Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 YIL032CYIL032C 357 nt0.78□□□□□ -2.28
RPB9P27999 YMR321CYMR321C 318 nt0.78□□□□□ -2.28
RPB9P27999 IES4YOR189W 351 nt0.78□□□□□ -2.28
RPB9P27999 YDR344CYDR344C 444 nt0.77□□□□□ -2.29
RPB9P27999 YHL042WYHL042W 453 nt0.77□□□□□ -2.29
RPB9P27999 YIL115W-AYIL115W-A 372 nt0.77□□□□□ -2.29
RPB9P27999 YMR193C-AYMR193C-A 387 nt0.77□□□□□ -2.29
RPB9P27999 CSE2YNR010W 450 nt0.77□□□□□ -2.29
RPB9P27999 SCC2YDR180W 4482 nt0.77□□□□□ -2.29
RPB9P27999 SPO21YOL091W 1830 nt0.77□□□□□ -2.29
RPB9P27999 YJL120WYJL120W 324 nt0.76□□□□□ -2.29
RPB9P27999 YOR218CYOR218C 420 nt0.76□□□□□ -2.29
RPB9P27999 VIK1YPL253C 1944 nt0.76□□□□□ -2.29
RPB9P27999 ISD11YER048W-A 285 nt0.75□□□□□ -2.29
RPB9P27999 YFL063WYFL063W 456 nt0.75□□□□□ -2.29
RPB9P27999 ALG13YGL047W 609 nt0.75□□□□□ -2.29
RPB9P27999 RPS27BYHR021C 249 nt0.75□□□□□ -2.29
RPB9P27999 RPL39YJL189W 156 nt0.75□□□□□ -2.29
RPB9P27999 YPL044CYPL044C 549 nt0.75□□□□□ -2.29
RPB9P27999 YDL196WYDL196W 330 nt0.74□□□□□ -2.29
RPB9P27999 PAA1YDR071C 576 nt0.74□□□□□ -2.29
RPB9P27999 YER097WYER097W 330 nt0.74□□□□□ -2.29
RPB9P27999 YIL142C-AYIL142C-A 333 nt0.74□□□□□ -2.29
RPB9P27999 YOR282WYOR282W 321 nt0.74□□□□□ -2.29
RPB9P27999 SGF11YPL047W 300 nt0.74□□□□□ -2.29
RPB9P27999 MCM10YIL150C 1716 nt0.73□□□□□ -2.29
RPB9P27999 CMC4YMR194C-B 222 nt0.73□□□□□ -2.29
RPB9P27999 COG8YML071C 1824 nt0.73□□□□□ -2.29
RPB9P27999 YOL014WYOL014W 375 nt0.72□□□□□ -2.29
RPB9P27999 BEM2YER155C 6504 nt0.72□□□□□ -2.29
RPB9P27999 STE5YDR103W 2754 nt0.72□□□□□ -2.29
RPB9P27999 YJR029WYJR029W 5268 nt0.72□□□□□ -2.29
RPB9P27999 YPR137C-BYPR137C-B 5268 nt0.72□□□□□ -2.29
RPB9P27999 NOP9YJL010C 2001 nt0.71□□□□□ -2.3
RPB9P27999 YMR160WYMR160W 2451 nt0.71□□□□□ -2.3
RPB9P27999 YNL211CYNL211C 261 nt0.7□□□□□ -2.3
RPB9P27999 KAP120YPL125W 3099 nt0.7□□□□□ -2.3
RPB9P27999 RPL26BYGR034W 384 nt0.69□□□□□ -2.3
RPB9P27999 YNL028WYNL028W 318 nt0.69□□□□□ -2.3
RPB9P27999 YDL073WYDL073W 2955 nt0.68□□□□□ -2.3
RPB9P27999 BFR2YDR299W 1605 nt0.67□□□□□ -2.3
RPB9P27999 Q0142Q0142 177 nt0.67□□□□□ -2.3
RPB9P27999 YMR031W-AYMR031W-A 327 nt0.67□□□□□ -2.3
RPB9P27999 YPR117WYPR117W 7470 nt0.67□□□□□ -2.3
RPB9P27999 YHR063W-AYHR063W-A 336 nt0.66□□□□□ -2.3
RPB9P27999 YKL145W-AYKL145W-A 93 nt0.65□□□□□ -2.31
RPB9P27999 YCR018C-AYCR018C-A 255 nt0.64□□□□□ -2.31
RPB9P27999 PMP1YCR024C-A 123 nt0.64□□□□□ -2.31
RPB9P27999 RAD61YDR014W 1944 nt0.64□□□□□ -2.31
RPB9P27999 NPR2YEL062W 1848 nt0.64□□□□□ -2.31
RPB9P27999 RKR1YMR247C 4689 nt0.63□□□□□ -2.31
RPB9P27999 YDR354C-AYDR354C-A 144 nt0.63□□□□□ -2.31
RPB9P27999 YFR012W-AYFR012W-A 87 nt0.62□□□□□ -2.31
RPB9P27999 YJL197C-AYJL197C-A 282 nt0.62□□□□□ -2.31
RPB9P27999 YGR069WYGR069W 336 nt0.61□□□□□ -2.31
RPB9P27999 YAL067W-AYAL067W-A 228 nt0.61□□□□□ -2.31
RPB9P27999 YOR008C-AYOR008C-A 225 nt0.6□□□□□ -2.31
RPB9P27999 YOR072W-BYOR072W-B 162 nt0.6□□□□□ -2.31
RPB9P27999 SEC8YPR055W 3198 nt0.59□□□□□ -2.31
RPB9P27999 SEC1YDR164C 2175 nt0.59□□□□□ -2.31
RPB9P27999 YLL019W-AYLL019W-A 93 nt0.59□□□□□ -2.31
RPB9P27999 YMR307C-AYMR307C-A 195 nt0.59□□□□□ -2.31
RPB9P27999 YNL146WYNL146W 303 nt0.59□□□□□ -2.31
RPB9P27999 PRP16YKR086W 3216 nt0.59□□□□□ -2.32
RPB9P27999 BIR1YJR089W 2865 nt0.58□□□□□ -2.32
RPB9P27999 snR65snR65 100 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)BtT(AGU)B 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)CtT(AGU)C 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)DtT(AGU)D 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)HtT(AGU)H 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)I1tT(AGU)I1 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)I2tT(AGU)I2 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)JtT(AGU)J 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)N1tT(AGU)N1 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)N2tT(AGU)N2 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)O1tT(AGU)O1 73 nt0.58□□□□□ -2.32
RPB9P27999 tT(AGU)O2tT(AGU)O2 73 nt0.58□□□□□ -2.32
RPB9P27999 YLR120W-AYLR120W-A 102 nt0.58□□□□□ -2.32
RPB9P27999 snR190snR190 190 nt0.58□□□□□ -2.32
RPB9P27999 YML002WYML002W 2214 nt0.57□□□□□ -2.32
RPB9P27999 YDL185C-AYDL185C-A 228 nt0.57□□□□□ -2.32
RPB9P27999 YEL020C-BYEL020C-B 198 nt0.57□□□□□ -2.32
RPB9P27999 YGL052WYGL052W 306 nt0.57□□□□□ -2.32
RPB9P27999 YJL026C-AYJL026C-A 222 nt0.57□□□□□ -2.32
RPB9P27999 YNL277W-AYNL277W-A 189 nt0.57□□□□□ -2.32
RPB9P27999 YPR092WYPR092W 306 nt0.57□□□□□ -2.32
RPB9P27999 CHS6YJL099W 2241 nt0.57□□□□□ -2.32
RPB9P27999 COX5BYIL111W 456 nt0.56□□□□□ -2.32
RPB9P27999 YOR015WYOR015W 360 nt0.56□□□□□ -2.32
RPB9P27999 YLR399W-AYLR399W-A 105 nt0.55□□□□□ -2.32
RPB9P27999 YPR159C-AYPR159C-A 102 nt0.55□□□□□ -2.32
RPB9P27999 YPR160W-AYPR160W-A 81 nt0.55□□□□□ -2.32
RPB9P27999 COY1YKL179C 2040 nt0.54□□□□□ -2.32
RPB9P27999 YLR282CYLR282C 342 nt0.54□□□□□ -2.32
RPB9P27999 ASE1YOR058C 2658 nt0.53□□□□□ -2.32
RPB9P27999 TRS65YGR166W 1683 nt0.53□□□□□ -2.32
RPB9P27999 BLI1YKL061W 342 nt0.53□□□□□ -2.32
RPB9P27999 YGL123C-AYGL123C-A 231 nt0.52□□□□□ -2.33
RPB9P27999 YKL100W-AYKL100W-A 90 nt0.52□□□□□ -2.33
RPB9P27999 YMR172C-AYMR172C-A 384 nt0.52□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 52 ms