Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 BRR2YER172C 6492 nt1.88□□□□□ -2.11
HDA1P53973 TRM3YDL112W 4311 nt1.88□□□□□ -2.11
HDA1P53973 MGA2YIR033W 3342 nt1.88□□□□□ -2.11
HDA1P53973 YJR039WYJR039W 3366 nt1.88□□□□□ -2.11
HDA1P53973 TTI1YKL033W 3117 nt1.88□□□□□ -2.11
HDA1P53973 EMC5YIL027C 426 nt1.88□□□□□ -2.11
HDA1P53973 YIL134C-AYIL134C-A 204 nt1.88□□□□□ -2.11
HDA1P53973 YDL206WYDL206W 2289 nt1.88□□□□□ -2.11
HDA1P53973 NUT1YGL151W 3399 nt1.87□□□□□ -2.11
HDA1P53973 YCR038W-AYCR038W-A 126 nt1.87□□□□□ -2.11
HDA1P53973 YOR102WYOR102W 351 nt1.87□□□□□ -2.11
HDA1P53973 LHS1YKL073W 2646 nt1.87□□□□□ -2.11
HDA1P53973 COX12YLR038C 252 nt1.86□□□□□ -2.11
HDA1P53973 HSL1YKL101W 4557 nt1.85□□□□□ -2.11
HDA1P53973 NUP192YJL039C 5052 nt1.84□□□□□ -2.11
HDA1P53973 YNL211CYNL211C 261 nt1.84□□□□□ -2.11
HDA1P53973 MMS4YBR098W 2076 nt1.83□□□□□ -2.12
HDA1P53973 DNF3YMR162C 4971 nt1.83□□□□□ -2.12
HDA1P53973 UFD2YDL190C 2886 nt1.82□□□□□ -2.12
HDA1P53973 YIL002W-AYIL002W-A 210 nt1.82□□□□□ -2.12
HDA1P53973 HUG1YML058W-A 207 nt1.82□□□□□ -2.12
HDA1P53973 YOR314W-AYOR314W-A 111 nt1.82□□□□□ -2.12
HDA1P53973 ALY2YJL084C 3141 nt1.82□□□□□ -2.12
HDA1P53973 YAL067W-AYAL067W-A 228 nt1.81□□□□□ -2.12
HDA1P53973 BPH1YCR032W 6504 nt1.81□□□□□ -2.12
HDA1P53973 SMC1YFL008W 3678 nt1.8□□□□□ -2.12
HDA1P53973 MDS3YGL197W 4464 nt1.8□□□□□ -2.12
HDA1P53973 PRP5YBR237W 2550 nt1.8□□□□□ -2.12
HDA1P53973 STF2YGR008C 255 nt1.8□□□□□ -2.12
HDA1P53973 MYO2YOR326W 4725 nt1.8□□□□□ -2.12
HDA1P53973 YLL054CYLL054C 2532 nt1.8□□□□□ -2.12
HDA1P53973 PAN2YGL094C 3348 nt1.79□□□□□ -2.12
HDA1P53973 SLX4YLR135W 2247 nt1.79□□□□□ -2.12
HDA1P53973 tT(UGU)HtT(UGU)H 72 nt1.79□□□□□ -2.12
HDA1P53973 SMC4YLR086W 4257 nt1.79□□□□□ -2.12
HDA1P53973 SKI3YPR189W 4299 nt1.79□□□□□ -2.12
HDA1P53973 RSM22YKL155C 1887 nt1.78□□□□□ -2.12
HDA1P53973 YJL022WYJL022W 309 nt1.77□□□□□ -2.13
HDA1P53973 PMD1YER132C 5262 nt1.77□□□□□ -2.13
HDA1P53973 YOR019WYOR019W 2193 nt1.76□□□□□ -2.13
HDA1P53973 TBS1YBR150C 3285 nt1.76□□□□□ -2.13
HDA1P53973 PKH3YDR466W 2697 nt1.75□□□□□ -2.13
HDA1P53973 VPS15YBR097W 4365 nt1.75□□□□□ -2.13
HDA1P53973 YAR009CYAR009C 3591 nt1.75□□□□□ -2.13
HDA1P53973 YGL123C-AYGL123C-A 231 nt1.74□□□□□ -2.13
HDA1P53973 UTP8YGR128C 2142 nt1.74□□□□□ -2.13
HDA1P53973 YKL100W-AYKL100W-A 90 nt1.74□□□□□ -2.13
HDA1P53973 CDC31YOR257W 486 nt1.74□□□□□ -2.13
HDA1P53973 POL5YEL055C 3069 nt1.74□□□□□ -2.13
HDA1P53973 CAT8YMR280C 4302 nt1.72□□□□□ -2.13
HDA1P53973 snR14snR14 160 nt1.72□□□□□ -2.13
HDA1P53973 YCL001W-BYCL001W-B 255 nt1.72□□□□□ -2.13
HDA1P53973 IRA1YBR140C 9279 nt1.72□□□□□ -2.13
HDA1P53973 YER053C-AYER053C-A 114 nt1.71□□□□□ -2.14
HDA1P53973 KCS1YDR017C 3153 nt1.71□□□□□ -2.14
HDA1P53973 MON2YNL297C 4911 nt1.71□□□□□ -2.14
HDA1P53973 YMR247W-AYMR247W-A 144 nt1.7□□□□□ -2.14
HDA1P53973 YFR012W-AYFR012W-A 87 nt1.69□□□□□ -2.14
HDA1P53973 SAC3YDR159W 3906 nt1.69□□□□□ -2.14
HDA1P53973 YLR419WYLR419W 4308 nt1.68□□□□□ -2.14
HDA1P53973 tL(UAA)QtL(UAA)Q 85 nt1.68□□□□□ -2.14
HDA1P53973 YLL020CYLL020C 306 nt1.68□□□□□ -2.14
HDA1P53973 YCS4YLR272C 3531 nt1.68□□□□□ -2.14
HDA1P53973 EAF1YDR359C 2949 nt1.68□□□□□ -2.14
HDA1P53973 YGL182CYGL182C 324 nt1.67□□□□□ -2.14
HDA1P53973 COX5BYIL111W 456 nt1.67□□□□□ -2.14
HDA1P53973 CHS1YNL192W 3396 nt1.67□□□□□ -2.14
HDA1P53973 BFR2YDR299W 1605 nt1.66□□□□□ -2.14
HDA1P53973 CHS6YJL099W 2241 nt1.66□□□□□ -2.14
HDA1P53973 YOR161W-AYOR161W-A 81 nt1.66□□□□□ -2.14
HDA1P53973 STO1YMR125W 2586 nt1.66□□□□□ -2.14
HDA1P53973 KAP122YGL016W 3246 nt1.66□□□□□ -2.14
HDA1P53973 CMC4YMR194C-B 222 nt1.65□□□□□ -2.15
HDA1P53973 MEC1YBR136W 7107 nt1.65□□□□□ -2.15
HDA1P53973 YNL284C-BYNL284C-B 5268 nt1.65□□□□□ -2.15
HDA1P53973 SET3YKR029C 2256 nt1.65□□□□□ -2.15
HDA1P53973 YLR282CYLR282C 342 nt1.64□□□□□ -2.15
HDA1P53973 YOR329W-AYOR329W-A 210 nt1.64□□□□□ -2.15
HDA1P53973 WAR1YML076C 2835 nt1.64□□□□□ -2.15
HDA1P53973 YML002WYML002W 2214 nt1.63□□□□□ -2.15
HDA1P53973 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
HDA1P53973 NOP9YJL010C 2001 nt1.62□□□□□ -2.15
HDA1P53973 APL3YBL037W 3078 nt1.61□□□□□ -2.15
HDA1P53973 tQ(UUG)E2tQ(UUG)E2 72 nt1.61□□□□□ -2.15
HDA1P53973 BST1YFL025C 3090 nt1.6□□□□□ -2.15
HDA1P53973 SWI4YER111C 3282 nt1.6□□□□□ -2.15
HDA1P53973 YGR130CYGR130C 2451 nt1.6□□□□□ -2.15
HDA1P53973 SSK2YNR031C 4740 nt1.59□□□□□ -2.15
HDA1P53973 RPL26BYGR034W 384 nt1.59□□□□□ -2.15
HDA1P53973 YBL039C-AYBL039C-A 84 nt1.59□□□□□ -2.15
HDA1P53973 TAH1YCR060W 336 nt1.58□□□□□ -2.16
HDA1P53973 YBR099CYBR099C 384 nt1.58□□□□□ -2.16
HDA1P53973 GEA2YEL022W 4380 nt1.58□□□□□ -2.16
HDA1P53973 YBR200W-AYBR200W-A 165 nt1.57□□□□□ -2.16
HDA1P53973 NUP145YGL092W 3954 nt1.56□□□□□ -2.16
HDA1P53973 SXM1YDR395W 2835 nt1.56□□□□□ -2.16
HDA1P53973 SEC21YNL287W 2808 nt1.56□□□□□ -2.16
HDA1P53973 YCR095W-AYCR095W-A 159 nt1.56□□□□□ -2.16
HDA1P53973 OST4YDL232W 111 nt1.56□□□□□ -2.16
HDA1P53973 YNL067W-BYNL067W-B 141 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 78.4 ms