Protein–RNA interactions for Protein: P52593

NUP188, Nucleoporin NUP188, yeastyeast

Known RBP Predictions only

Length 1,655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP188P52593 RSM18YER050C 417 nt-2.26□□□□□ -2.77
NUP188P52593 YPL261CYPL261C 309 nt-2.26□□□□□ -2.77
NUP188P52593 snR189snR189 189 nt-2.26□□□□□ -2.77
NUP188P52593 VAM3YOR106W 852 nt-2.28□□□□□ -2.77
NUP188P52593 LIN1YHR156C 1023 nt-2.28□□□□□ -2.77
NUP188P52593 LOC1YFR001W 615 nt-2.29□□□□□ -2.78
NUP188P52593 YJR140W-AYJR140W-A 150 nt-2.31□□□□□ -2.78
NUP188P52593 YNL162W-AYNL162W-A 219 nt-2.31□□□□□ -2.78
NUP188P52593 snR5snR5 204 nt-2.34□□□□□ -2.78
NUP188P52593 YBR072C-AYBR072C-A 162 nt-2.34□□□□□ -2.78
NUP188P52593 snR24snR24 89 nt-2.34□□□□□ -2.78
NUP188P52593 YDR543CYDR543C 300 nt-2.35□□□□□ -2.79
NUP188P52593 YAL068W-AYAL068W-A 255 nt-2.35□□□□□ -2.79
NUP188P52593 YOR011W-AYOR011W-A 207 nt-2.35□□□□□ -2.79
NUP188P52593 YOR366WYOR366W 354 nt-2.36□□□□□ -2.79
NUP188P52593 YPR092WYPR092W 306 nt-2.36□□□□□ -2.79
NUP188P52593 YDR290WYDR290W 330 nt-2.37□□□□□ -2.79
NUP188P52593 CUP1-1YHR053C 186 nt-2.37□□□□□ -2.79
NUP188P52593 CUP1-2YHR055C 186 nt-2.37□□□□□ -2.79
NUP188P52593 tT(UGU)Q1tT(UGU)Q1 76 nt-2.37□□□□□ -2.79
NUP188P52593 YPR010C-AYPR010C-A 219 nt-2.38□□□□□ -2.79
NUP188P52593 PMP2YEL017C-A 132 nt-2.39□□□□□ -2.79
NUP188P52593 SPC24YMR117C 642 nt-2.4□□□□□ -2.79
NUP188P52593 THG1YGR024C 714 nt-2.41□□□□□ -2.79
NUP188P52593 SCEIQ0160 708 nt-2.41□□□□□ -2.8
NUP188P52593 YLR264C-AYLR264C-A 117 nt-2.42□□□□□ -2.8
NUP188P52593 PET20YPL159C 762 nt-2.42□□□□□ -2.8
NUP188P52593 Q0142Q0142 177 nt-2.43□□□□□ -2.8
NUP188P52593 COX7YMR256C 183 nt-2.43□□□□□ -2.8
NUP188P52593 RPL22BYFL034C-A 369 nt-2.44□□□□□ -2.8
NUP188P52593 DFG10YIL049W 762 nt-2.45□□□□□ -2.8
NUP188P52593 YOR192C-CYOR192C-C 237 nt-2.45□□□□□ -2.8
NUP188P52593 BNS1YGR230W 414 nt-2.47□□□□□ -2.8
NUP188P52593 YBL107W-AYBL107W-A 105 nt-2.47□□□□□ -2.81
NUP188P52593 YPL068CYPL068C 882 nt-2.47□□□□□ -2.81
NUP188P52593 IRC16YPR038W 360 nt-2.47□□□□□ -2.81
NUP188P52593 YER135CYER135C 393 nt-2.5□□□□□ -2.81
NUP188P52593 YDR366CYDR366C 399 nt-2.5□□□□□ -2.81
NUP188P52593 YOR170WYOR170W 306 nt-2.5□□□□□ -2.81
NUP188P52593 LSM4YER112W 564 nt-2.51□□□□□ -2.81
NUP188P52593 YGL015CYGL015C 393 nt-2.51□□□□□ -2.81
NUP188P52593 SGF11YPL047W 300 nt-2.51□□□□□ -2.81
NUP188P52593 YKL202WYKL202W 582 nt-2.53□□□□□ -2.81
NUP188P52593 AIM29YKR074W 468 nt-2.53□□□□□ -2.81
NUP188P52593 CWC23YGL128C 852 nt-2.53□□□□□ -2.82
NUP188P52593 YGL052WYGL052W 306 nt-2.54□□□□□ -2.82
NUP188P52593 VPS63YLR261C 327 nt-2.54□□□□□ -2.82
NUP188P52593 snR72snR72 98 nt-2.56□□□□□ -2.82
NUP188P52593 snR74snR74 88 nt-2.56□□□□□ -2.82
NUP188P52593 YOL106WYOL106W 354 nt-2.56□□□□□ -2.82
NUP188P52593 CBS1YDL069C 690 nt-2.57□□□□□ -2.82
NUP188P52593 snR51snR51 107 nt-2.59□□□□□ -2.82
NUP188P52593 snR81snR81 201 nt-2.6□□□□□ -2.82
NUP188P52593 SRB7YDR308C 423 nt-2.6□□□□□ -2.82
NUP188P52593 YER188C-AYER188C-A 300 nt-2.6□□□□□ -2.82
NUP188P52593 HUR1YGL168W 333 nt-2.6□□□□□ -2.82
NUP188P52593 VPS20YMR077C 666 nt-2.6□□□□□ -2.83
NUP188P52593 snR59snR59 78 nt-2.63□□□□□ -2.83
NUP188P52593 POP7YBR167C 423 nt-2.63□□□□□ -2.83
NUP188P52593 SDH6YDR379C-A 240 nt-2.63□□□□□ -2.83
NUP188P52593 YNL058CYNL058C 951 nt-2.64□□□□□ -2.83
NUP188P52593 YPR016W-AYPR016W-A 261 nt-2.64□□□□□ -2.83
NUP188P52593 MND1YGL183C 660 nt-2.66□□□□□ -2.83
NUP188P52593 CDC65tQ(CUG)M 72 nt-2.69□□□□□ -2.84
NUP188P52593 YER053C-AYER053C-A 114 nt-2.69□□□□□ -2.84
NUP188P52593 YPT6YLR262C 648 nt-2.69□□□□□ -2.84
NUP188P52593 HMLALPHA2YCL067C 633 nt-2.7□□□□□ -2.84
NUP188P52593 MATALPHA2YCR039C 633 nt-2.7□□□□□ -2.84
NUP188P52593 HMRA2YCR096C 360 nt-2.7□□□□□ -2.84
NUP188P52593 YGL239CYGL239C 315 nt-2.7□□□□□ -2.84
NUP188P52593 ACF4YJR083C 930 nt-2.73□□□□□ -2.85
NUP188P52593 RDS3YPR094W 324 nt-2.73□□□□□ -2.85
NUP188P52593 ZEO1YOL109W 342 nt-2.76□□□□□ -2.85
NUP188P52593 YFR009W-AYFR009W-A 258 nt-2.77□□□□□ -2.85
NUP188P52593 FYV7YLR068W 456 nt-2.79□□□□□ -2.86
NUP188P52593 YPL229WYPL229W 621 nt-2.79□□□□□ -2.86
NUP188P52593 YBR285WYBR285W 435 nt-2.79□□□□□ -2.86
NUP188P52593 snR77snR77 88 nt-2.8□□□□□ -2.86
NUP188P52593 EAF6YJR082C 342 nt-2.8□□□□□ -2.86
NUP188P52593 YKL063CYKL063C 504 nt-2.8□□□□□ -2.86
NUP188P52593 YMR304C-AYMR304C-A 351 nt-2.8□□□□□ -2.86
NUP188P52593 YGR025WYGR025W 303 nt-2.81□□□□□ -2.86
NUP188P52593 YHR125WYHR125W 306 nt-2.81□□□□□ -2.86
NUP188P52593 JLP2YMR132C 627 nt-2.81□□□□□ -2.86
NUP188P52593 YOR121CYOR121C 306 nt-2.81□□□□□ -2.86
NUP188P52593 ILM1YJR118C 612 nt-2.82□□□□□ -2.86
NUP188P52593 YKL100W-AYKL100W-A 90 nt-2.82□□□□□ -2.86
NUP188P52593 YLR334CYLR334C 381 nt-2.83□□□□□ -2.86
NUP188P52593 YAR029WYAR029W 225 nt-2.85□□□□□ -2.87
NUP188P52593 YOR293C-AYOR293C-A 150 nt-2.89□□□□□ -2.87
NUP188P52593 YGL230CYGL230C 444 nt-2.9□□□□□ -2.87
NUP188P52593 YDR354C-AYDR354C-A 144 nt-2.91□□□□□ -2.87
NUP188P52593 YJR087WYJR087W 351 nt-2.91□□□□□ -2.87
NUP188P52593 YOR364WYOR364W 369 nt-2.92□□□□□ -2.88
NUP188P52593 YCR001WYCR001W 315 nt-2.94□□□□□ -2.88
NUP188P52593 YGR240C-AYGR240C-A 201 nt-2.94□□□□□ -2.88
NUP188P52593 CSE2YNR010W 450 nt-2.94□□□□□ -2.88
NUP188P52593 YKL044WYKL044W 321 nt-2.95□□□□□ -2.88
NUP188P52593 YNL171CYNL171C 369 nt-2.95□□□□□ -2.88
NUP188P52593 YNL205CYNL205C 423 nt-2.95□□□□□ -2.88
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms