Protein–RNA interactions for Protein: Q03433

VPS71, Vacuolar protein sorting-associated protein 71, yeastyeast

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS71Q03433 YAL067W-AYAL067W-A 228 nt0.07□□□□□ -2.4
VPS71Q03433 YAR047CYAR047C 321 nt0.07□□□□□ -2.4
VPS71Q03433 YHL046W-AYHL046W-A 327 nt0.06□□□□□ -2.4
VPS71Q03433 YML007C-AYML007C-A 111 nt0.06□□□□□ -2.4
VPS71Q03433 YLR399W-AYLR399W-A 105 nt0.05□□□□□ -2.4
VPS71Q03433 YOR011W-AYOR011W-A 207 nt0.05□□□□□ -2.4
VPS71Q03433 ORC3YLL004W 1851 nt0.04□□□□□ -2.4
VPS71Q03433 YDR371C-AYDR371C-A 105 nt0.04□□□□□ -2.4
VPS71Q03433 COX12YLR038C 252 nt0.04□□□□□ -2.4
VPS71Q03433 FYV7YLR068W 456 nt0.04□□□□□ -2.4
VPS71Q03433 YNL122CYNL122C 348 nt0.04□□□□□ -2.4
VPS71Q03433 CSE1YGL238W 2883 nt0.04□□□□□ -2.4
VPS71Q03433 YDR426CYDR426C 378 nt0.03□□□□□ -2.4
VPS71Q03433 ECL1YGR146C 636 nt0.03□□□□□ -2.4
VPS71Q03433 MRPL50YNR022C 420 nt0.03□□□□□ -2.4
VPS71Q03433 YOR053WYOR053W 342 nt0.03□□□□□ -2.4
VPS71Q03433 YOR345CYOR345C 351 nt0.03□□□□□ -2.4
VPS71Q03433 RCO1YMR075W 2055 nt0.02□□□□□ -2.41
VPS71Q03433 ULI1YFR026C 510 nt0.02□□□□□ -2.41
VPS71Q03433 YLR101CYLR101C 396 nt0.02□□□□□ -2.41
VPS71Q03433 SGF11YPL047W 300 nt0.02□□□□□ -2.41
VPS71Q03433 HMRA2YCR096C 360 nt0.01□□□□□ -2.41
VPS71Q03433 YDL185C-AYDL185C-A 228 nt0.01□□□□□ -2.41
VPS71Q03433 YER006C-AYER006C-A 318 nt0.01□□□□□ -2.41
VPS71Q03433 RPS26AYGL189C 360 nt0.01□□□□□ -2.41
VPS71Q03433 TAR1YLR154W-C 375 nt0.01□□□□□ -2.41
VPS71Q03433 YLR456WYLR456W 615 nt0.01□□□□□ -2.41
VPS71Q03433 LEE1YPL054W 906 nt0.01□□□□□ -2.41
VPS71Q03433 YPL225WYPL225W 441 nt0.01□□□□□ -2.41
VPS71Q03433 MYO1YHR023W 5787 nt0□□□□□ -2.41
VPS71Q03433 YLR334CYLR334C 381 nt0□□□□□ -2.41
VPS71Q03433 TOM22YNL131W 459 nt0□□□□□ -2.41
VPS71Q03433 snR190snR190 190 nt0□□□□□ -2.41
VPS71Q03433 tN(GUU)QtN(GUU)Q 71 nt-0.01□□□□□ -2.41
VPS71Q03433 YAR053WYAR053W 297 nt-0.01□□□□□ -2.41
VPS71Q03433 YPL068CYPL068C 882 nt-0.01□□□□□ -2.41
VPS71Q03433 snR41snR41 95 nt-0.01□□□□□ -2.41
VPS71Q03433 NNF2YGR089W 2811 nt-0.02□□□□□ -2.41
VPS71Q03433 TFB5YDR079C-A 219 nt-0.02□□□□□ -2.41
VPS71Q03433 YCR018C-AYCR018C-A 255 nt-0.03□□□□□ -2.41
VPS71Q03433 PCC1YKR095W-A 267 nt-0.03□□□□□ -2.41
VPS71Q03433 YNL146WYNL146W 303 nt-0.03□□□□□ -2.41
VPS71Q03433 YJL120WYJL120W 324 nt-0.04□□□□□ -2.42
VPS71Q03433 RPS25BYLR333C 327 nt-0.04□□□□□ -2.42
VPS71Q03433 YMR307C-AYMR307C-A 195 nt-0.04□□□□□ -2.42
VPS71Q03433 NIP1YMR309C 2439 nt-0.06□□□□□ -2.42
VPS71Q03433 SSS1YDR086C 243 nt-0.06□□□□□ -2.42
VPS71Q03433 YNL303WYNL303W 348 nt-0.06□□□□□ -2.42
VPS71Q03433 YOR186C-AYOR186C-A 210 nt-0.06□□□□□ -2.42
VPS71Q03433 YLR232WYLR232W 348 nt-0.07□□□□□ -2.42
VPS71Q03433 YOL013W-BYOL013W-B 291 nt-0.07□□□□□ -2.42
VPS71Q03433 YJL113WYJL113W 4647 nt-0.08□□□□□ -2.42
VPS71Q03433 YHR007C-AYHR007C-A 216 nt-0.08□□□□□ -2.42
VPS71Q03433 COY1YKL179C 2040 nt-0.08□□□□□ -2.42
VPS71Q03433 snR46snR46 197 nt-0.09□□□□□ -2.42
VPS71Q03433 GLG1YKR058W 1851 nt-0.1□□□□□ -2.42
VPS71Q03433 YGR164WYGR164W 336 nt-0.1□□□□□ -2.43
VPS71Q03433 YHR138CYHR138C 345 nt-0.1□□□□□ -2.43
VPS71Q03433 VPS20YMR077C 666 nt-0.1□□□□□ -2.43
VPS71Q03433 YDR210WYDR210W 228 nt-0.11□□□□□ -2.43
VPS71Q03433 YEL050W-AYEL050W-A 192 nt-0.11□□□□□ -2.43
VPS71Q03433 YPR092WYPR092W 306 nt-0.11□□□□□ -2.43
VPS71Q03433 YKU70YMR284W 1809 nt-0.11□□□□□ -2.43
VPS71Q03433 YCR022CYCR022C 345 nt-0.12□□□□□ -2.43
VPS71Q03433 CSN9YDR179C 489 nt-0.12□□□□□ -2.43
VPS71Q03433 YHR131W-AYHR131W-A 246 nt-0.12□□□□□ -2.43
VPS71Q03433 YKL136WYKL136W 399 nt-0.12□□□□□ -2.43
VPS71Q03433 SOV1YMR066W 2697 nt-0.13□□□□□ -2.43
VPS71Q03433 RPL35AYDL191W 363 nt-0.13□□□□□ -2.43
VPS71Q03433 YLL006W-AYLL006W-A 177 nt-0.13□□□□□ -2.43
VPS71Q03433 YLR282CYLR282C 342 nt-0.13□□□□□ -2.43
VPS71Q03433 YLR434CYLR434C 384 nt-0.13□□□□□ -2.43
VPS71Q03433 YDL158CYDL158C 309 nt-0.14□□□□□ -2.43
VPS71Q03433 YDR354C-AYDR354C-A 144 nt-0.14□□□□□ -2.43
VPS71Q03433 YAR029WYAR029W 225 nt-0.14□□□□□ -2.43
VPS71Q03433 YEL073CYEL073C 324 nt-0.15□□□□□ -2.43
VPS71Q03433 ATP19YOL077W-A 207 nt-0.16□□□□□ -2.44
VPS71Q03433 PRM3YPL192C 402 nt-0.19□□□□□ -2.44
VPS71Q03433 YOR161W-AYOR161W-A 81 nt-0.2□□□□□ -2.44
VPS71Q03433 YLR406C-AYLR406C-A 150 nt-0.21□□□□□ -2.44
VPS71Q03433 snR128snR128 126 nt-0.21□□□□□ -2.44
VPS71Q03433 snR8snR8 190 nt-0.22□□□□□ -2.44
VPS71Q03433 SNU13YEL026W 381 nt-0.24□□□□□ -2.45
VPS71Q03433 YGL123C-AYGL123C-A 231 nt-0.24□□□□□ -2.45
VPS71Q03433 YLR041WYLR041W 321 nt-0.24□□□□□ -2.45
VPS71Q03433 HTB2YBL002W 396 nt-0.24□□□□□ -2.45
VPS71Q03433 YJL007CYJL007C 315 nt-0.25□□□□□ -2.45
VPS71Q03433 YDR366CYDR366C 399 nt-0.26□□□□□ -2.45
VPS71Q03433 YEL020C-BYEL020C-B 198 nt-0.26□□□□□ -2.45
VPS71Q03433 RPS27BYHR021C 249 nt-0.26□□□□□ -2.45
VPS71Q03433 YIL115W-AYIL115W-A 372 nt-0.26□□□□□ -2.45
VPS71Q03433 BLI1YKL061W 342 nt-0.26□□□□□ -2.45
VPS71Q03433 YPL205CYPL205C 345 nt-0.26□□□□□ -2.45
VPS71Q03433 snR189snR189 189 nt-0.26□□□□□ -2.45
VPS71Q03433 YER137W-AYER137W-A 306 nt-0.28□□□□□ -2.45
VPS71Q03433 YKL100W-AYKL100W-A 90 nt-0.28□□□□□ -2.45
VPS71Q03433 CSE2YNR010W 450 nt-0.28□□□□□ -2.45
VPS71Q03433 YBR072C-AYBR072C-A 162 nt-0.28□□□□□ -2.45
VPS71Q03433 SEC10YLR166C 2616 nt-0.28□□□□□ -2.45
VPS71Q03433 YPR170W-AYPR170W-A 186 nt-0.29□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms