Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 GCN2YDR283C 4980 nt2.18□□□□□ -2.06
VPS35P34110 YLR419WYLR419W 4308 nt2.17□□□□□ -2.06
VPS35P34110 SAC3YDR159W 3906 nt2.16□□□□□ -2.06
VPS35P34110 ALY2YJL084C 3141 nt2.15□□□□□ -2.06
VPS35P34110 YIL002W-AYIL002W-A 210 nt2.15□□□□□ -2.07
VPS35P34110 YAL067W-AYAL067W-A 228 nt2.14□□□□□ -2.07
VPS35P34110 YNL211CYNL211C 261 nt2.14□□□□□ -2.07
VPS35P34110 YOR314W-AYOR314W-A 111 nt2.14□□□□□ -2.07
VPS35P34110 TBS1YBR150C 3285 nt2.14□□□□□ -2.07
VPS35P34110 LHS1YKL073W 2646 nt2.14□□□□□ -2.07
VPS35P34110 YJL022WYJL022W 309 nt2.12□□□□□ -2.07
VPS35P34110 POL5YEL055C 3069 nt2.12□□□□□ -2.07
VPS35P34110 UFD2YDL190C 2886 nt2.12□□□□□ -2.07
VPS35P34110 KIP1YBL063W 3336 nt2.11□□□□□ -2.07
VPS35P34110 MYO2YOR326W 4725 nt2.11□□□□□ -2.07
VPS35P34110 NEO1YIL048W 3456 nt2.11□□□□□ -2.07
VPS35P34110 PAN2YGL094C 3348 nt2.11□□□□□ -2.07
VPS35P34110 PRP5YBR237W 2550 nt2.1□□□□□ -2.07
VPS35P34110 MMS4YBR098W 2076 nt2.1□□□□□ -2.07
VPS35P34110 SKI3YPR189W 4299 nt2.1□□□□□ -2.07
VPS35P34110 SLX4YLR135W 2247 nt2.09□□□□□ -2.07
VPS35P34110 YCL001W-BYCL001W-B 255 nt2.09□□□□□ -2.07
VPS35P34110 SMC4YLR086W 4257 nt2.09□□□□□ -2.08
VPS35P34110 YFR012W-AYFR012W-A 87 nt2.08□□□□□ -2.08
VPS35P34110 KCS1YDR017C 3153 nt2.08□□□□□ -2.08
VPS35P34110 YOR093CYOR093C 4947 nt2.07□□□□□ -2.08
VPS35P34110 YER053C-AYER053C-A 114 nt2.07□□□□□ -2.08
VPS35P34110 COA6YMR244C-A 315 nt2.07□□□□□ -2.08
VPS35P34110 CDC31YOR257W 486 nt2.07□□□□□ -2.08
VPS35P34110 YCS4YLR272C 3531 nt2.06□□□□□ -2.08
VPS35P34110 snR14snR14 160 nt2.06□□□□□ -2.08
VPS35P34110 YOR019WYOR019W 2193 nt2.06□□□□□ -2.08
VPS35P34110 YAR009CYAR009C 3591 nt2.05□□□□□ -2.08
VPS35P34110 YLL054CYLL054C 2532 nt2.05□□□□□ -2.08
VPS35P34110 tL(UAA)QtL(UAA)Q 85 nt2.05□□□□□ -2.08
VPS35P34110 YGL123C-AYGL123C-A 231 nt2.05□□□□□ -2.08
VPS35P34110 RSM22YKL155C 1887 nt2.05□□□□□ -2.08
VPS35P34110 FIG2YCR089W 4830 nt2.04□□□□□ -2.08
VPS35P34110 DNF3YMR162C 4971 nt2.04□□□□□ -2.08
VPS35P34110 MON2YNL297C 4911 nt2.03□□□□□ -2.08
VPS35P34110 PEP1YBL017C 4740 nt2.03□□□□□ -2.08
VPS35P34110 TMA7YLR262C-A 195 nt2.02□□□□□ -2.09
VPS35P34110 YOR329W-AYOR329W-A 210 nt2.02□□□□□ -2.09
VPS35P34110 YMR272W-BYMR272W-B 108 nt2□□□□□ -2.09
VPS35P34110 SMC1YFL008W 3678 nt1.99□□□□□ -2.09
VPS35P34110 YGL182CYGL182C 324 nt1.99□□□□□ -2.09
VPS35P34110 YOR161W-AYOR161W-A 81 nt1.99□□□□□ -2.09
VPS35P34110 KAP122YGL016W 3246 nt1.99□□□□□ -2.09
VPS35P34110 UTP8YGR128C 2142 nt1.99□□□□□ -2.09
VPS35P34110 BFR2YDR299W 1605 nt1.99□□□□□ -2.09
VPS35P34110 YKL100W-AYKL100W-A 90 nt1.98□□□□□ -2.09
VPS35P34110 COX5BYIL111W 456 nt1.97□□□□□ -2.09
VPS35P34110 YLL020CYLL020C 306 nt1.97□□□□□ -2.09
VPS35P34110 CHS6YJL099W 2241 nt1.97□□□□□ -2.09
VPS35P34110 YMR247W-AYMR247W-A 144 nt1.95□□□□□ -2.1
VPS35P34110 STO1YMR125W 2586 nt1.95□□□□□ -2.1
VPS35P34110 YLR422WYLR422W 5799 nt1.95□□□□□ -2.1
VPS35P34110 SET3YKR029C 2256 nt1.94□□□□□ -2.1
VPS35P34110 IRC20YLR247C 4671 nt1.93□□□□□ -2.1
VPS35P34110 YLR282CYLR282C 342 nt1.93□□□□□ -2.1
VPS35P34110 CMC4YMR194C-B 222 nt1.93□□□□□ -2.1
VPS35P34110 EAF1YDR359C 2949 nt1.91□□□□□ -2.1
VPS35P34110 YBL039C-AYBL039C-A 84 nt1.91□□□□□ -2.1
VPS35P34110 NOP9YJL010C 2001 nt1.91□□□□□ -2.1
VPS35P34110 NUP157YER105C 4176 nt1.9□□□□□ -2.11
VPS35P34110 PKH3YDR466W 2697 nt1.89□□□□□ -2.11
VPS35P34110 STB6YKL072W 2301 nt1.89□□□□□ -2.11
VPS35P34110 RTP1YMR185W 2946 nt1.89□□□□□ -2.11
VPS35P34110 YML002WYML002W 2214 nt1.89□□□□□ -2.11
VPS35P34110 PMD1YER132C 5262 nt1.89□□□□□ -2.11
VPS35P34110 OST4YDL232W 111 nt1.89□□□□□ -2.11
VPS35P34110 tT(UGU)HtT(UGU)H 72 nt1.89□□□□□ -2.11
VPS35P34110 YBR099CYBR099C 384 nt1.89□□□□□ -2.11
VPS35P34110 WAR1YML076C 2835 nt1.89□□□□□ -2.11
VPS35P34110 NUP192YJL039C 5052 nt1.88□□□□□ -2.11
VPS35P34110 CFT1YDR301W 4074 nt1.88□□□□□ -2.11
VPS35P34110 YCR095W-AYCR095W-A 159 nt1.88□□□□□ -2.11
VPS35P34110 SWI4YER111C 3282 nt1.88□□□□□ -2.11
VPS35P34110 YIL071W-AYIL071W-A 477 nt1.87□□□□□ -2.11
VPS35P34110 MEC1YBR136W 7107 nt1.86□□□□□ -2.11
VPS35P34110 TRM732YMR259C 4263 nt1.86□□□□□ -2.11
VPS35P34110 TAH1YCR060W 336 nt1.86□□□□□ -2.11
VPS35P34110 YDR524C-AYDR524C-A 120 nt1.86□□□□□ -2.11
VPS35P34110 APL3YBL037W 3078 nt1.85□□□□□ -2.11
VPS35P34110 YBR178WYBR178W 375 nt1.85□□□□□ -2.11
VPS35P34110 BST1YFL025C 3090 nt1.85□□□□□ -2.11
VPS35P34110 VPS15YBR097W 4365 nt1.84□□□□□ -2.12
VPS35P34110 GEA2YEL022W 4380 nt1.83□□□□□ -2.12
VPS35P34110 RPL26BYGR034W 384 nt1.83□□□□□ -2.12
VPS35P34110 YNL067W-BYNL067W-B 141 nt1.83□□□□□ -2.12
VPS35P34110 QCR9YGR183C 201 nt1.82□□□□□ -2.12
VPS35P34110 YLR041WYLR041W 321 nt1.82□□□□□ -2.12
VPS35P34110 YBL109WYBL109W 336 nt1.82□□□□□ -2.12
VPS35P34110 SEC21YNL287W 2808 nt1.82□□□□□ -2.12
VPS35P34110 SOM1YEL059C-A 225 nt1.81□□□□□ -2.12
VPS35P34110 snR190snR190 190 nt1.81□□□□□ -2.12
VPS35P34110 YBR200W-AYBR200W-A 165 nt1.81□□□□□ -2.12
VPS35P34110 FYV10YIL097W 1551 nt1.81□□□□□ -2.12
VPS35P34110 PMP2YEL017C-A 132 nt1.8□□□□□ -2.12
VPS35P34110 ANS1YHR126C 480 nt1.8□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 27.8 ms