
SEF1P34228 BIR1YJR089W 2865 nt0.64□□□□□ -2.31
SEF1P34228 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
SEF1P34228 RPM2YML091C 3609 nt0.62□□□□□ -2.31
SEF1P34228 YDR544CYDR544C 429 nt0.62□□□□□ -2.31
SEF1P34228 YHL015W-AYHL015W-A 84 nt0.62□□□□□ -2.31
SEF1P34228 YOR329W-AYOR329W-A 210 nt0.61□□□□□ -2.31
SEF1P34228 snR39BsnR39B 96 nt0.61□□□□□ -2.31
SEF1P34228 PET111YMR257C 2403 nt0.61□□□□□ -2.31
SEF1P34228 NNF2YGR089W 2811 nt0.6□□□□□ -2.31
SEF1P34228 ULP2YIL031W 3105 nt0.59□□□□□ -2.31
SEF1P34228 YPL060C-AYPL060C-A 3315 nt0.59□□□□□ -2.31
SEF1P34228 YOR314W-AYOR314W-A 111 nt0.59□□□□□ -2.31
SEF1P34228 YOR192C-BYOR192C-B 5313 nt0.59□□□□□ -2.32
SEF1P34228 COG6YNL041C 2520 nt0.58□□□□□ -2.32
SEF1P34228 IQG1YPL242C 4488 nt0.57□□□□□ -2.32
SEF1P34228 YGR164WYGR164W 336 nt0.57□□□□□ -2.32
SEF1P34228 BUL2YML111W 2763 nt0.57□□□□□ -2.32
SEF1P34228 SDH6YDR379C-A 240 nt0.56□□□□□ -2.32
SEF1P34228 UTP10YJL109C 5310 nt0.56□□□□□ -2.32
SEF1P34228 FMP27YLR454W 7887 nt0.55□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 45.5 ms