Protein–RNA interactions for Protein: O94742

SEM1, 26S proteasome complex subunit SEM1, yeastyeast

Predictions only

Length 89 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEM1O94742 tT(AGU)DtT(AGU)D 73 nt0.67□□□□□ -2.3
SEM1O94742 tT(AGU)HtT(AGU)H 73 nt0.67□□□□□ -2.3
SEM1O94742 tT(AGU)I1tT(AGU)I1 73 nt0.67□□□□□ -2.3
SEM1O94742 tT(AGU)I2tT(AGU)I2 73 nt0.67□□□□□ -2.3
SEM1O94742 tT(AGU)JtT(AGU)J 73 nt0.67□□□□□ -2.3
SEM1O94742 tT(AGU)N1tT(AGU)N1 73 nt0.67□□□□□ -2.3
SEM1O94742 tT(AGU)N2tT(AGU)N2 73 nt0.67□□□□□ -2.3
SEM1O94742 tT(AGU)O1tT(AGU)O1 73 nt0.67□□□□□ -2.3
SEM1O94742 tT(AGU)O2tT(AGU)O2 73 nt0.67□□□□□ -2.3
SEM1O94742 YBR182C-AYBR182C-A 195 nt0.67□□□□□ -2.3
SEM1O94742 UTP10YJL109C 5310 nt0.66□□□□□ -2.3
SEM1O94742 tF(GAA)BtF(GAA)B 73 nt0.65□□□□□ -2.31
SEM1O94742 tF(GAA)FtF(GAA)F 73 nt0.65□□□□□ -2.31
SEM1O94742 tF(GAA)GtF(GAA)G 73 nt0.65□□□□□ -2.31
SEM1O94742 tF(GAA)H1tF(GAA)H1 73 nt0.65□□□□□ -2.31
SEM1O94742 tF(GAA)H2tF(GAA)H2 73 nt0.65□□□□□ -2.31
SEM1O94742 tF(GAA)MtF(GAA)M 73 nt0.65□□□□□ -2.31
SEM1O94742 tF(GAA)P1tF(GAA)P1 73 nt0.65□□□□□ -2.31
SEM1O94742 tF(GAA)P2tF(GAA)P2 73 nt0.65□□□□□ -2.31
SEM1O94742 YOL155W-AYOL155W-A 135 nt0.65□□□□□ -2.31
SEM1O94742 YOR345CYOR345C 351 nt0.65□□□□□ -2.31
SEM1O94742 PET111YMR257C 2403 nt0.65□□□□□ -2.31
SEM1O94742 YER053C-AYER053C-A 114 nt0.64□□□□□ -2.31
SEM1O94742 YML099W-AYML099W-A 330 nt0.64□□□□□ -2.31
SEM1O94742 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
SEM1O94742 YCR038W-AYCR038W-A 126 nt0.63□□□□□ -2.31
SEM1O94742 YLR041WYLR041W 321 nt0.63□□□□□ -2.31
SEM1O94742 YOR192C-BYOR192C-B 5313 nt0.62□□□□□ -2.31
SEM1O94742 BEM3YPL115C 3387 nt0.62□□□□□ -2.31
SEM1O94742 YIL002W-AYIL002W-A 210 nt0.61□□□□□ -2.31
SEM1O94742 YDR366CYDR366C 399 nt0.6□□□□□ -2.31
SEM1O94742 YGL041CYGL041C 204 nt0.6□□□□□ -2.31
SEM1O94742 YGL188C-AYGL188C-A 141 nt0.6□□□□□ -2.31
SEM1O94742 PAU12YGR294W 363 nt0.59□□□□□ -2.31
SEM1O94742 YHR131W-AYHR131W-A 246 nt0.59□□□□□ -2.31
SEM1O94742 YSP1YHR155W 3687 nt0.58□□□□□ -2.32
SEM1O94742 NNF2YGR089W 2811 nt0.57□□□□□ -2.32
SEM1O94742 ABF2YMR072W 552 nt0.57□□□□□ -2.32
SEM1O94742 UTP8YGR128C 2142 nt0.56□□□□□ -2.32
SEM1O94742 TRS65YGR166W 1683 nt0.56□□□□□ -2.32
SEM1O94742 SNU13YEL026W 381 nt0.55□□□□□ -2.32
SEM1O94742 SBH1YER087C-B 249 nt0.55□□□□□ -2.32
SEM1O94742 APQ12YIL040W 417 nt0.55□□□□□ -2.32
SEM1O94742 YKL145W-AYKL145W-A 93 nt0.54□□□□□ -2.32
SEM1O94742 MLP1YKR095W 5628 nt0.54□□□□□ -2.32
SEM1O94742 YBR131C-AYBR131C-A 90 nt0.52□□□□□ -2.33
SEM1O94742 YLL006W-AYLL006W-A 177 nt0.51□□□□□ -2.33
SEM1O94742 YDR371C-AYDR371C-A 105 nt0.49□□□□□ -2.33
SEM1O94742 RPS26AYGL189C 360 nt0.49□□□□□ -2.33
SEM1O94742 QCR9YGR183C 201 nt0.49□□□□□ -2.33
SEM1O94742 YLR232WYLR232W 348 nt0.49□□□□□ -2.33
SEM1O94742 ULP2YIL031W 3105 nt0.48□□□□□ -2.33
SEM1O94742 YOL014WYOL014W 375 nt0.47□□□□□ -2.33
SEM1O94742 NIP1YMR309C 2439 nt0.46□□□□□ -2.34
SEM1O94742 YOR302WYOR302W 78 nt0.46□□□□□ -2.34
SEM1O94742 snR80snR80 171 nt0.45□□□□□ -2.34
SEM1O94742 ORC3YLL004W 1851 nt0.45□□□□□ -2.34
SEM1O94742 snR8snR8 190 nt0.44□□□□□ -2.34
SEM1O94742 YBR072C-AYBR072C-A 162 nt0.44□□□□□ -2.34
SEM1O94742 AI1Q0050 2505 nt0.44□□□□□ -2.34
SEM1O94742 TAH1YCR060W 336 nt0.42□□□□□ -2.34
SEM1O94742 PRP39YML046W 1890 nt0.41□□□□□ -2.34
SEM1O94742 FMP27YLR454W 7887 nt0.4□□□□□ -2.35
SEM1O94742 BUL2YML111W 2763 nt0.39□□□□□ -2.35
SEM1O94742 YNL097C-BYNL097C-B 123 nt0.38□□□□□ -2.35
SEM1O94742 BIR1YJR089W 2865 nt0.37□□□□□ -2.35
SEM1O94742 YDR544CYDR544C 429 nt0.37□□□□□ -2.35
SEM1O94742 YEL014CYEL014C 306 nt0.37□□□□□ -2.35
SEM1O94742 YJL182CYJL182C 318 nt0.36□□□□□ -2.35
SEM1O94742 YBL039C-AYBL039C-A 84 nt0.35□□□□□ -2.35
SEM1O94742 GLG1YKR058W 1851 nt0.35□□□□□ -2.35
SEM1O94742 SDH6YDR379C-A 240 nt0.34□□□□□ -2.36
SEM1O94742 RCO1YMR075W 2055 nt0.33□□□□□ -2.36
SEM1O94742 YMR158W-BYMR158W-B 321 nt0.33□□□□□ -2.36
SEM1O94742 YGL182CYGL182C 324 nt0.32□□□□□ -2.36
SEM1O94742 IQG1YPL242C 4488 nt0.31□□□□□ -2.36
SEM1O94742 CSE1YGL238W 2883 nt0.3□□□□□ -2.36
SEM1O94742 YEL073CYEL073C 324 nt0.3□□□□□ -2.36
SEM1O94742 ESP1YGR098C 4893 nt0.29□□□□□ -2.36
SEM1O94742 YOR186C-AYOR186C-A 210 nt0.29□□□□□ -2.36
SEM1O94742 COG6YNL041C 2520 nt0.29□□□□□ -2.36
SEM1O94742 MLP2YIL149C 5040 nt0.29□□□□□ -2.36
SEM1O94742 YBL100W-BYBL100W-B 5313 nt0.28□□□□□ -2.36
SEM1O94742 YOL013W-AYOL013W-A 192 nt0.25□□□□□ -2.37
SEM1O94742 MYO1YHR023W 5787 nt0.25□□□□□ -2.37
SEM1O94742 YOR381W-AYOR381W-A 168 nt0.24□□□□□ -2.37
SEM1O94742 snR52snR52 92 nt0.24□□□□□ -2.37
SEM1O94742 THO2YNL139C 4794 nt0.24□□□□□ -2.37
SEM1O94742 YOR314W-AYOR314W-A 111 nt0.23□□□□□ -2.37
SEM1O94742 snR46snR46 197 nt0.21□□□□□ -2.38
SEM1O94742 YLR342W-AYLR342W-A 174 nt0.2□□□□□ -2.38
SEM1O94742 YER078W-AYER078W-A 165 nt0.18□□□□□ -2.38
SEM1O94742 YDR406W-AYDR406W-A 246 nt0.17□□□□□ -2.38
SEM1O94742 YOR170WYOR170W 306 nt0.17□□□□□ -2.38
SEM1O94742 RPM2YML091C 3609 nt0.17□□□□□ -2.38
SEM1O94742 YBR099CYBR099C 384 nt0.16□□□□□ -2.38
SEM1O94742 YDR210WYDR210W 228 nt0.12□□□□□ -2.39
SEM1O94742 tM(CAU)Q2tM(CAU)Q2 78 nt0.12□□□□□ -2.39
SEM1O94742 YNL054W-BYNL054W-B 5250 nt0.11□□□□□ -2.39
SEM1O94742 YMR046W-AYMR046W-A 129 nt0.1□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 11 ms