Protein–RNA interactions for Protein: P38998

LYS1, Saccharopine dehydrogenase [NAD(+), L-lysine-forming], yeastyeast

RIP-Chip data

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LYS1P38998 YLR120W-AYLR120W-A 102 nt1.06□□□□□ -2.24
LYS1P38998 YOR008C-AYOR008C-A 225 nt1.06□□□□□ -2.24
LYS1P38998 YEL020C-BYEL020C-B 198 nt1.05□□□□□ -2.24
LYS1P38998 AHC1YOR023C 1701 nt1.05□□□□□ -2.24
LYS1P38998 OLI1Q0130 231 nt1.04□□□□□ -2.24
LYS1P38998 YMR172C-AYMR172C-A 384 nt1.03□□□□□ -2.24
LYS1P38998 SGF11YPL047W 300 nt1.03□□□□□ -2.24
LYS1P38998 ROM2YLR371W 4071 nt1.03□□□□□ -2.25
LYS1P38998 NST1YNL091W 3723 nt1.02□□□□□ -2.25
LYS1P38998 GEA2YEL022W 4380 nt1.02□□□□□ -2.25 RIP-Chip
LYS1P38998 MCM10YIL150C 1716 nt1.02□□□□□ -2.25
LYS1P38998 YPL152W-AYPL152W-A 99 nt1.02□□□□□ -2.25
LYS1P38998 YGL052WYGL052W 306 nt1.01□□□□□ -2.25
LYS1P38998 YJL197C-AYJL197C-A 282 nt1.01□□□□□ -2.25
LYS1P38998 YML099W-AYML099W-A 330 nt1.01□□□□□ -2.25
LYS1P38998 SMC1YFL008W 3678 nt1□□□□□ -2.25
LYS1P38998 SPT7YBR081C 3999 nt0.99□□□□□ -2.25
LYS1P38998 YNL211CYNL211C 261 nt0.99□□□□□ -2.25
LYS1P38998 KAP120YPL125W 3099 nt0.99□□□□□ -2.25
LYS1P38998 CMC4YMR194C-B 222 nt0.98□□□□□ -2.25
LYS1P38998 YPR092WYPR092W 306 nt0.98□□□□□ -2.25
LYS1P38998 NOP9YJL010C 2001 nt0.98□□□□□ -2.25
LYS1P38998 YDR354C-AYDR354C-A 144 nt0.97□□□□□ -2.25
LYS1P38998 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
LYS1P38998 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
LYS1P38998 APL1YJR005W 2103 nt0.97□□□□□ -2.25
LYS1P38998 YPL044CYPL044C 549 nt0.96□□□□□ -2.26
LYS1P38998 YDL196WYDL196W 330 nt0.95□□□□□ -2.26
LYS1P38998 ISD11YER048W-A 285 nt0.95□□□□□ -2.26
LYS1P38998 PAM16YJL104W 450 nt0.95□□□□□ -2.26 RIP-Chip
LYS1P38998 RPS30BYOR182C 192 nt0.95□□□□□ -2.26
LYS1P38998 snR49snR49 165 nt0.95□□□□□ -2.26
LYS1P38998 snR74snR74 88 nt0.94□□□□□ -2.26
LYS1P38998 PAA1YDR071C 576 nt0.94□□□□□ -2.26
LYS1P38998 YJL026C-AYJL026C-A 222 nt0.94□□□□□ -2.26
LYS1P38998 YLL019W-AYLL019W-A 93 nt0.94□□□□□ -2.26
LYS1P38998 ASE1YOR058C 2658 nt0.93□□□□□ -2.26 RIP-Chip
LYS1P38998 YAL067W-AYAL067W-A 228 nt0.93□□□□□ -2.26
LYS1P38998 YOR282WYOR282W 321 nt0.93□□□□□ -2.26
LYS1P38998 YCR022CYCR022C 345 nt0.92□□□□□ -2.26
LYS1P38998 YFR012W-AYFR012W-A 87 nt0.92□□□□□ -2.26
LYS1P38998 YHR063W-AYHR063W-A 336 nt0.92□□□□□ -2.26
LYS1P38998 YOR072W-BYOR072W-B 162 nt0.92□□□□□ -2.26
LYS1P38998 YMR307C-AYMR307C-A 195 nt0.91□□□□□ -2.26
LYS1P38998 VAM6YDL077C 3150 nt0.91□□□□□ -2.26 RIP-Chip
LYS1P38998 BFR2YDR299W 1605 nt0.89□□□□□ -2.27
LYS1P38998 YDL185C-AYDL185C-A 228 nt0.89□□□□□ -2.27
LYS1P38998 RPL26BYGR034W 384 nt0.89□□□□□ -2.27
LYS1P38998 snR55snR55 98 nt0.88□□□□□ -2.27
LYS1P38998 PMP1YCR024C-A 123 nt0.88□□□□□ -2.27
LYS1P38998 tF(GAA)QtF(GAA)Q 75 nt0.88□□□□□ -2.27
LYS1P38998 YDL073WYDL073W 2955 nt0.88□□□□□ -2.27 RIP-Chip
LYS1P38998 BUD3YCL014W 4911 nt0.86□□□□□ -2.27
LYS1P38998 EMT1tM(CAU)D 73 nt0.86□□□□□ -2.27
LYS1P38998 EMT5tM(CAU)J1 73 nt0.86□□□□□ -2.27
LYS1P38998 EMT3tM(CAU)J2 73 nt0.86□□□□□ -2.27
LYS1P38998 EMT4tM(CAU)M 73 nt0.86□□□□□ -2.27
LYS1P38998 YGL188C-AYGL188C-A 141 nt0.86□□□□□ -2.27
LYS1P38998 EMT2tM(CAU)O2 73 nt0.86□□□□□ -2.27
LYS1P38998 YOL155W-AYOL155W-A 135 nt0.86□□□□□ -2.27
LYS1P38998 PRP16YKR086W 3216 nt0.85□□□□□ -2.27
LYS1P38998 YCR018C-AYCR018C-A 255 nt0.85□□□□□ -2.27
LYS1P38998 YGL041CYGL041C 204 nt0.85□□□□□ -2.27
LYS1P38998 YIR030W-AYIR030W-A 384 nt0.85□□□□□ -2.27
LYS1P38998 RKR1YMR247C 4689 nt0.85□□□□□ -2.27
LYS1P38998 BEM2YER155C 6504 nt0.84□□□□□ -2.27
LYS1P38998 ABF2YMR072W 552 nt0.84□□□□□ -2.27
LYS1P38998 YBR182C-AYBR182C-A 195 nt0.84□□□□□ -2.27
LYS1P38998 PAU24YBR301W 363 nt0.84□□□□□ -2.27 RIP-Chip
LYS1P38998 SCC2YDR180W 4482 nt0.83□□□□□ -2.28
LYS1P38998 NPR2YEL062W 1848 nt0.83□□□□□ -2.28
LYS1P38998 snR8snR8 190 nt0.83□□□□□ -2.28 RIP-Chip
LYS1P38998 YKU70YMR284W 1809 nt0.82□□□□□ -2.28
LYS1P38998 snR190snR190 190 nt0.82□□□□□ -2.28
LYS1P38998 COY1YKL179C 2040 nt0.81□□□□□ -2.28
LYS1P38998 PAU12YGR294W 363 nt0.81□□□□□ -2.28 RIP-Chip
LYS1P38998 YIL142C-AYIL142C-A 333 nt0.81□□□□□ -2.28
LYS1P38998 snR80snR80 171 nt0.8□□□□□ -2.28
LYS1P38998 YLR282CYLR282C 342 nt0.8□□□□□ -2.28
LYS1P38998 SEC8YPR055W 3198 nt0.8□□□□□ -2.28
LYS1P38998 YPR117WYPR117W 7470 nt0.79□□□□□ -2.28
LYS1P38998 tF(GAA)BtF(GAA)B 73 nt0.79□□□□□ -2.28
LYS1P38998 tF(GAA)FtF(GAA)F 73 nt0.79□□□□□ -2.28
LYS1P38998 tF(GAA)GtF(GAA)G 73 nt0.79□□□□□ -2.28
LYS1P38998 tF(GAA)H1tF(GAA)H1 73 nt0.79□□□□□ -2.28
LYS1P38998 tF(GAA)H2tF(GAA)H2 73 nt0.79□□□□□ -2.28
LYS1P38998 tF(GAA)MtF(GAA)M 73 nt0.79□□□□□ -2.28
LYS1P38998 tF(GAA)P1tF(GAA)P1 73 nt0.79□□□□□ -2.28
LYS1P38998 tF(GAA)P2tF(GAA)P2 73 nt0.79□□□□□ -2.28
LYS1P38998 YPR160W-AYPR160W-A 81 nt0.79□□□□□ -2.28
LYS1P38998 YGL123C-AYGL123C-A 231 nt0.78□□□□□ -2.28
LYS1P38998 YOR161W-AYOR161W-A 81 nt0.78□□□□□ -2.28
LYS1P38998 UBP3YER151C 2739 nt0.77□□□□□ -2.29
LYS1P38998 YIL134C-AYIL134C-A 204 nt0.77□□□□□ -2.29
LYS1P38998 BLI1YKL061W 342 nt0.77□□□□□ -2.29 RIP-Chip
LYS1P38998 COX12YLR038C 252 nt0.77□□□□□ -2.29
LYS1P38998 YLR399W-AYLR399W-A 105 nt0.77□□□□□ -2.29
LYS1P38998 YOR345CYOR345C 351 nt0.77□□□□□ -2.29
LYS1P38998 DOP1YDR141C 5097 nt0.77□□□□□ -2.29
LYS1P38998 CHS6YJL099W 2241 nt0.76□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms