Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 RAD9YDR217C 3930 nt1.17□□□□□ -2.22
CAF40P53829 AIM44YPL158C 2277 nt1.16□□□□□ -2.22
CAF40P53829 JLP2YMR132C 627 nt1.16□□□□□ -2.22
CAF40P53829 SPG3YDR504C 384 nt1.15□□□□□ -2.23
CAF40P53829 RSM22YKL155C 1887 nt1.14□□□□□ -2.23
CAF40P53829 YBR182C-AYBR182C-A 195 nt1.14□□□□□ -2.23
CAF40P53829 YKU70YMR284W 1809 nt1.13□□□□□ -2.23
CAF40P53829 YLL020CYLL020C 306 nt1.13□□□□□ -2.23
CAF40P53829 YOR072W-BYOR072W-B 162 nt1.13□□□□□ -2.23
CAF40P53829 OLI1Q0130 231 nt1.12□□□□□ -2.23
CAF40P53829 YJL026C-AYJL026C-A 222 nt1.12□□□□□ -2.23
CAF40P53829 EAF1YDR359C 2949 nt1.12□□□□□ -2.23
CAF40P53829 STB6YKL072W 2301 nt1.11□□□□□ -2.23
CAF40P53829 CDC25YLR310C 4770 nt1.11□□□□□ -2.23
CAF40P53829 YDL196WYDL196W 330 nt1.11□□□□□ -2.23
CAF40P53829 APQ12YIL040W 417 nt1.11□□□□□ -2.23
CAF40P53829 YNL211CYNL211C 261 nt1.11□□□□□ -2.23
CAF40P53829 YBR131C-AYBR131C-A 90 nt1.11□□□□□ -2.23
CAF40P53829 GEA2YEL022W 4380 nt1.11□□□□□ -2.23
CAF40P53829 YPR117WYPR117W 7470 nt1.11□□□□□ -2.23
CAF40P53829 WAR1YML076C 2835 nt1.11□□□□□ -2.23
CAF40P53829 MSH3YCR092C 3057 nt1.1□□□□□ -2.23
CAF40P53829 YOR345CYOR345C 351 nt1.1□□□□□ -2.23
CAF40P53829 NUP145YGL092W 3954 nt1.09□□□□□ -2.23
CAF40P53829 PAM16YJL104W 450 nt1.09□□□□□ -2.23
CAF40P53829 YBR200W-AYBR200W-A 165 nt1.09□□□□□ -2.23
CAF40P53829 NUP192YJL039C 5052 nt1.09□□□□□ -2.24
CAF40P53829 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
CAF40P53829 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
CAF40P53829 YNL097C-BYNL097C-B 123 nt1.08□□□□□ -2.24
CAF40P53829 RPL33BYOR234C 324 nt1.08□□□□□ -2.24
CAF40P53829 NUP157YER105C 4176 nt1.07□□□□□ -2.24
CAF40P53829 APL1YJR005W 2103 nt1.07□□□□□ -2.24
CAF40P53829 BLI1YKL061W 342 nt1.07□□□□□ -2.24
CAF40P53829 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
CAF40P53829 PAA1YDR071C 576 nt1.06□□□□□ -2.24
CAF40P53829 YFR012W-AYFR012W-A 87 nt1.06□□□□□ -2.24
CAF40P53829 YIL134C-AYIL134C-A 204 nt1.06□□□□□ -2.24
CAF40P53829 CMC4YMR194C-B 222 nt1.06□□□□□ -2.24
CAF40P53829 SEC3YER008C 4011 nt1.05□□□□□ -2.24
CAF40P53829 SMC1YFL008W 3678 nt1.04□□□□□ -2.24
CAF40P53829 YDL185C-AYDL185C-A 228 nt1.04□□□□□ -2.24
CAF40P53829 ISD11YER048W-A 285 nt1.04□□□□□ -2.24
CAF40P53829 YAL067W-AYAL067W-A 228 nt1.04□□□□□ -2.24
CAF40P53829 YMR046W-AYMR046W-A 129 nt1.04□□□□□ -2.24
CAF40P53829 ASE1YOR058C 2658 nt1.04□□□□□ -2.24
CAF40P53829 NOP9YJL010C 2001 nt1.04□□□□□ -2.24
CAF40P53829 tM(CAU)Q1tM(CAU)Q1 76 nt1.03□□□□□ -2.24
CAF40P53829 CLU1YMR012W 3834 nt1.03□□□□□ -2.24
CAF40P53829 RPS30BYOR182C 192 nt1.03□□□□□ -2.24
CAF40P53829 SCC2YDR180W 4482 nt1.03□□□□□ -2.25
CAF40P53829 COX12YLR038C 252 nt1.02□□□□□ -2.25
CAF40P53829 CDC31YOR257W 486 nt1.02□□□□□ -2.25
CAF40P53829 SPT7YBR081C 3999 nt1.02□□□□□ -2.25
CAF40P53829 ULI1YFR026C 510 nt1.01□□□□□ -2.25
CAF40P53829 YDR406W-AYDR406W-A 246 nt1□□□□□ -2.25
CAF40P53829 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
CAF40P53829 COY1YKL179C 2040 nt0.99□□□□□ -2.25
CAF40P53829 tH(GUG)E1tH(GUG)E1 72 nt0.99□□□□□ -2.25
CAF40P53829 tH(GUG)E2tH(GUG)E2 72 nt0.99□□□□□ -2.25
CAF40P53829 tH(GUG)G1tH(GUG)G1 72 nt0.99□□□□□ -2.25
CAF40P53829 tH(GUG)G2tH(GUG)G2 72 nt0.99□□□□□ -2.25
CAF40P53829 tH(GUG)HtH(GUG)H 72 nt0.99□□□□□ -2.25
CAF40P53829 tH(GUG)KtH(GUG)K 72 nt0.99□□□□□ -2.25
CAF40P53829 tH(GUG)MtH(GUG)M 72 nt0.99□□□□□ -2.25
CAF40P53829 NST1YNL091W 3723 nt0.99□□□□□ -2.25
CAF40P53829 TTI1YKL033W 3117 nt0.98□□□□□ -2.25
CAF40P53829 KAP120YPL125W 3099 nt0.98□□□□□ -2.25
CAF40P53829 BEM2YER155C 6504 nt0.98□□□□□ -2.25
CAF40P53829 YCR038W-AYCR038W-A 126 nt0.98□□□□□ -2.25
CAF40P53829 YOR161W-AYOR161W-A 81 nt0.98□□□□□ -2.25
CAF40P53829 YPL044CYPL044C 549 nt0.98□□□□□ -2.25
CAF40P53829 HAL9YOL089C 3093 nt0.97□□□□□ -2.25
CAF40P53829 BUD3YCL014W 4911 nt0.96□□□□□ -2.26
CAF40P53829 BFR2YDR299W 1605 nt0.96□□□□□ -2.26
CAF40P53829 ROM2YLR371W 4071 nt0.95□□□□□ -2.26
CAF40P53829 YCR018C-AYCR018C-A 255 nt0.95□□□□□ -2.26
CAF40P53829 YGL123C-AYGL123C-A 231 nt0.95□□□□□ -2.26
CAF40P53829 YEL014CYEL014C 306 nt0.94□□□□□ -2.26
CAF40P53829 YER053C-AYER053C-A 114 nt0.94□□□□□ -2.26
CAF40P53829 YLR282CYLR282C 342 nt0.94□□□□□ -2.26
CAF40P53829 snR46snR46 197 nt0.94□□□□□ -2.26
CAF40P53829 RPL26BYGR034W 384 nt0.93□□□□□ -2.26
CAF40P53829 YJL150WYJL150W 303 nt0.93□□□□□ -2.26
CAF40P53829 YNL198CYNL198C 303 nt0.93□□□□□ -2.26
CAF40P53829 snR190snR190 190 nt0.93□□□□□ -2.26
CAF40P53829 PMP1YCR024C-A 123 nt0.92□□□□□ -2.26
CAF40P53829 YIL002W-AYIL002W-A 210 nt0.91□□□□□ -2.26
CAF40P53829 YJL182CYJL182C 318 nt0.91□□□□□ -2.26
CAF40P53829 RKR1YMR247C 4689 nt0.91□□□□□ -2.26
CAF40P53829 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
CAF40P53829 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
CAF40P53829 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
CAF40P53829 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
CAF40P53829 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
CAF40P53829 snR52snR52 92 nt0.9□□□□□ -2.27
CAF40P53829 tV(UAC)BtV(UAC)B 74 nt0.89□□□□□ -2.27
CAF40P53829 tV(UAC)DtV(UAC)D 74 nt0.89□□□□□ -2.27
CAF40P53829 COX5BYIL111W 456 nt0.89□□□□□ -2.27
CAF40P53829 YNL337WYNL337W 255 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms