Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SH3TC1Q8TE82 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
SH3TC1Q8TE82 AC087499.1-201ENST00000418141 1075 ntBASIC25.08■■□□□ 1.6
SH3TC1Q8TE82 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.6
SH3TC1Q8TE82 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
SH3TC1Q8TE82 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.08■■□□□ 1.6
SH3TC1Q8TE82 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.08■■□□□ 1.6
SH3TC1Q8TE82 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.08■■□□□ 1.6
SH3TC1Q8TE82 AC026471.5-201ENST00000615068 467 ntBASIC25.08■■□□□ 1.6
SH3TC1Q8TE82 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.07■■□□□ 1.6
SH3TC1Q8TE82 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 KRT8P20-201ENST00000423953 1409 ntBASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 FAM210CP-201ENST00000445714 574 ntBASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
SH3TC1Q8TE82 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 AP003071.4-201ENST00000562276 1284 ntBASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 CD177P1-201ENST00000606252 935 ntBASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SH3TC1Q8TE82 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 AC005229.4-201ENST00000610085 2198 ntBASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 AC004264.1-201ENST00000608354 794 ntBASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 AC133561.5-201ENST00000635547 218 ntBASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SH3TC1Q8TE82 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SH3TC1Q8TE82 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 FAM197Y1-201ENST00000421178 764 ntBASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SH3TC1Q8TE82 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SH3TC1Q8TE82 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms