Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 VIK1YPL253C 1944 nt0.87□□□□□ -2.27
VTI1Q04338 WAR1YML076C 2835 nt0.87□□□□□ -2.27
VTI1Q04338 CUL3YGR003W 2235 nt0.87□□□□□ -2.27
VTI1Q04338 YGL149WYGL149W 306 nt0.87□□□□□ -2.27
VTI1Q04338 YFR012W-AYFR012W-A 87 nt0.86□□□□□ -2.27
VTI1Q04338 YHL042WYHL042W 453 nt0.86□□□□□ -2.27
VTI1Q04338 YMR031W-AYMR031W-A 327 nt0.86□□□□□ -2.27
VTI1Q04338 YGR069WYGR069W 336 nt0.85□□□□□ -2.27
VTI1Q04338 PRP16YKR086W 3216 nt0.85□□□□□ -2.27
VTI1Q04338 RAD61YDR014W 1944 nt0.85□□□□□ -2.27
VTI1Q04338 YDL073WYDL073W 2955 nt0.84□□□□□ -2.27
VTI1Q04338 YNL146WYNL146W 303 nt0.84□□□□□ -2.27
VTI1Q04338 YNL277W-AYNL277W-A 189 nt0.83□□□□□ -2.28
VTI1Q04338 PAN2YGL094C 3348 nt0.83□□□□□ -2.28
VTI1Q04338 LTE1YAL024C 4308 nt0.82□□□□□ -2.28
VTI1Q04338 YDR354C-AYDR354C-A 144 nt0.82□□□□□ -2.28
VTI1Q04338 OLI1Q0130 231 nt0.82□□□□□ -2.28
VTI1Q04338 YNL211CYNL211C 261 nt0.82□□□□□ -2.28
VTI1Q04338 CSE2YNR010W 450 nt0.82□□□□□ -2.28
VTI1Q04338 YOR231C-AYOR231C-A 201 nt0.82□□□□□ -2.28
VTI1Q04338 PTP2YOR208W 2253 nt0.81□□□□□ -2.28
VTI1Q04338 snR74snR74 88 nt0.81□□□□□ -2.28
VTI1Q04338 YIR044CYIR044C 186 nt0.81□□□□□ -2.28
VTI1Q04338 YPR159C-AYPR159C-A 102 nt0.81□□□□□ -2.28
VTI1Q04338 BFR2YDR299W 1605 nt0.81□□□□□ -2.28
VTI1Q04338 HMRA2YCR096C 360 nt0.8□□□□□ -2.28
VTI1Q04338 YDL196WYDL196W 330 nt0.8□□□□□ -2.28
VTI1Q04338 RPS27BYHR021C 249 nt0.8□□□□□ -2.28
VTI1Q04338 YDL185C-AYDL185C-A 228 nt0.79□□□□□ -2.28
VTI1Q04338 ISD11YER048W-A 285 nt0.79□□□□□ -2.28
VTI1Q04338 RPL39YJL189W 156 nt0.79□□□□□ -2.28
VTI1Q04338 YEL020C-BYEL020C-B 198 nt0.78□□□□□ -2.28
VTI1Q04338 YGL041CYGL041C 204 nt0.78□□□□□ -2.28
VTI1Q04338 YMR321CYMR321C 318 nt0.78□□□□□ -2.28
VTI1Q04338 SEC1YDR164C 2175 nt0.78□□□□□ -2.28
VTI1Q04338 snR65snR65 100 nt0.77□□□□□ -2.29
VTI1Q04338 YLR120W-AYLR120W-A 102 nt0.77□□□□□ -2.29
VTI1Q04338 CMC4YMR194C-B 222 nt0.77□□□□□ -2.29
VTI1Q04338 IES4YOR189W 351 nt0.77□□□□□ -2.29
VTI1Q04338 YGL052WYGL052W 306 nt0.76□□□□□ -2.29
VTI1Q04338 YLL019W-AYLL019W-A 93 nt0.76□□□□□ -2.29
VTI1Q04338 YNL028WYNL028W 318 nt0.76□□□□□ -2.29
VTI1Q04338 ASE1YOR058C 2658 nt0.76□□□□□ -2.29
VTI1Q04338 YJL197C-AYJL197C-A 282 nt0.75□□□□□ -2.29
VTI1Q04338 YMR172C-AYMR172C-A 384 nt0.75□□□□□ -2.29
VTI1Q04338 YOR218CYOR218C 420 nt0.75□□□□□ -2.29
VTI1Q04338 YPR092WYPR092W 306 nt0.74□□□□□ -2.29
VTI1Q04338 YER181CYER181C 324 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
VTI1Q04338 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
VTI1Q04338 YPL152W-AYPL152W-A 99 nt0.72□□□□□ -2.29
VTI1Q04338 NOP9YJL010C 2001 nt0.72□□□□□ -2.29
VTI1Q04338 YJL026C-AYJL026C-A 222 nt0.71□□□□□ -2.3
VTI1Q04338 YOR282WYOR282W 321 nt0.71□□□□□ -2.3
VTI1Q04338 YIL142C-AYIL142C-A 333 nt0.7□□□□□ -2.3
VTI1Q04338 YOR161W-AYOR161W-A 81 nt0.7□□□□□ -2.3
VTI1Q04338 COY1YKL179C 2040 nt0.69□□□□□ -2.3
VTI1Q04338 snR80snR80 171 nt0.69□□□□□ -2.3
VTI1Q04338 YHR063W-AYHR063W-A 336 nt0.69□□□□□ -2.3
VTI1Q04338 YML099W-AYML099W-A 330 nt0.68□□□□□ -2.3
VTI1Q04338 YOR345CYOR345C 351 nt0.68□□□□□ -2.3
VTI1Q04338 YPL044CYPL044C 549 nt0.68□□□□□ -2.3
VTI1Q04338 NPR2YEL062W 1848 nt0.68□□□□□ -2.3
VTI1Q04338 PAA1YDR071C 576 nt0.67□□□□□ -2.3
VTI1Q04338 YIL134C-AYIL134C-A 204 nt0.67□□□□□ -2.3
VTI1Q04338 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
VTI1Q04338 YAL067W-AYAL067W-A 228 nt0.66□□□□□ -2.3
VTI1Q04338 YOR008C-AYOR008C-A 225 nt0.66□□□□□ -2.3
VTI1Q04338 YCR018C-AYCR018C-A 255 nt0.65□□□□□ -2.31
VTI1Q04338 YCR022CYCR022C 345 nt0.65□□□□□ -2.31
VTI1Q04338 PMP1YCR024C-A 123 nt0.65□□□□□ -2.31
VTI1Q04338 tF(GAA)QtF(GAA)Q 75 nt0.65□□□□□ -2.31
VTI1Q04338 RPS30BYOR182C 192 nt0.65□□□□□ -2.31
VTI1Q04338 YBR131C-AYBR131C-A 90 nt0.65□□□□□ -2.31
VTI1Q04338 tN(GUU)QtN(GUU)Q 71 nt0.64□□□□□ -2.31
VTI1Q04338 CHS6YJL099W 2241 nt0.63□□□□□ -2.31
VTI1Q04338 YOR072W-BYOR072W-B 162 nt0.63□□□□□ -2.31
VTI1Q04338 snR190snR190 190 nt0.63□□□□□ -2.31
VTI1Q04338 snR49snR49 165 nt0.63□□□□□ -2.31
VTI1Q04338 YOR192C-BYOR192C-B 5313 nt0.62□□□□□ -2.31
VTI1Q04338 YML002WYML002W 2214 nt0.62□□□□□ -2.31
VTI1Q04338 YCR038W-AYCR038W-A 126 nt0.62□□□□□ -2.31
VTI1Q04338 PAM16YJL104W 450 nt0.62□□□□□ -2.31
VTI1Q04338 YMR307C-AYMR307C-A 195 nt0.62□□□□□ -2.31
VTI1Q04338 YOR302WYOR302W 78 nt0.62□□□□□ -2.31
VTI1Q04338 IQG1YPL242C 4488 nt0.62□□□□□ -2.31
VTI1Q04338 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
VTI1Q04338 UBP3YER151C 2739 nt0.62□□□□□ -2.31
VTI1Q04338 YER053C-AYER053C-A 114 nt0.61□□□□□ -2.31
VTI1Q04338 ULI1YFR026C 510 nt0.61□□□□□ -2.31
VTI1Q04338 YIR030W-AYIR030W-A 384 nt0.61□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 87.7 ms