Protein–RNA interactions for Protein: P15179

MSD1, Aspartate--tRNA ligase, mitochondrial, yeastyeast

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSD1P15179 Q0143Q0143 153 nt1.51□□□□□ -2.17
MSD1P15179 YLR041WYLR041W 321 nt1.51□□□□□ -2.17
MSD1P15179 PET127YOR017W 2403 nt1.51□□□□□ -2.17
MSD1P15179 CHS6YJL099W 2241 nt1.51□□□□□ -2.17
MSD1P15179 YBL039C-AYBL039C-A 84 nt1.5□□□□□ -2.17
MSD1P15179 FYV10YIL097W 1551 nt1.49□□□□□ -2.17
MSD1P15179 FYV8YGR196C 2454 nt1.49□□□□□ -2.17
MSD1P15179 SEC21YNL287W 2808 nt1.48□□□□□ -2.17
MSD1P15179 ASE1YOR058C 2658 nt1.47□□□□□ -2.17
MSD1P15179 SPC110YDR356W 2835 nt1.47□□□□□ -2.17
MSD1P15179 TAH1YCR060W 336 nt1.47□□□□□ -2.17
MSD1P15179 tH(GUG)E1tH(GUG)E1 72 nt1.47□□□□□ -2.17
MSD1P15179 tH(GUG)E2tH(GUG)E2 72 nt1.47□□□□□ -2.17
MSD1P15179 tH(GUG)G1tH(GUG)G1 72 nt1.47□□□□□ -2.17
MSD1P15179 tH(GUG)G2tH(GUG)G2 72 nt1.47□□□□□ -2.17
MSD1P15179 tH(GUG)HtH(GUG)H 72 nt1.47□□□□□ -2.17
MSD1P15179 tH(GUG)KtH(GUG)K 72 nt1.47□□□□□ -2.17
MSD1P15179 tH(GUG)MtH(GUG)M 72 nt1.47□□□□□ -2.17
MSD1P15179 SEC8YPR055W 3198 nt1.47□□□□□ -2.17
MSD1P15179 tL(UAA)QtL(UAA)Q 85 nt1.46□□□□□ -2.18
MSD1P15179 STB6YKL072W 2301 nt1.46□□□□□ -2.18
MSD1P15179 YLR232WYLR232W 348 nt1.44□□□□□ -2.18
MSD1P15179 KAP120YPL125W 3099 nt1.44□□□□□ -2.18
MSD1P15179 RPM2YML091C 3609 nt1.42□□□□□ -2.18
MSD1P15179 CDC39YCR093W 6327 nt1.42□□□□□ -2.18
MSD1P15179 YCL001W-BYCL001W-B 255 nt1.41□□□□□ -2.18
MSD1P15179 PAU12YGR294W 363 nt1.4□□□□□ -2.19
MSD1P15179 tV(UAC)BtV(UAC)B 74 nt1.4□□□□□ -2.19
MSD1P15179 tV(UAC)DtV(UAC)D 74 nt1.4□□□□□ -2.19
MSD1P15179 YLR399W-AYLR399W-A 105 nt1.4□□□□□ -2.19
MSD1P15179 YOR329W-AYOR329W-A 210 nt1.4□□□□□ -2.19
MSD1P15179 PAU24YBR301W 363 nt1.4□□□□□ -2.19
MSD1P15179 PRP16YKR086W 3216 nt1.39□□□□□ -2.19
MSD1P15179 RAD9YDR217C 3930 nt1.39□□□□□ -2.19
MSD1P15179 HKR1YDR420W 5409 nt1.39□□□□□ -2.19
MSD1P15179 YHR131W-AYHR131W-A 246 nt1.37□□□□□ -2.19
MSD1P15179 YNL067W-BYNL067W-B 141 nt1.37□□□□□ -2.19
MSD1P15179 YCR095W-AYCR095W-A 159 nt1.36□□□□□ -2.19
MSD1P15179 snR85snR85 171 nt1.36□□□□□ -2.19
MSD1P15179 QCR9YGR183C 201 nt1.36□□□□□ -2.19
MSD1P15179 YNL205CYNL205C 423 nt1.36□□□□□ -2.19
MSD1P15179 YNL284C-BYNL284C-B 5268 nt1.35□□□□□ -2.19
MSD1P15179 tM(CAU)Q2tM(CAU)Q2 78 nt1.35□□□□□ -2.19
MSD1P15179 YPR160W-AYPR160W-A 81 nt1.35□□□□□ -2.19
MSD1P15179 OST4YDL232W 111 nt1.33□□□□□ -2.2
MSD1P15179 BEM3YPL115C 3387 nt1.31□□□□□ -2.2
MSD1P15179 SIP4YJL089W 2490 nt1.31□□□□□ -2.2
MSD1P15179 SOM1YEL059C-A 225 nt1.3□□□□□ -2.2
MSD1P15179 YSP1YHR155W 3687 nt1.3□□□□□ -2.2
MSD1P15179 YDR544CYDR544C 429 nt1.29□□□□□ -2.2
MSD1P15179 tN(GUU)QtN(GUU)Q 71 nt1.27□□□□□ -2.21
MSD1P15179 YBR099CYBR099C 384 nt1.27□□□□□ -2.21
MSD1P15179 snR39BsnR39B 96 nt1.27□□□□□ -2.21
MSD1P15179 UBP3YER151C 2739 nt1.27□□□□□ -2.21
MSD1P15179 COG6YNL041C 2520 nt1.25□□□□□ -2.21
MSD1P15179 YDL073WYDL073W 2955 nt1.24□□□□□ -2.21
MSD1P15179 YJL127W-AYJL127W-A 117 nt1.22□□□□□ -2.21
MSD1P15179 SPT7YBR081C 3999 nt1.22□□□□□ -2.21
MSD1P15179 YDR210WYDR210W 228 nt1.21□□□□□ -2.22
MSD1P15179 YGR146C-AYGR146C-A 162 nt1.21□□□□□ -2.22
MSD1P15179 tF(GAA)BtF(GAA)B 73 nt1.2□□□□□ -2.22
MSD1P15179 tF(GAA)FtF(GAA)F 73 nt1.2□□□□□ -2.22
MSD1P15179 tF(GAA)GtF(GAA)G 73 nt1.2□□□□□ -2.22
MSD1P15179 tF(GAA)H1tF(GAA)H1 73 nt1.2□□□□□ -2.22
MSD1P15179 tF(GAA)H2tF(GAA)H2 73 nt1.2□□□□□ -2.22
MSD1P15179 tF(GAA)MtF(GAA)M 73 nt1.2□□□□□ -2.22
MSD1P15179 tF(GAA)P1tF(GAA)P1 73 nt1.2□□□□□ -2.22
MSD1P15179 tF(GAA)P2tF(GAA)P2 73 nt1.2□□□□□ -2.22
MSD1P15179 YIL071W-AYIL071W-A 477 nt1.2□□□□□ -2.22
MSD1P15179 UTP20YBL004W 7482 nt1.19□□□□□ -2.22
MSD1P15179 ULP2YIL031W 3105 nt1.18□□□□□ -2.22
MSD1P15179 YJR029WYJR029W 5268 nt1.18□□□□□ -2.22
MSD1P15179 YPR137C-BYPR137C-B 5268 nt1.18□□□□□ -2.22
MSD1P15179 GLG1YKR058W 1851 nt1.16□□□□□ -2.22
MSD1P15179 SCC2YDR180W 4482 nt1.15□□□□□ -2.23
MSD1P15179 NST1YNL091W 3723 nt1.15□□□□□ -2.23
MSD1P15179 SEC1YDR164C 2175 nt1.14□□□□□ -2.23
MSD1P15179 YBR072C-AYBR072C-A 162 nt1.14□□□□□ -2.23
MSD1P15179 PMP2YEL017C-A 132 nt1.11□□□□□ -2.23
MSD1P15179 VAM6YDL077C 3150 nt1.1□□□□□ -2.23
MSD1P15179 MYO1YHR023W 5787 nt1.1□□□□□ -2.23
MSD1P15179 DOP1YDR141C 5097 nt1.09□□□□□ -2.23
MSD1P15179 BEM2YER155C 6504 nt1.09□□□□□ -2.23
MSD1P15179 LTE1YAL024C 4308 nt1.08□□□□□ -2.24
MSD1P15179 BIR1YJR089W 2865 nt1.08□□□□□ -2.24
MSD1P15179 BUD3YCL014W 4911 nt1.07□□□□□ -2.24
MSD1P15179 YPR117WYPR117W 7470 nt1.07□□□□□ -2.24
MSD1P15179 YLL006W-AYLL006W-A 177 nt1.06□□□□□ -2.24
MSD1P15179 NNF2YGR089W 2811 nt1.05□□□□□ -2.24
MSD1P15179 YIL142C-AYIL142C-A 333 nt1.04□□□□□ -2.24
MSD1P15179 YNL103W-AYNL103W-A 90 nt1.04□□□□□ -2.24
MSD1P15179 snR61snR61 90 nt1.03□□□□□ -2.24
MSD1P15179 RKR1YMR247C 4689 nt1.01□□□□□ -2.25
MSD1P15179 TFB5YDR079C-A 219 nt1.01□□□□□ -2.25
MSD1P15179 YNL266WYNL266W 420 nt1□□□□□ -2.25
MSD1P15179 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
MSD1P15179 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
MSD1P15179 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
MSD1P15179 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
MSD1P15179 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms