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Protein–RNA interactions for Protein: Q05471
SWR1, Helicase SWR1, yeast
Predictions only
Length
1,514 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
SWR1
Q05471
YBL107W-A
YBL107W-A
105 nt
-1.39
□□□□□ -2.63
SWR1
Q05471
YOR011W-A
YOR011W-A
207 nt
-1.39
□□□□□ -2.63
SWR1
Q05471
snR51
snR51
107 nt
-1.39
□□□□□ -2.63
SWR1
Q05471
BER1
YLR412W
825 nt
-1.4
□□□□□ -2.63
SWR1
Q05471
YML007C-A
YML007C-A
111 nt
-1.4
□□□□□ -2.63
SWR1
Q05471
YMR158W-B
YMR158W-B
321 nt
-1.4
□□□□□ -2.63
SWR1
Q05471
ATG16
YMR159C
453 nt
-1.4
□□□□□ -2.63
SWR1
Q05471
EST1
YLR233C
2100 nt
-1.4
□□□□□ -2.63
SWR1
Q05471
YDL007C-A
YDL007C-A
258 nt
-1.41
□□□□□ -2.64
SWR1
Q05471
SDH7
YDR511W
402 nt
-1.41
□□□□□ -2.64
SWR1
Q05471
YLR041W
YLR041W
321 nt
-1.42
□□□□□ -2.64
SWR1
Q05471
snR5
snR5
204 nt
-1.43
□□□□□ -2.64
SWR1
Q05471
RPF1
YHR088W
888 nt
-1.43
□□□□□ -2.64
SWR1
Q05471
YLR282C
YLR282C
342 nt
-1.43
□□□□□ -2.64
SWR1
Q05471
YGL015C
YGL015C
393 nt
-1.46
□□□□□ -2.64
SWR1
Q05471
YIL066W-A
YIL066W-A
444 nt
-1.47
□□□□□ -2.64
SWR1
Q05471
MRPL32
YCR003W
552 nt
-1.5
□□□□□ -2.65
SWR1
Q05471
RPL22B
YFL034C-A
369 nt
-1.5
□□□□□ -2.65
SWR1
Q05471
TAR1
YLR154W-C
375 nt
-1.5
□□□□□ -2.65
SWR1
Q05471
YPL182C
YPL182C
384 nt
-1.5
□□□□□ -2.65
SWR1
Q05471
YPR039W
YPR039W
336 nt
-1.5
□□□□□ -2.65
SWR1
Q05471
SGF11
YPL047W
300 nt
-1.5
□□□□□ -2.65
SWR1
Q05471
YPR092W
YPR092W
306 nt
-1.51
□□□□□ -2.65
SWR1
Q05471
POP7
YBR167C
423 nt
-1.52
□□□□□ -2.65
SWR1
Q05471
APQ13
YJL075C
417 nt
-1.53
□□□□□ -2.65
SWR1
Q05471
BLI1
YKL061W
342 nt
-1.54
□□□□□ -2.66
SWR1
Q05471
snR34
snR34
203 nt
-1.55
□□□□□ -2.66
SWR1
Q05471
YER079W
YER079W
633 nt
-1.56
□□□□□ -2.66
SWR1
Q05471
YER135C
YER135C
393 nt
-1.56
□□□□□ -2.66
SWR1
Q05471
YCR100C
YCR100C
951 nt
-1.57
□□□□□ -2.66
SWR1
Q05471
YGL230C
YGL230C
444 nt
-1.57
□□□□□ -2.66
SWR1
Q05471
HMLALPHA2
YCL067C
633 nt
-1.58
□□□□□ -2.66
SWR1
Q05471
YCR001W
YCR001W
315 nt
-1.58
□□□□□ -2.66
SWR1
Q05471
MATALPHA2
YCR039C
633 nt
-1.58
□□□□□ -2.66
SWR1
Q05471
HMRA2
YCR096C
360 nt
-1.58
□□□□□ -2.66
SWR1
Q05471
YGR270C-A
YGR270C-A
219 nt
-1.58
□□□□□ -2.66
SWR1
Q05471
AGA2
YGL032C
264 nt
-1.59
□□□□□ -2.66
SWR1
Q05471
YHL041W
YHL041W
450 nt
-1.59
□□□□□ -2.66
SWR1
Q05471
YPT6
YLR262C
648 nt
-1.59
□□□□□ -2.66
SWR1
Q05471
SNU13
YEL026W
381 nt
-1.6
□□□□□ -2.67
SWR1
Q05471
YMR254C
YMR254C
309 nt
-1.6
□□□□□ -2.67
SWR1
Q05471
YBR072C-A
YBR072C-A
162 nt
-1.6
□□□□□ -2.67
SWR1
Q05471
HUR1
YGL168W
333 nt
-1.61
□□□□□ -2.67
SWR1
Q05471
YNL058C
YNL058C
951 nt
-1.63
□□□□□ -2.67
SWR1
Q05471
ZEO1
YOL109W
342 nt
-1.63
□□□□□ -2.67
SWR1
Q05471
YML100W-A
YML100W-A
174 nt
-1.64
□□□□□ -2.67
SWR1
Q05471
PAU9
YBL108C-A
129 nt
-1.64
□□□□□ -2.67
SWR1
Q05471
YFL063W
YFL063W
456 nt
-1.65
□□□□□ -2.67
SWR1
Q05471
YDR366C
YDR366C
399 nt
-1.66
□□□□□ -2.68
SWR1
Q05471
FYV7
YLR068W
456 nt
-1.67
□□□□□ -2.68
SWR1
Q05471
MND1
YGL183C
660 nt
-1.69
□□□□□ -2.68
SWR1
Q05471
YIL002W-A
YIL002W-A
210 nt
-1.7
□□□□□ -2.68
SWR1
Q05471
YLR217W
YLR217W
324 nt
-1.71
□□□□□ -2.68
SWR1
Q05471
CMC1
YKL137W
336 nt
-1.73
□□□□□ -2.69
SWR1
Q05471
YLR334C
YLR334C
381 nt
-1.74
□□□□□ -2.69
SWR1
Q05471
YGR025W
YGR025W
303 nt
-1.75
□□□□□ -2.69
SWR1
Q05471
YJL182C
YJL182C
318 nt
-1.76
□□□□□ -2.69
SWR1
Q05471
YBL062W
YBL062W
381 nt
-1.76
□□□□□ -2.69
SWR1
Q05471
CUP1-1
YHR053C
186 nt
-1.76
□□□□□ -2.69
SWR1
Q05471
CUP1-2
YHR055C
186 nt
-1.76
□□□□□ -2.69
SWR1
Q05471
SKI7
YOR076C
2244 nt
-1.77
□□□□□ -2.69
SWR1
Q05471
YDL011C
YDL011C
324 nt
-1.78
□□□□□ -2.69
SWR1
Q05471
YJL020W-A
YJL020W-A
258 nt
-1.78
□□□□□ -2.69
SWR1
Q05471
YPR002C-A
YPR002C-A
198 nt
-1.78
□□□□□ -2.69
SWR1
Q05471
YGL123C-A
YGL123C-A
231 nt
-1.79
□□□□□ -2.7
SWR1
Q05471
AIM29
YKR074W
468 nt
-1.79
□□□□□ -2.7
SWR1
Q05471
YHR130C
YHR130C
336 nt
-1.8
□□□□□ -2.7
SWR1
Q05471
YNL303W
YNL303W
348 nt
-1.8
□□□□□ -2.7
SWR1
Q05471
YLR264C-A
YLR264C-A
117 nt
-1.81
□□□□□ -2.7
SWR1
Q05471
TSC3
YBR058C-A
243 nt
-1.81
□□□□□ -2.7
SWR1
Q05471
snR9
snR9
187 nt
-1.81
□□□□□ -2.7
SWR1
Q05471
YER084W-A
YER084W-A
513 nt
-1.81
□□□□□ -2.7
SWR1
Q05471
YER175W-A
YER175W-A
165 nt
-1.81
□□□□□ -2.7
SWR1
Q05471
YGL182C
YGL182C
324 nt
-1.82
□□□□□ -2.7
SWR1
Q05471
YHR007C-A
YHR007C-A
216 nt
-1.82
□□□□□ -2.7
SWR1
Q05471
SCEI
Q0160
708 nt
-1.83
□□□□□ -2.7
SWR1
Q05471
YOR161W-A
YOR161W-A
81 nt
-1.83
□□□□□ -2.7
SWR1
Q05471
tP(UGG)Q
tP(UGG)Q
72 nt
-1.84
□□□□□ -2.7
SWR1
Q05471
YKL100W-A
YKL100W-A
90 nt
-1.84
□□□□□ -2.7
SWR1
Q05471
YDR354C-A
YDR354C-A
144 nt
-1.86
□□□□□ -2.71
SWR1
Q05471
YOR192C-C
YOR192C-C
237 nt
-1.86
□□□□□ -2.71
SWR1
Q05471
SDH6
YDR379C-A
240 nt
-1.87
□□□□□ -2.71
SWR1
Q05471
YAR029W
YAR029W
225 nt
-1.87
□□□□□ -2.71
SWR1
Q05471
YPL229W
YPL229W
621 nt
-1.88
□□□□□ -2.71
SWR1
Q05471
snR49
snR49
165 nt
-1.89
□□□□□ -2.71
SWR1
Q05471
YIL032C
YIL032C
357 nt
-1.91
□□□□□ -2.71
SWR1
Q05471
tY(GUA)Q
tY(GUA)Q
84 nt
-1.91
□□□□□ -2.71
SWR1
Q05471
YPL068C
YPL068C
882 nt
-1.91
□□□□□ -2.71
SWR1
Q05471
YDR426C
YDR426C
378 nt
-1.91
□□□□□ -2.72
SWR1
Q05471
YLR154W-F
YLR154W-F
141 nt
-1.93
□□□□□ -2.72
SWR1
Q05471
YKL083W
YKL083W
615 nt
-1.94
□□□□□ -2.72
SWR1
Q05471
YBL071C
YBL071C
309 nt
-1.97
□□□□□ -2.73
SWR1
Q05471
YPR010C-A
YPR010C-A
219 nt
-2
□□□□□ -2.73
SWR1
Q05471
YJR087W
YJR087W
351 nt
-2.01
□□□□□ -2.73
SWR1
Q05471
YKL044W
YKL044W
321 nt
-2.01
□□□□□ -2.73
SWR1
Q05471
YEL020C-B
YEL020C-B
198 nt
-2.01
□□□□□ -2.73
SWR1
Q05471
APQ12
YIL040W
417 nt
-2.01
□□□□□ -2.73
SWR1
Q05471
YFR009W-A
YFR009W-A
258 nt
-2.03
□□□□□ -2.73
SWR1
Q05471
YGL052W
YGL052W
306 nt
-2.04
□□□□□ -2.74
SWR1
Q05471
YIL029C
YIL029C
429 nt
-2.05
□□□□□ -2.74
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Retrieved 100 of 7,029 protein–RNA pairs in 49.2 ms