Protein–RNA interactions for Protein: P32343

SSH4, Protein SSH4, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH4P32343 MCM10YIL150C 1716 nt1.09□□□□□ -2.23
SSH4P32343 PAA1YDR071C 576 nt1.09□□□□□ -2.23
SSH4P32343 RPS27BYHR021C 249 nt1.09□□□□□ -2.23
SSH4P32343 ECM12YHR021W-A 456 nt1.09□□□□□ -2.23
SSH4P32343 CMC4YMR194C-B 222 nt1.09□□□□□ -2.23
SSH4P32343 YPL044CYPL044C 549 nt1.09□□□□□ -2.23
SSH4P32343 NHP2YDL208W 471 nt1.08□□□□□ -2.24
SSH4P32343 YDR524W-CYDR524W-C 90 nt1.08□□□□□ -2.24
SSH4P32343 YMR193C-AYMR193C-A 387 nt1.08□□□□□ -2.24
SSH4P32343 VIK1YPL253C 1944 nt1.07□□□□□ -2.24
SSH4P32343 YDR413CYDR413C 576 nt1.07□□□□□ -2.24
SSH4P32343 YER097WYER097W 330 nt1.07□□□□□ -2.24
SSH4P32343 ALG13YGL047W 609 nt1.07□□□□□ -2.24
SSH4P32343 PMP1YCR024C-A 123 nt1.06□□□□□ -2.24
SSH4P32343 snR60snR60 104 nt1.06□□□□□ -2.24
SSH4P32343 YOR218CYOR218C 420 nt1.06□□□□□ -2.24
SSH4P32343 STE5YDR103W 2754 nt1.04□□□□□ -2.24
SSH4P32343 YNL211CYNL211C 261 nt1.04□□□□□ -2.24
SSH4P32343 CSE2YNR010W 450 nt1.04□□□□□ -2.24
SSH4P32343 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
SSH4P32343 IES4YOR189W 351 nt1.03□□□□□ -2.24
SSH4P32343 SGF11YPL047W 300 nt1.03□□□□□ -2.24
SSH4P32343 BFR2YDR299W 1605 nt1.03□□□□□ -2.24
SSH4P32343 RPL26BYGR034W 384 nt1.02□□□□□ -2.25
SSH4P32343 ASE1YOR058C 2658 nt1.02□□□□□ -2.25
SSH4P32343 PAM16YJL104W 450 nt0.99□□□□□ -2.25
SSH4P32343 YNL028WYNL028W 318 nt0.98□□□□□ -2.25
SSH4P32343 YAL067W-AYAL067W-A 228 nt0.96□□□□□ -2.26
SSH4P32343 BEM2YER155C 6504 nt0.96□□□□□ -2.26
SSH4P32343 YFR012W-AYFR012W-A 87 nt0.95□□□□□ -2.26
SSH4P32343 RPS30BYOR182C 192 nt0.95□□□□□ -2.26
SSH4P32343 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
SSH4P32343 UTP20YBL004W 7482 nt0.93□□□□□ -2.26
SSH4P32343 YDR354C-AYDR354C-A 144 nt0.93□□□□□ -2.26
SSH4P32343 YHR063W-AYHR063W-A 336 nt0.93□□□□□ -2.26
SSH4P32343 YJL026C-AYJL026C-A 222 nt0.93□□□□□ -2.26
SSH4P32343 SEC8YPR055W 3198 nt0.93□□□□□ -2.26
SSH4P32343 DOP1YDR141C 5097 nt0.92□□□□□ -2.26
SSH4P32343 NPR2YEL062W 1848 nt0.91□□□□□ -2.26
SSH4P32343 Q0142Q0142 177 nt0.9□□□□□ -2.27
SSH4P32343 YJL197C-AYJL197C-A 282 nt0.9□□□□□ -2.27
SSH4P32343 CHS6YJL099W 2241 nt0.89□□□□□ -2.27
SSH4P32343 LTE1YAL024C 4308 nt0.89□□□□□ -2.27
SSH4P32343 YLR120W-AYLR120W-A 102 nt0.89□□□□□ -2.27
SSH4P32343 RAD61YDR014W 1944 nt0.89□□□□□ -2.27
SSH4P32343 YDL185C-AYDL185C-A 228 nt0.88□□□□□ -2.27
SSH4P32343 YLR399W-AYLR399W-A 105 nt0.88□□□□□ -2.27
SSH4P32343 YMR307C-AYMR307C-A 195 nt0.88□□□□□ -2.27
SSH4P32343 YOR015WYOR015W 360 nt0.88□□□□□ -2.27
SSH4P32343 YPR160W-AYPR160W-A 81 nt0.88□□□□□ -2.27
SSH4P32343 SEC1YDR164C 2175 nt0.88□□□□□ -2.27
SSH4P32343 HAL9YOL089C 3093 nt0.88□□□□□ -2.27
SSH4P32343 YMR031W-AYMR031W-A 327 nt0.87□□□□□ -2.27
SSH4P32343 YCR018C-AYCR018C-A 255 nt0.86□□□□□ -2.27
SSH4P32343 YEL020C-BYEL020C-B 198 nt0.86□□□□□ -2.27
SSH4P32343 YOR008C-AYOR008C-A 225 nt0.86□□□□□ -2.27
SSH4P32343 FYV10YIL097W 1551 nt0.85□□□□□ -2.27
SSH4P32343 snR190snR190 190 nt0.85□□□□□ -2.27
SSH4P32343 tF(GAA)BtF(GAA)B 73 nt0.84□□□□□ -2.27
SSH4P32343 tF(GAA)FtF(GAA)F 73 nt0.84□□□□□ -2.27
SSH4P32343 tF(GAA)GtF(GAA)G 73 nt0.84□□□□□ -2.27
SSH4P32343 tF(GAA)H1tF(GAA)H1 73 nt0.84□□□□□ -2.27
SSH4P32343 tF(GAA)H2tF(GAA)H2 73 nt0.84□□□□□ -2.27
SSH4P32343 tF(GAA)MtF(GAA)M 73 nt0.84□□□□□ -2.27
SSH4P32343 tF(GAA)P1tF(GAA)P1 73 nt0.84□□□□□ -2.27
SSH4P32343 tF(GAA)P2tF(GAA)P2 73 nt0.84□□□□□ -2.27
SSH4P32343 PAU12YGR294W 363 nt0.83□□□□□ -2.28
SSH4P32343 YIL142C-AYIL142C-A 333 nt0.83□□□□□ -2.28
SSH4P32343 YMR172C-AYMR172C-A 384 nt0.83□□□□□ -2.28
SSH4P32343 YNL277W-AYNL277W-A 189 nt0.83□□□□□ -2.28
SSH4P32343 PAU24YBR301W 363 nt0.83□□□□□ -2.28
SSH4P32343 snR65snR65 100 nt0.82□□□□□ -2.28
SSH4P32343 PRP5YBR237W 2550 nt0.82□□□□□ -2.28
SSH4P32343 YGR069WYGR069W 336 nt0.81□□□□□ -2.28
SSH4P32343 YLL019W-AYLL019W-A 93 nt0.81□□□□□ -2.28
SSH4P32343 YOR072W-BYOR072W-B 162 nt0.81□□□□□ -2.28
SSH4P32343 BEM3YPL115C 3387 nt0.81□□□□□ -2.28
SSH4P32343 YML002WYML002W 2214 nt0.81□□□□□ -2.28
SSH4P32343 COX5BYIL111W 456 nt0.8□□□□□ -2.28
SSH4P32343 YNL146WYNL146W 303 nt0.8□□□□□ -2.28
SSH4P32343 YPR092WYPR092W 306 nt0.8□□□□□ -2.28
SSH4P32343 YGL052WYGL052W 306 nt0.79□□□□□ -2.28
SSH4P32343 YLR282CYLR282C 342 nt0.79□□□□□ -2.28
SSH4P32343 YPR159C-AYPR159C-A 102 nt0.79□□□□□ -2.28
SSH4P32343 OST4YDL232W 111 nt0.77□□□□□ -2.29
SSH4P32343 YMR160WYMR160W 2451 nt0.76□□□□□ -2.29
SSH4P32343 COY1YKL179C 2040 nt0.76□□□□□ -2.29
SSH4P32343 YJL127W-AYJL127W-A 117 nt0.75□□□□□ -2.29
SSH4P32343 YGL123C-AYGL123C-A 231 nt0.74□□□□□ -2.29
SSH4P32343 YKL100W-AYKL100W-A 90 nt0.74□□□□□ -2.29
SSH4P32343 YPR010C-AYPR010C-A 219 nt0.74□□□□□ -2.29
SSH4P32343 PRP42YDR235W 1635 nt0.74□□□□□ -2.29
SSH4P32343 QCR9YGR183C 201 nt0.73□□□□□ -2.29
SSH4P32343 YCR022CYCR022C 345 nt0.72□□□□□ -2.29
SSH4P32343 snR74snR74 88 nt0.72□□□□□ -2.29
SSH4P32343 BLI1YKL061W 342 nt0.72□□□□□ -2.29
SSH4P32343 ULI1YFR026C 510 nt0.71□□□□□ -2.3
SSH4P32343 YIL134C-AYIL134C-A 204 nt0.7□□□□□ -2.3
SSH4P32343 YOR161W-AYOR161W-A 81 nt0.7□□□□□ -2.3
SSH4P32343 YSP1YHR155W 3687 nt0.69□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 59.8 ms