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Protein–RNA interactions for Protein: P89113
DDR2, Protein DDR2, yeast
Predictions only
Length
61 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
DDR2
P89113
COX7
YMR256C
183 nt
-2.4
□□□□□ -2.79
DDR2
P89113
BER1
YLR412W
825 nt
-2.41
□□□□□ -2.8
DDR2
P89113
YDR290W
YDR290W
330 nt
-2.42
□□□□□ -2.8
DDR2
P89113
YGR228W
YGR228W
345 nt
-2.43
□□□□□ -2.8
DDR2
P89113
SPO12
YHR152W
522 nt
-2.43
□□□□□ -2.8
DDR2
P89113
YPL261C
YPL261C
309 nt
-2.43
□□□□□ -2.8
DDR2
P89113
CMS1
YLR003C
876 nt
-2.44
□□□□□ -2.8
DDR2
P89113
YOR366W
YOR366W
354 nt
-2.44
□□□□□ -2.8
DDR2
P89113
RUF20
RUF20
443 nt
-2.45
□□□□□ -2.8
DDR2
P89113
RSM18
YER050C
417 nt
-2.47
□□□□□ -2.8
DDR2
P89113
snR189
snR189
189 nt
-2.48
□□□□□ -2.81
DDR2
P89113
YER135C
YER135C
393 nt
-2.49
□□□□□ -2.81
DDR2
P89113
SCEI
Q0160
708 nt
-2.49
□□□□□ -2.81
DDR2
P89113
YPR016W-A
YPR016W-A
261 nt
-2.5
□□□□□ -2.81
DDR2
P89113
tT(UGU)Q1
tT(UGU)Q1
76 nt
-2.51
□□□□□ -2.81
DDR2
P89113
snR5
snR5
204 nt
-2.52
□□□□□ -2.81
DDR2
P89113
CUP1-1
YHR053C
186 nt
-2.52
□□□□□ -2.81
DDR2
P89113
CUP1-2
YHR055C
186 nt
-2.52
□□□□□ -2.81
DDR2
P89113
POL32
YJR043C
1053 nt
-2.54
□□□□□ -2.82
DDR2
P89113
snR72
snR72
98 nt
-2.55
□□□□□ -2.82
DDR2
P89113
YOR192C-C
YOR192C-C
237 nt
-2.55
□□□□□ -2.82
DDR2
P89113
snR74
snR74
88 nt
-2.56
□□□□□ -2.82
DDR2
P89113
RPL22B
YFL034C-A
369 nt
-2.56
□□□□□ -2.82
DDR2
P89113
SGF11
YPL047W
300 nt
-2.56
□□□□□ -2.82
DDR2
P89113
PET20
YPL159C
762 nt
-2.56
□□□□□ -2.82
DDR2
P89113
SRB7
YDR308C
423 nt
-2.57
□□□□□ -2.82
DDR2
P89113
YJL077W-A
YJL077W-A
87 nt
-2.59
□□□□□ -2.82
DDR2
P89113
CBS1
YDL069C
690 nt
-2.6
□□□□□ -2.83
DDR2
P89113
DFG10
YIL049W
762 nt
-2.6
□□□□□ -2.83
DDR2
P89113
YJL086C
YJL086C
369 nt
-2.6
□□□□□ -2.83
DDR2
P89113
IRC16
YPR038W
360 nt
-2.61
□□□□□ -2.83
DDR2
P89113
YPR010C-A
YPR010C-A
219 nt
-2.62
□□□□□ -2.83
DDR2
P89113
snR24
snR24
89 nt
-2.62
□□□□□ -2.83
DDR2
P89113
MND1
YGL183C
660 nt
-2.63
□□□□□ -2.83
DDR2
P89113
YJR140W-A
YJR140W-A
150 nt
-2.63
□□□□□ -2.83
DDR2
P89113
YOR011W-A
YOR011W-A
207 nt
-2.64
□□□□□ -2.83
DDR2
P89113
YGL052W
YGL052W
306 nt
-2.65
□□□□□ -2.83
DDR2
P89113
HUR1
YGL168W
333 nt
-2.66
□□□□□ -2.84
DDR2
P89113
VPS20
YMR077C
666 nt
-2.66
□□□□□ -2.84
DDR2
P89113
RDS3
YPR094W
324 nt
-2.68
□□□□□ -2.84
DDR2
P89113
CWC23
YGL128C
852 nt
-2.69
□□□□□ -2.84
DDR2
P89113
CDC65
tQ(CUG)M
72 nt
-2.7
□□□□□ -2.84
DDR2
P89113
YGL015C
YGL015C
393 nt
-2.71
□□□□□ -2.84
DDR2
P89113
YBL107W-A
YBL107W-A
105 nt
-2.71
□□□□□ -2.84
DDR2
P89113
YER053C-A
YER053C-A
114 nt
-2.72
□□□□□ -2.84
DDR2
P89113
YNL058C
YNL058C
951 nt
-2.72
□□□□□ -2.84
DDR2
P89113
YNL162W-A
YNL162W-A
219 nt
-2.72
□□□□□ -2.84
DDR2
P89113
YDR366C
YDR366C
399 nt
-2.73
□□□□□ -2.85
DDR2
P89113
YHR125W
YHR125W
306 nt
-2.73
□□□□□ -2.85
DDR2
P89113
JLP2
YMR132C
627 nt
-2.75
□□□□□ -2.85
DDR2
P89113
snR81
snR81
201 nt
-2.77
□□□□□ -2.85
DDR2
P89113
THG1
YGR024C
714 nt
-2.77
□□□□□ -2.85
DDR2
P89113
SDH6
YDR379C-A
240 nt
-2.78
□□□□□ -2.85
DDR2
P89113
YGL239C
YGL239C
315 nt
-2.78
□□□□□ -2.85
DDR2
P89113
ACF4
YJR083C
930 nt
-2.79
□□□□□ -2.86
DDR2
P89113
YKL202W
YKL202W
582 nt
-2.8
□□□□□ -2.86
DDR2
P89113
YPT6
YLR262C
648 nt
-2.8
□□□□□ -2.86
DDR2
P89113
BNS1
YGR230W
414 nt
-2.82
□□□□□ -2.86
DDR2
P89113
YMR304C-A
YMR304C-A
351 nt
-2.82
□□□□□ -2.86
DDR2
P89113
VPS63
YLR261C
327 nt
-2.83
□□□□□ -2.86
DDR2
P89113
POP7
YBR167C
423 nt
-2.83
□□□□□ -2.86
DDR2
P89113
YDR543C
YDR543C
300 nt
-2.84
□□□□□ -2.86
DDR2
P89113
YAL068W-A
YAL068W-A
255 nt
-2.84
□□□□□ -2.86
DDR2
P89113
YPL229W
YPL229W
621 nt
-2.84
□□□□□ -2.86
DDR2
P89113
snR51
snR51
107 nt
-2.84
□□□□□ -2.86
DDR2
P89113
YOR293C-A
YOR293C-A
150 nt
-2.85
□□□□□ -2.87
DDR2
P89113
YOL106W
YOL106W
354 nt
-2.88
□□□□□ -2.87
DDR2
P89113
snR39B
snR39B
96 nt
-2.88
□□□□□ -2.87
DDR2
P89113
YER188C-A
YER188C-A
300 nt
-2.9
□□□□□ -2.87
DDR2
P89113
YGR240C-A
YGR240C-A
201 nt
-2.9
□□□□□ -2.87
DDR2
P89113
ZEO1
YOL109W
342 nt
-2.9
□□□□□ -2.87
DDR2
P89113
snR77
snR77
88 nt
-2.92
□□□□□ -2.88
DDR2
P89113
EAF6
YJR082C
342 nt
-2.92
□□□□□ -2.88
DDR2
P89113
AIM29
YKR074W
468 nt
-2.92
□□□□□ -2.88
DDR2
P89113
YBR285W
YBR285W
435 nt
-2.94
□□□□□ -2.88
DDR2
P89113
snR59
snR59
78 nt
-2.95
□□□□□ -2.88
DDR2
P89113
LSM4
YER112W
564 nt
-2.95
□□□□□ -2.88
DDR2
P89113
YKL044W
YKL044W
321 nt
-2.95
□□□□□ -2.88
DDR2
P89113
YGR025W
YGR025W
303 nt
-2.96
□□□□□ -2.88
DDR2
P89113
FYV7
YLR068W
456 nt
-2.96
□□□□□ -2.88
DDR2
P89113
YMR315W-A
YMR315W-A
108 nt
-2.96
□□□□□ -2.88
DDR2
P89113
YOR364W
YOR364W
369 nt
-2.98
□□□□□ -2.89
DDR2
P89113
HMLALPHA2
YCL067C
633 nt
-2.99
□□□□□ -2.89
DDR2
P89113
MATALPHA2
YCR039C
633 nt
-2.99
□□□□□ -2.89
DDR2
P89113
HMRA2
YCR096C
360 nt
-2.99
□□□□□ -2.89
DDR2
P89113
YNL205C
YNL205C
423 nt
-2.99
□□□□□ -2.89
DDR2
P89113
YOR121C
YOR121C
306 nt
-2.99
□□□□□ -2.89
DDR2
P89113
YJR087W
YJR087W
351 nt
-3
□□□□□ -2.89
DDR2
P89113
CSE2
YNR010W
450 nt
-3
□□□□□ -2.89
DDR2
P89113
YFR009W-A
YFR009W-A
258 nt
-3.01
□□□□□ -2.89
DDR2
P89113
YBL039C-A
YBL039C-A
84 nt
-3.04
□□□□□ -2.9
DDR2
P89113
YDR354C-A
YDR354C-A
144 nt
-3.05
□□□□□ -2.9
DDR2
P89113
YCR001W
YCR001W
315 nt
-3.07
□□□□□ -2.9
DDR2
P89113
YDR220C
YDR220C
294 nt
-3.07
□□□□□ -2.9
DDR2
P89113
RPS27B
YHR021C
249 nt
-3.08
□□□□□ -2.9
DDR2
P89113
ILM1
YJR118C
612 nt
-3.08
□□□□□ -2.9
DDR2
P89113
YGL230C
YGL230C
444 nt
-3.09
□□□□□ -2.9
DDR2
P89113
YKL083W
YKL083W
615 nt
-3.1
□□□□□ -2.91
DDR2
P89113
YKL100W-A
YKL100W-A
90 nt
-3.1
□□□□□ -2.91
DDR2
P89113
YMR193C-A
YMR193C-A
387 nt
-3.1
□□□□□ -2.91
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Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms