Protein–RNA interactions for Protein: P38249

RPG1, Eukaryotic translation initiation factor 3 subunit A, yeastyeast

Known RBP Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPG1P38249 MDN1YLR106C 14733 nt3.83□□□□□ -1.8
RPG1P38249 YOR055WYOR055W 435 nt3.81□□□□□ -1.8
RPG1P38249 RPA190YOR341W 4995 nt3.81□□□□□ -1.8
RPG1P38249 EST2YLR318W 2655 nt3.81□□□□□ -1.8
RPG1P38249 snR70snR70 164 nt3.8□□□□□ -1.8
RPG1P38249 snR190snR190 190 nt3.8□□□□□ -1.8
RPG1P38249 CTR9YOL145C 3234 nt3.8□□□□□ -1.8
RPG1P38249 SSM4YIL030C 3960 nt3.79□□□□□ -1.8
RPG1P38249 PKH3YDR466W 2697 nt3.77□□□□□ -1.81
RPG1P38249 snR14snR14 160 nt3.76□□□□□ -1.81
RPG1P38249 RDS3YPR094W 324 nt3.76□□□□□ -1.81
RPG1P38249 RGC1YPR115W 3252 nt3.76□□□□□ -1.81
RPG1P38249 YPR160W-AYPR160W-A 81 nt3.75□□□□□ -1.81
RPG1P38249 AUS1YOR011W 4185 nt3.75□□□□□ -1.81
RPG1P38249 TOF1YNL273W 3717 nt3.74□□□□□ -1.81
RPG1P38249 snR69snR69 101 nt3.74□□□□□ -1.81
RPG1P38249 MET18YIL128W 3099 nt3.74□□□□□ -1.81
RPG1P38249 NUP100YKL068W 2880 nt3.74□□□□□ -1.81
RPG1P38249 YDR209CYDR209C 414 nt3.73□□□□□ -1.81
RPG1P38249 NMD2YHR077C 3270 nt3.73□□□□□ -1.81
RPG1P38249 tQ(UUG)BtQ(UUG)B 72 nt3.72□□□□□ -1.81
RPG1P38249 SYH1YPL105C 2550 nt3.72□□□□□ -1.81
RPG1P38249 TCB2YNL087W 3537 nt3.72□□□□□ -1.81
RPG1P38249 GYP5YPL249C 2685 nt3.71□□□□□ -1.82
RPG1P38249 URA2YJL130C 6645 nt3.71□□□□□ -1.82
RPG1P38249 SSN2YDR443C 4263 nt3.71□□□□□ -1.82
RPG1P38249 SMC3YJL074C 3693 nt3.7□□□□□ -1.82
RPG1P38249 DNA2YHR164C 4569 nt3.7□□□□□ -1.82
RPG1P38249 NST1YNL091W 3723 nt3.67□□□□□ -1.82
RPG1P38249 PMR1YGL167C 2853 nt3.67□□□□□ -1.82
RPG1P38249 RRP5YMR229C 5190 nt3.66□□□□□ -1.82
RPG1P38249 NUT1YGL151W 3399 nt3.65□□□□□ -1.83
RPG1P38249 BMS1YPL217C 3552 nt3.65□□□□□ -1.83
RPG1P38249 SPC110YDR356W 2835 nt3.64□□□□□ -1.83
RPG1P38249 YAR009CYAR009C 3591 nt3.64□□□□□ -1.83
RPG1P38249 snR40snR40 97 nt3.64□□□□□ -1.83
RPG1P38249 ESL1YIL151C 3357 nt3.64□□□□□ -1.83
RPG1P38249 YEF3YLR249W 3135 nt3.64□□□□□ -1.83
RPG1P38249 PDR1YGL013C 3207 nt3.62□□□□□ -1.83
RPG1P38249 YEL025CYEL025C 3567 nt3.62□□□□□ -1.83
RPG1P38249 IRE1YHR079C 3348 nt3.62□□□□□ -1.83
RPG1P38249 POL2YNL262W 6669 nt3.61□□□□□ -1.83
RPG1P38249 CIN8YEL061C 3003 nt3.61□□□□□ -1.83
RPG1P38249 RTT101YJL047C 2529 nt3.6□□□□□ -1.83
RPG1P38249 YIL169CYIL169C 2988 nt3.59□□□□□ -1.83
RPG1P38249 TFC3YAL001C 3483 nt3.58□□□□□ -1.84
RPG1P38249 SSD1YDR293C 3753 nt3.58□□□□□ -1.84
RPG1P38249 BUL2YML111W 2763 nt3.57□□□□□ -1.84
RPG1P38249 SXM1YDR395W 2835 nt3.56□□□□□ -1.84
RPG1P38249 TDA9YML081W 3756 nt3.55□□□□□ -1.84
RPG1P38249 tW(CCA)G1tW(CCA)G1 72 nt3.55□□□□□ -1.84
RPG1P38249 tW(CCA)G2tW(CCA)G2 72 nt3.55□□□□□ -1.84
RPG1P38249 tW(CCA)JtW(CCA)J 72 nt3.55□□□□□ -1.84
RPG1P38249 tW(CCA)KtW(CCA)K 72 nt3.55□□□□□ -1.84
RPG1P38249 tW(CCA)MtW(CCA)M 72 nt3.55□□□□□ -1.84
RPG1P38249 tW(CCA)PtW(CCA)P 72 nt3.55□□□□□ -1.84
RPG1P38249 GCN1YGL195W 8019 nt3.55□□□□□ -1.84
RPG1P38249 CSE1YGL238W 2883 nt3.55□□□□□ -1.84
RPG1P38249 AMS1YGL156W 3252 nt3.55□□□□□ -1.84
RPG1P38249 ULP2YIL031W 3105 nt3.55□□□□□ -1.84
RPG1P38249 YPL060C-AYPL060C-A 3315 nt3.54□□□□□ -1.84
RPG1P38249 RPN1YHR027C 2982 nt3.53□□□□□ -1.84
RPG1P38249 CAT8YMR280C 4302 nt3.52□□□□□ -1.85
RPG1P38249 MSH6YDR097C 3729 nt3.52□□□□□ -1.85
RPG1P38249 YIL082W-AYIL082W-A 4497 nt3.52□□□□□ -1.85
RPG1P38249 REV3YPL167C 4515 nt3.51□□□□□ -1.85
RPG1P38249 YDL114W-AYDL114W-A 114 nt3.51□□□□□ -1.85
RPG1P38249 STO1YMR125W 2586 nt3.5□□□□□ -1.85
RPG1P38249 YJL052C-AYJL052C-A 120 nt3.49□□□□□ -1.85
RPG1P38249 YPL216WYPL216W 3309 nt3.49□□□□□ -1.85
RPG1P38249 MSB2YGR014W 3921 nt3.48□□□□□ -1.85
RPG1P38249 ILS1YBL076C 3219 nt3.48□□□□□ -1.85
RPG1P38249 YSP2YDR326C 4317 nt3.45□□□□□ -1.86
RPG1P38249 PET309YLR067C 2898 nt3.45□□□□□ -1.86
RPG1P38249 CSR2YPR030W 3366 nt3.44□□□□□ -1.86
RPG1P38249 STT4YLR305C 5703 nt3.44□□□□□ -1.86
RPG1P38249 YSP1YHR155W 3687 nt3.42□□□□□ -1.86
RPG1P38249 SPO14YKR031C 5052 nt3.41□□□□□ -1.86
RPG1P38249 YLR422WYLR422W 5799 nt3.4□□□□□ -1.87
RPG1P38249 YJL077W-AYJL077W-A 87 nt3.39□□□□□ -1.87
RPG1P38249 DGR1YNL130C-A 147 nt3.39□□□□□ -1.87
RPG1P38249 FLO1YAR050W 4614 nt3.39□□□□□ -1.87
RPG1P38249 PRP16YKR086W 3216 nt3.38□□□□□ -1.87
RPG1P38249 CDC25YLR310C 4770 nt3.38□□□□□ -1.87
RPG1P38249 KOG1YHR186C 4674 nt3.36□□□□□ -1.87
RPG1P38249 UTP21YLR409C 2820 nt3.36□□□□□ -1.87
RPG1P38249 tV(UAC)QtV(UAC)Q 76 nt3.36□□□□□ -1.87
RPG1P38249 SGS1YMR190C 4344 nt3.35□□□□□ -1.87
RPG1P38249 MSB1YOR188W 3414 nt3.35□□□□□ -1.87
RPG1P38249 SEC8YPR055W 3198 nt3.35□□□□□ -1.87
RPG1P38249 SEC3YER008C 4011 nt3.35□□□□□ -1.87
RPG1P38249 KIP1YBL063W 3336 nt3.35□□□□□ -1.87
RPG1P38249 SNQ2YDR011W 4506 nt3.34□□□□□ -1.87
RPG1P38249 RAD50YNL250W 3939 nt3.34□□□□□ -1.88
RPG1P38249 YCS4YLR272C 3531 nt3.33□□□□□ -1.88
RPG1P38249 FKS3YMR306W 5358 nt3.33□□□□□ -1.88
RPG1P38249 HIR3YJR140C 4947 nt3.33□□□□□ -1.88
RPG1P38249 SIR4YDR227W 4077 nt3.33□□□□□ -1.88
RPG1P38249 PAU12YGR294W 363 nt3.32□□□□□ -1.88
RPG1P38249 HUG1YML058W-A 207 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 36.5 ms