Protein–RNA interactions for Protein: P38712

RRP3, ATP-dependent rRNA helicase RRP3, yeastyeast

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP3P38712 ECM12YHR021W-A 456 nt1.34□□□□□ -2.19
RRP3P38712 YJL026C-AYJL026C-A 222 nt1.34□□□□□ -2.19
RRP3P38712 NUP188YML103C 4968 nt1.34□□□□□ -2.2
RRP3P38712 YDL206WYDL206W 2289 nt1.33□□□□□ -2.2
RRP3P38712 YDL185C-AYDL185C-A 228 nt1.33□□□□□ -2.2
RRP3P38712 YIL134C-AYIL134C-A 204 nt1.33□□□□□ -2.2
RRP3P38712 YNL337WYNL337W 255 nt1.33□□□□□ -2.2
RRP3P38712 YOR345CYOR345C 351 nt1.33□□□□□ -2.2
RRP3P38712 ADR1YDR216W 3972 nt1.33□□□□□ -2.2
RRP3P38712 CDC25YLR310C 4770 nt1.33□□□□□ -2.2
RRP3P38712 APL3YBL037W 3078 nt1.33□□□□□ -2.2
RRP3P38712 PAN2YGL094C 3348 nt1.33□□□□□ -2.2
RRP3P38712 YDL196WYDL196W 330 nt1.32□□□□□ -2.2
RRP3P38712 tQ(UUG)E2tQ(UUG)E2 72 nt1.32□□□□□ -2.2
RRP3P38712 YJL150WYJL150W 303 nt1.32□□□□□ -2.2
RRP3P38712 YLR140WYLR140W 327 nt1.32□□□□□ -2.2
RRP3P38712 PBY1YBR094W 2262 nt1.32□□□□□ -2.2
RRP3P38712 NUP157YER105C 4176 nt1.31□□□□□ -2.2
RRP3P38712 SET3YKR029C 2256 nt1.31□□□□□ -2.2
RRP3P38712 YGL007C-AYGL007C-A 87 nt1.31□□□□□ -2.2
RRP3P38712 SEC21YNL287W 2808 nt1.31□□□□□ -2.2
RRP3P38712 HAL9YOL089C 3093 nt1.31□□□□□ -2.2
RRP3P38712 PIK1YNL267W 3201 nt1.3□□□□□ -2.2
RRP3P38712 OLI1Q0130 231 nt1.3□□□□□ -2.2
RRP3P38712 NCA2YPR155C 1851 nt1.3□□□□□ -2.2
RRP3P38712 YAR009CYAR009C 3591 nt1.3□□□□□ -2.2
RRP3P38712 ASE1YOR058C 2658 nt1.3□□□□□ -2.2
RRP3P38712 snR46snR46 197 nt1.29□□□□□ -2.2
RRP3P38712 YNL284C-BYNL284C-B 5268 nt1.29□□□□□ -2.2
RRP3P38712 YOR072W-BYOR072W-B 162 nt1.28□□□□□ -2.2
RRP3P38712 PIP2YOR363C 2991 nt1.28□□□□□ -2.2
RRP3P38712 SWI4YER111C 3282 nt1.28□□□□□ -2.21
RRP3P38712 BST1YFL025C 3090 nt1.27□□□□□ -2.21
RRP3P38712 YBR221W-AYBR221W-A 105 nt1.27□□□□□ -2.21
RRP3P38712 STO1YMR125W 2586 nt1.26□□□□□ -2.21
RRP3P38712 ISD11YER048W-A 285 nt1.26□□□□□ -2.21
RRP3P38712 tV(UAC)BtV(UAC)B 74 nt1.26□□□□□ -2.21
RRP3P38712 tV(UAC)DtV(UAC)D 74 nt1.26□□□□□ -2.21
RRP3P38712 TTI1YKL033W 3117 nt1.26□□□□□ -2.21
RRP3P38712 FIG4YNL325C 2640 nt1.25□□□□□ -2.21
RRP3P38712 YNL211CYNL211C 261 nt1.25□□□□□ -2.21
RRP3P38712 RPL33BYOR234C 324 nt1.25□□□□□ -2.21
RRP3P38712 MMS4YBR098W 2076 nt1.25□□□□□ -2.21
RRP3P38712 SEC3YER008C 4011 nt1.24□□□□□ -2.21
RRP3P38712 EST2YLR318W 2655 nt1.24□□□□□ -2.21
RRP3P38712 COY1YKL179C 2040 nt1.24□□□□□ -2.21
RRP3P38712 PAA1YDR071C 576 nt1.24□□□□□ -2.21
RRP3P38712 COX12YLR038C 252 nt1.24□□□□□ -2.21
RRP3P38712 STB6YKL072W 2301 nt1.24□□□□□ -2.21
RRP3P38712 AIM44YPL158C 2277 nt1.23□□□□□ -2.21
RRP3P38712 IML1YJR138W 4755 nt1.23□□□□□ -2.21
RRP3P38712 YLR466C-BYLR466C-B 117 nt1.23□□□□□ -2.21
RRP3P38712 YOR161W-BYOR161W-B 261 nt1.23□□□□□ -2.21
RRP3P38712 EAF1YDR359C 2949 nt1.22□□□□□ -2.21
RRP3P38712 PMP1YCR024C-A 123 nt1.22□□□□□ -2.21
RRP3P38712 YIL020C-AYIL020C-A 339 nt1.22□□□□□ -2.21
RRP3P38712 YJL182CYJL182C 318 nt1.22□□□□□ -2.21
RRP3P38712 YAL067W-AYAL067W-A 228 nt1.22□□□□□ -2.21
RRP3P38712 RPS30BYOR182C 192 nt1.22□□□□□ -2.21
RRP3P38712 PRP39YML046W 1890 nt1.22□□□□□ -2.21
RRP3P38712 KAP120YPL125W 3099 nt1.21□□□□□ -2.21
RRP3P38712 LAA1YJL207C 6045 nt1.21□□□□□ -2.22
RRP3P38712 Q0032Q0032 291 nt1.21□□□□□ -2.22
RRP3P38712 YFR012W-AYFR012W-A 87 nt1.21□□□□□ -2.22
RRP3P38712 ULI1YFR026C 510 nt1.2□□□□□ -2.22
RRP3P38712 RSM22YKL155C 1887 nt1.19□□□□□ -2.22
RRP3P38712 MSN5YDR335W 3675 nt1.19□□□□□ -2.22
RRP3P38712 RAD9YDR217C 3930 nt1.19□□□□□ -2.22
RRP3P38712 YLL054CYLL054C 2532 nt1.18□□□□□ -2.22
RRP3P38712 YEL014CYEL014C 306 nt1.17□□□□□ -2.22
RRP3P38712 CMC4YMR194C-B 222 nt1.17□□□□□ -2.22
RRP3P38712 SIP4YJL089W 2490 nt1.16□□□□□ -2.22
RRP3P38712 YLL020CYLL020C 306 nt1.16□□□□□ -2.22
RRP3P38712 YLR294CYLR294C 330 nt1.16□□□□□ -2.22
RRP3P38712 YPL044CYPL044C 549 nt1.16□□□□□ -2.22
RRP3P38712 APL1YJR005W 2103 nt1.16□□□□□ -2.22
RRP3P38712 AZF1YOR113W 2745 nt1.16□□□□□ -2.22
RRP3P38712 NOP9YJL010C 2001 nt1.15□□□□□ -2.22
RRP3P38712 PRP16YKR086W 3216 nt1.15□□□□□ -2.23
RRP3P38712 YCR038W-AYCR038W-A 126 nt1.15□□□□□ -2.23
RRP3P38712 YGR151CYGR151C 336 nt1.15□□□□□ -2.23
RRP3P38712 TRS65YGR166W 1683 nt1.15□□□□□ -2.23
RRP3P38712 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
RRP3P38712 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
RRP3P38712 YOR161W-AYOR161W-A 81 nt1.14□□□□□ -2.23
RRP3P38712 snR52snR52 92 nt1.14□□□□□ -2.23
RRP3P38712 NUP145YGL092W 3954 nt1.14□□□□□ -2.23
RRP3P38712 WAR1YML076C 2835 nt1.14□□□□□ -2.23
RRP3P38712 BUD3YCL014W 4911 nt1.13□□□□□ -2.23
RRP3P38712 YDL073WYDL073W 2955 nt1.13□□□□□ -2.23
RRP3P38712 YER053C-AYER053C-A 114 nt1.12□□□□□ -2.23
RRP3P38712 YBR200W-AYBR200W-A 165 nt1.12□□□□□ -2.23
RRP3P38712 GEA2YEL022W 4380 nt1.11□□□□□ -2.23
RRP3P38712 YIL002W-AYIL002W-A 210 nt1.11□□□□□ -2.23
RRP3P38712 YLR342W-AYLR342W-A 174 nt1.1□□□□□ -2.23
RRP3P38712 YNL338WYNL338W 159 nt1.1□□□□□ -2.23
RRP3P38712 YGL123C-AYGL123C-A 231 nt1.09□□□□□ -2.23
RRP3P38712 MYO1YHR023W 5787 nt1.08□□□□□ -2.24
RRP3P38712 VAM6YDL077C 3150 nt1.07□□□□□ -2.24
RRP3P38712 YLR041WYLR041W 321 nt1.07□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 54.1 ms