Protein–RNA interactions for Protein: P89113

DDR2, Protein DDR2, yeastyeast

Predictions only

Length 61 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDR2P89113 COX7YMR256C 183 nt-2.4□□□□□ -2.79
DDR2P89113 BER1YLR412W 825 nt-2.41□□□□□ -2.8
DDR2P89113 YDR290WYDR290W 330 nt-2.42□□□□□ -2.8
DDR2P89113 YGR228WYGR228W 345 nt-2.43□□□□□ -2.8
DDR2P89113 SPO12YHR152W 522 nt-2.43□□□□□ -2.8
DDR2P89113 YPL261CYPL261C 309 nt-2.43□□□□□ -2.8
DDR2P89113 CMS1YLR003C 876 nt-2.44□□□□□ -2.8
DDR2P89113 YOR366WYOR366W 354 nt-2.44□□□□□ -2.8
DDR2P89113 RUF20RUF20 443 nt-2.45□□□□□ -2.8
DDR2P89113 RSM18YER050C 417 nt-2.47□□□□□ -2.8
DDR2P89113 snR189snR189 189 nt-2.48□□□□□ -2.81
DDR2P89113 YER135CYER135C 393 nt-2.49□□□□□ -2.81
DDR2P89113 SCEIQ0160 708 nt-2.49□□□□□ -2.81
DDR2P89113 YPR016W-AYPR016W-A 261 nt-2.5□□□□□ -2.81
DDR2P89113 tT(UGU)Q1tT(UGU)Q1 76 nt-2.51□□□□□ -2.81
DDR2P89113 snR5snR5 204 nt-2.52□□□□□ -2.81
DDR2P89113 CUP1-1YHR053C 186 nt-2.52□□□□□ -2.81
DDR2P89113 CUP1-2YHR055C 186 nt-2.52□□□□□ -2.81
DDR2P89113 POL32YJR043C 1053 nt-2.54□□□□□ -2.82
DDR2P89113 snR72snR72 98 nt-2.55□□□□□ -2.82
DDR2P89113 YOR192C-CYOR192C-C 237 nt-2.55□□□□□ -2.82
DDR2P89113 snR74snR74 88 nt-2.56□□□□□ -2.82
DDR2P89113 RPL22BYFL034C-A 369 nt-2.56□□□□□ -2.82
DDR2P89113 SGF11YPL047W 300 nt-2.56□□□□□ -2.82
DDR2P89113 PET20YPL159C 762 nt-2.56□□□□□ -2.82
DDR2P89113 SRB7YDR308C 423 nt-2.57□□□□□ -2.82
DDR2P89113 YJL077W-AYJL077W-A 87 nt-2.59□□□□□ -2.82
DDR2P89113 CBS1YDL069C 690 nt-2.6□□□□□ -2.83
DDR2P89113 DFG10YIL049W 762 nt-2.6□□□□□ -2.83
DDR2P89113 YJL086CYJL086C 369 nt-2.6□□□□□ -2.83
DDR2P89113 IRC16YPR038W 360 nt-2.61□□□□□ -2.83
DDR2P89113 YPR010C-AYPR010C-A 219 nt-2.62□□□□□ -2.83
DDR2P89113 snR24snR24 89 nt-2.62□□□□□ -2.83
DDR2P89113 MND1YGL183C 660 nt-2.63□□□□□ -2.83
DDR2P89113 YJR140W-AYJR140W-A 150 nt-2.63□□□□□ -2.83
DDR2P89113 YOR011W-AYOR011W-A 207 nt-2.64□□□□□ -2.83
DDR2P89113 YGL052WYGL052W 306 nt-2.65□□□□□ -2.83
DDR2P89113 HUR1YGL168W 333 nt-2.66□□□□□ -2.84
DDR2P89113 VPS20YMR077C 666 nt-2.66□□□□□ -2.84
DDR2P89113 RDS3YPR094W 324 nt-2.68□□□□□ -2.84
DDR2P89113 CWC23YGL128C 852 nt-2.69□□□□□ -2.84
DDR2P89113 CDC65tQ(CUG)M 72 nt-2.7□□□□□ -2.84
DDR2P89113 YGL015CYGL015C 393 nt-2.71□□□□□ -2.84
DDR2P89113 YBL107W-AYBL107W-A 105 nt-2.71□□□□□ -2.84
DDR2P89113 YER053C-AYER053C-A 114 nt-2.72□□□□□ -2.84
DDR2P89113 YNL058CYNL058C 951 nt-2.72□□□□□ -2.84
DDR2P89113 YNL162W-AYNL162W-A 219 nt-2.72□□□□□ -2.84
DDR2P89113 YDR366CYDR366C 399 nt-2.73□□□□□ -2.85
DDR2P89113 YHR125WYHR125W 306 nt-2.73□□□□□ -2.85
DDR2P89113 JLP2YMR132C 627 nt-2.75□□□□□ -2.85
DDR2P89113 snR81snR81 201 nt-2.77□□□□□ -2.85
DDR2P89113 THG1YGR024C 714 nt-2.77□□□□□ -2.85
DDR2P89113 SDH6YDR379C-A 240 nt-2.78□□□□□ -2.85
DDR2P89113 YGL239CYGL239C 315 nt-2.78□□□□□ -2.85
DDR2P89113 ACF4YJR083C 930 nt-2.79□□□□□ -2.86
DDR2P89113 YKL202WYKL202W 582 nt-2.8□□□□□ -2.86
DDR2P89113 YPT6YLR262C 648 nt-2.8□□□□□ -2.86
DDR2P89113 BNS1YGR230W 414 nt-2.82□□□□□ -2.86
DDR2P89113 YMR304C-AYMR304C-A 351 nt-2.82□□□□□ -2.86
DDR2P89113 VPS63YLR261C 327 nt-2.83□□□□□ -2.86
DDR2P89113 POP7YBR167C 423 nt-2.83□□□□□ -2.86
DDR2P89113 YDR543CYDR543C 300 nt-2.84□□□□□ -2.86
DDR2P89113 YAL068W-AYAL068W-A 255 nt-2.84□□□□□ -2.86
DDR2P89113 YPL229WYPL229W 621 nt-2.84□□□□□ -2.86
DDR2P89113 snR51snR51 107 nt-2.84□□□□□ -2.86
DDR2P89113 YOR293C-AYOR293C-A 150 nt-2.85□□□□□ -2.87
DDR2P89113 YOL106WYOL106W 354 nt-2.88□□□□□ -2.87
DDR2P89113 snR39BsnR39B 96 nt-2.88□□□□□ -2.87
DDR2P89113 YER188C-AYER188C-A 300 nt-2.9□□□□□ -2.87
DDR2P89113 YGR240C-AYGR240C-A 201 nt-2.9□□□□□ -2.87
DDR2P89113 ZEO1YOL109W 342 nt-2.9□□□□□ -2.87
DDR2P89113 snR77snR77 88 nt-2.92□□□□□ -2.88
DDR2P89113 EAF6YJR082C 342 nt-2.92□□□□□ -2.88
DDR2P89113 AIM29YKR074W 468 nt-2.92□□□□□ -2.88
DDR2P89113 YBR285WYBR285W 435 nt-2.94□□□□□ -2.88
DDR2P89113 snR59snR59 78 nt-2.95□□□□□ -2.88
DDR2P89113 LSM4YER112W 564 nt-2.95□□□□□ -2.88
DDR2P89113 YKL044WYKL044W 321 nt-2.95□□□□□ -2.88
DDR2P89113 YGR025WYGR025W 303 nt-2.96□□□□□ -2.88
DDR2P89113 FYV7YLR068W 456 nt-2.96□□□□□ -2.88
DDR2P89113 YMR315W-AYMR315W-A 108 nt-2.96□□□□□ -2.88
DDR2P89113 YOR364WYOR364W 369 nt-2.98□□□□□ -2.89
DDR2P89113 HMLALPHA2YCL067C 633 nt-2.99□□□□□ -2.89
DDR2P89113 MATALPHA2YCR039C 633 nt-2.99□□□□□ -2.89
DDR2P89113 HMRA2YCR096C 360 nt-2.99□□□□□ -2.89
DDR2P89113 YNL205CYNL205C 423 nt-2.99□□□□□ -2.89
DDR2P89113 YOR121CYOR121C 306 nt-2.99□□□□□ -2.89
DDR2P89113 YJR087WYJR087W 351 nt-3□□□□□ -2.89
DDR2P89113 CSE2YNR010W 450 nt-3□□□□□ -2.89
DDR2P89113 YFR009W-AYFR009W-A 258 nt-3.01□□□□□ -2.89
DDR2P89113 YBL039C-AYBL039C-A 84 nt-3.04□□□□□ -2.9
DDR2P89113 YDR354C-AYDR354C-A 144 nt-3.05□□□□□ -2.9
DDR2P89113 YCR001WYCR001W 315 nt-3.07□□□□□ -2.9
DDR2P89113 YDR220CYDR220C 294 nt-3.07□□□□□ -2.9
DDR2P89113 RPS27BYHR021C 249 nt-3.08□□□□□ -2.9
DDR2P89113 ILM1YJR118C 612 nt-3.08□□□□□ -2.9
DDR2P89113 YGL230CYGL230C 444 nt-3.09□□□□□ -2.9
DDR2P89113 YKL083WYKL083W 615 nt-3.1□□□□□ -2.91
DDR2P89113 YKL100W-AYKL100W-A 90 nt-3.1□□□□□ -2.91
DDR2P89113 YMR193C-AYMR193C-A 387 nt-3.1□□□□□ -2.91
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms