Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.33■□□□□ 0.68
KRT78Q8N1N4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 AC099778.1-201ENST00000568593 1911 ntBASIC19.32■□□□□ 0.68
KRT78Q8N1N4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KRT78Q8N1N4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 TSPY6P-201ENST00000448518 926 ntBASIC19.31■□□□□ 0.68
KRT78Q8N1N4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 AC090192.1-201ENST00000517740 490 ntBASIC19.31■□□□□ 0.68
KRT78Q8N1N4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.31■□□□□ 0.68
KRT78Q8N1N4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 AC073130.3-201ENST00000624389 2278 ntBASIC19.31■□□□□ 0.68
KRT78Q8N1N4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT78Q8N1N4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.3■□□□□ 0.68
KRT78Q8N1N4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
KRT78Q8N1N4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 KRT8P20-201ENST00000423953 1409 ntBASIC19.29■□□□□ 0.68
KRT78Q8N1N4 KRT8P17-201ENST00000453110 1448 ntBASIC19.29■□□□□ 0.68
KRT78Q8N1N4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 HLA-G-202ENST00000376815 851 ntBASIC19.29■□□□□ 0.68
KRT78Q8N1N4 HLA-G-203ENST00000376818 1127 ntBASIC19.29■□□□□ 0.68
KRT78Q8N1N4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 MIR4758-201ENST00000577688 71 ntBASIC19.29■□□□□ 0.68
KRT78Q8N1N4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 AL031963.3-201ENST00000606441 850 ntBASIC19.29■□□□□ 0.68
KRT78Q8N1N4 AC092118.2-201ENST00000613495 667 ntBASIC19.29■□□□□ 0.68
KRT78Q8N1N4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT78Q8N1N4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT78Q8N1N4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms