Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 COX12YLR038C 252 nt1.73□□□□□ -2.13
SPC98P53540 RPS30BYOR182C 192 nt1.73□□□□□ -2.13
SPC98P53540 SPO24YPR036W-A 204 nt1.73□□□□□ -2.13
SPC98P53540 YLR419WYLR419W 4308 nt1.73□□□□□ -2.13
SPC98P53540 RTP1YMR185W 2946 nt1.73□□□□□ -2.13
SPC98P53540 LHS1YKL073W 2646 nt1.72□□□□□ -2.13
SPC98P53540 SBE22YHR103W 2559 nt1.72□□□□□ -2.13
SPC98P53540 ADR1YDR216W 3972 nt1.72□□□□□ -2.13
SPC98P53540 PAA1YDR071C 576 nt1.71□□□□□ -2.14
SPC98P53540 ALY2YJL084C 3141 nt1.71□□□□□ -2.14
SPC98P53540 MON2YNL297C 4911 nt1.71□□□□□ -2.14
SPC98P53540 POL5YEL055C 3069 nt1.7□□□□□ -2.14
SPC98P53540 YCS4YLR272C 3531 nt1.7□□□□□ -2.14
SPC98P53540 VPS15YBR097W 4365 nt1.7□□□□□ -2.14
SPC98P53540 KCS1YDR017C 3153 nt1.69□□□□□ -2.14
SPC98P53540 MDS3YGL197W 4464 nt1.69□□□□□ -2.14
SPC98P53540 TTI1YKL033W 3117 nt1.68□□□□□ -2.14
SPC98P53540 EMC5YIL027C 426 nt1.68□□□□□ -2.14
SPC98P53540 RAD50YNL250W 3939 nt1.68□□□□□ -2.14
SPC98P53540 YDL206WYDL206W 2289 nt1.68□□□□□ -2.14
SPC98P53540 APL1YJR005W 2103 nt1.67□□□□□ -2.14
SPC98P53540 DNF3YMR162C 4971 nt1.67□□□□□ -2.14
SPC98P53540 PAN2YGL094C 3348 nt1.66□□□□□ -2.14
SPC98P53540 YCR038W-AYCR038W-A 126 nt1.66□□□□□ -2.14
SPC98P53540 tT(UGU)HtT(UGU)H 72 nt1.66□□□□□ -2.14
SPC98P53540 YMR247W-AYMR247W-A 144 nt1.66□□□□□ -2.14
SPC98P53540 YOR102WYOR102W 351 nt1.66□□□□□ -2.14
SPC98P53540 CAT8YMR280C 4302 nt1.65□□□□□ -2.14
SPC98P53540 YHL015W-AYHL015W-A 84 nt1.65□□□□□ -2.15
SPC98P53540 YIL002W-AYIL002W-A 210 nt1.65□□□□□ -2.15
SPC98P53540 CDC31YOR257W 486 nt1.65□□□□□ -2.15
SPC98P53540 SMC4YLR086W 4257 nt1.65□□□□□ -2.15
SPC98P53540 YAL067W-AYAL067W-A 228 nt1.64□□□□□ -2.15
SPC98P53540 BRR2YER172C 6492 nt1.63□□□□□ -2.15
SPC98P53540 YFR012W-AYFR012W-A 87 nt1.63□□□□□ -2.15
SPC98P53540 SKI3YPR189W 4299 nt1.63□□□□□ -2.15
SPC98P53540 YJL022WYJL022W 309 nt1.62□□□□□ -2.15
SPC98P53540 YOR314W-AYOR314W-A 111 nt1.62□□□□□ -2.15
SPC98P53540 UFD2YDL190C 2886 nt1.62□□□□□ -2.15
SPC98P53540 PKH3YDR466W 2697 nt1.61□□□□□ -2.15
SPC98P53540 CHS1YNL192W 3396 nt1.61□□□□□ -2.15
SPC98P53540 SLX4YLR135W 2247 nt1.6□□□□□ -2.15
SPC98P53540 YNL211CYNL211C 261 nt1.59□□□□□ -2.15
SPC98P53540 MMS4YBR098W 2076 nt1.59□□□□□ -2.16
SPC98P53540 YLR422WYLR422W 5799 nt1.59□□□□□ -2.16
SPC98P53540 PRP5YBR237W 2550 nt1.58□□□□□ -2.16
SPC98P53540 tL(UAA)QtL(UAA)Q 85 nt1.58□□□□□ -2.16
SPC98P53540 YCL001W-BYCL001W-B 255 nt1.58□□□□□ -2.16
SPC98P53540 PMD1YER132C 5262 nt1.58□□□□□ -2.16
SPC98P53540 YER053C-AYER053C-A 114 nt1.57□□□□□ -2.16
SPC98P53540 YAR009CYAR009C 3591 nt1.57□□□□□ -2.16
SPC98P53540 YLL054CYLL054C 2532 nt1.57□□□□□ -2.16
SPC98P53540 snR14snR14 160 nt1.56□□□□□ -2.16
SPC98P53540 KAP122YGL016W 3246 nt1.56□□□□□ -2.16
SPC98P53540 YGL123C-AYGL123C-A 231 nt1.54□□□□□ -2.16
SPC98P53540 BFR2YDR299W 1605 nt1.54□□□□□ -2.16
SPC98P53540 FIG2YCR089W 4830 nt1.54□□□□□ -2.16
SPC98P53540 MSH3YCR092C 3057 nt1.53□□□□□ -2.16
SPC98P53540 EAF1YDR359C 2949 nt1.53□□□□□ -2.16
SPC98P53540 RSM22YKL155C 1887 nt1.53□□□□□ -2.16
SPC98P53540 YOR019WYOR019W 2193 nt1.53□□□□□ -2.16
SPC98P53540 YOR329W-AYOR329W-A 210 nt1.53□□□□□ -2.16
SPC98P53540 YGL182CYGL182C 324 nt1.52□□□□□ -2.17
SPC98P53540 YOR161W-AYOR161W-A 81 nt1.52□□□□□ -2.17
SPC98P53540 MEC1YBR136W 7107 nt1.52□□□□□ -2.17
SPC98P53540 TRM732YMR259C 4263 nt1.52□□□□□ -2.17
SPC98P53540 COX5BYIL111W 456 nt1.51□□□□□ -2.17
SPC98P53540 STB6YKL072W 2301 nt1.5□□□□□ -2.17
SPC98P53540 YLL020CYLL020C 306 nt1.5□□□□□ -2.17
SPC98P53540 YLR282CYLR282C 342 nt1.5□□□□□ -2.17
SPC98P53540 YKL100W-AYKL100W-A 90 nt1.49□□□□□ -2.17
SPC98P53540 SET3YKR029C 2256 nt1.49□□□□□ -2.17
SPC98P53540 YBL039C-AYBL039C-A 84 nt1.48□□□□□ -2.17
SPC98P53540 CHS6YJL099W 2241 nt1.48□□□□□ -2.17
SPC98P53540 BST1YFL025C 3090 nt1.48□□□□□ -2.17
SPC98P53540 YGR130CYGR130C 2451 nt1.47□□□□□ -2.17
SPC98P53540 YIL071W-AYIL071W-A 477 nt1.47□□□□□ -2.17
SPC98P53540 CMC4YMR194C-B 222 nt1.47□□□□□ -2.17
SPC98P53540 YBR178WYBR178W 375 nt1.47□□□□□ -2.17
SPC98P53540 STO1YMR125W 2586 nt1.47□□□□□ -2.17
SPC98P53540 NOP9YJL010C 2001 nt1.46□□□□□ -2.18
SPC98P53540 OST4YDL232W 111 nt1.46□□□□□ -2.18
SPC98P53540 YLR041WYLR041W 321 nt1.46□□□□□ -2.18
SPC98P53540 SMC1YFL008W 3678 nt1.46□□□□□ -2.18
SPC98P53540 IRA1YBR140C 9279 nt1.45□□□□□ -2.18
SPC98P53540 SWI4YER111C 3282 nt1.45□□□□□ -2.18
SPC98P53540 UTP8YGR128C 2142 nt1.45□□□□□ -2.18
SPC98P53540 ASE1YOR058C 2658 nt1.44□□□□□ -2.18
SPC98P53540 APL3YBL037W 3078 nt1.44□□□□□ -2.18
SPC98P53540 SEC3YER008C 4011 nt1.44□□□□□ -2.18
SPC98P53540 PET127YOR017W 2403 nt1.44□□□□□ -2.18
SPC98P53540 tH(GUG)E1tH(GUG)E1 72 nt1.44□□□□□ -2.18
SPC98P53540 tH(GUG)E2tH(GUG)E2 72 nt1.44□□□□□ -2.18
SPC98P53540 tH(GUG)G1tH(GUG)G1 72 nt1.44□□□□□ -2.18
SPC98P53540 tH(GUG)G2tH(GUG)G2 72 nt1.44□□□□□ -2.18
SPC98P53540 tH(GUG)HtH(GUG)H 72 nt1.44□□□□□ -2.18
SPC98P53540 tH(GUG)KtH(GUG)K 72 nt1.44□□□□□ -2.18
SPC98P53540 tH(GUG)MtH(GUG)M 72 nt1.44□□□□□ -2.18
SPC98P53540 SXM1YDR395W 2835 nt1.44□□□□□ -2.18
SPC98P53540 CDC25YLR310C 4770 nt1.43□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 32.5 ms