Protein–RNA interactions for Protein: P0CX58

TY1A-PR1, Transposon Ty1-PR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR1P0CX58 YGL063C-AYGL063C-A 150 nt2.44□□□□□ -2.02
TY1A-PR1P0CX58 SLN1YIL147C 3663 nt2.44□□□□□ -2.02
TY1A-PR1P0CX58 RAD50YNL250W 3939 nt2.42□□□□□ -2.02
TY1A-PR1P0CX58 IES6YEL044W 501 nt2.42□□□□□ -2.02
TY1A-PR1P0CX58 AZF1YOR113W 2745 nt2.42□□□□□ -2.02
TY1A-PR1P0CX58 ESC1YMR219W 4977 nt2.42□□□□□ -2.02
TY1A-PR1P0CX58 BEM3YPL115C 3387 nt2.41□□□□□ -2.02
TY1A-PR1P0CX58 UBP3YER151C 2739 nt2.41□□□□□ -2.02
TY1A-PR1P0CX58 TOP2YNL088W 4287 nt2.41□□□□□ -2.02
TY1A-PR1P0CX58 TRA1YHR099W 11235 nt2.41□□□□□ -2.02
TY1A-PR1P0CX58 KIP1YBL063W 3336 nt2.4□□□□□ -2.03
TY1A-PR1P0CX58 HIR3YJR140C 4947 nt2.4□□□□□ -2.03
TY1A-PR1P0CX58 AXL1YPR122W 3627 nt2.4□□□□□ -2.03
TY1A-PR1P0CX58 RAV1YJR033C 4074 nt2.39□□□□□ -2.03
TY1A-PR1P0CX58 YLR299C-AYLR299C-A 93 nt2.39□□□□□ -2.03
TY1A-PR1P0CX58 YBL005W-BYBL005W-B 5268 nt2.39□□□□□ -2.03
TY1A-PR1P0CX58 TDA9YML081W 3756 nt2.39□□□□□ -2.03
TY1A-PR1P0CX58 MSH6YDR097C 3729 nt2.39□□□□□ -2.03
TY1A-PR1P0CX58 tD(GUC)QtD(GUC)Q 75 nt2.38□□□□□ -2.03
TY1A-PR1P0CX58 YJL052C-AYJL052C-A 120 nt2.38□□□□□ -2.03
TY1A-PR1P0CX58 HSL1YKL101W 4557 nt2.38□□□□□ -2.03
TY1A-PR1P0CX58 PIK1YNL267W 3201 nt2.37□□□□□ -2.03
TY1A-PR1P0CX58 ANS1YHR126C 480 nt2.37□□□□□ -2.03
TY1A-PR1P0CX58 YOL019W-AYOL019W-A 153 nt2.37□□□□□ -2.03
TY1A-PR1P0CX58 YIL082W-AYIL082W-A 4497 nt2.37□□□□□ -2.03
TY1A-PR1P0CX58 MSB2YGR014W 3921 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 SUP56tL(CAA)A 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 SUP53tL(CAA)C 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 tL(CAA)DtL(CAA)D 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 tL(CAA)G1tL(CAA)G1 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 SUP54tL(CAA)G2 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 tL(CAA)G3tL(CAA)G3 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 tL(CAA)KtL(CAA)K 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 tL(CAA)LtL(CAA)L 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 tL(CAA)MtL(CAA)M 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 tL(CAA)NtL(CAA)N 82 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YDR098C-BYDR098C-B 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YDR210C-DYDR210C-D 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YDR316W-BYDR316W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YDR365W-BYDR365W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YER138CYER138C 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YER160CYER160C 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YGR038C-BYGR038C-B 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YGR161C-DYGR161C-D 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YJR027WYJR027W 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YLR157C-BYLR157C-B 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YML039WYML039W 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YML045WYML045W 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YMR050CYMR050C 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YOL103W-BYOL103W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YBR012W-BYBR012W-B 5271 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YOR142W-BYOR142W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YPL257W-BYPL257W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 YPR158W-BYPR158W-B 5271 nt2.36□□□□□ -2.03
TY1A-PR1P0CX58 RPA190YOR341W 4995 nt2.35□□□□□ -2.03
TY1A-PR1P0CX58 EMC5YIL027C 426 nt2.35□□□□□ -2.03
TY1A-PR1P0CX58 YDL073WYDL073W 2955 nt2.34□□□□□ -2.03
TY1A-PR1P0CX58 TOR1YJR066W 7413 nt2.34□□□□□ -2.03
TY1A-PR1P0CX58 HER1YOR227W 3741 nt2.34□□□□□ -2.04
TY1A-PR1P0CX58 KRE33YNL132W 3171 nt2.34□□□□□ -2.04
TY1A-PR1P0CX58 KOG1YHR186C 4674 nt2.33□□□□□ -2.04
TY1A-PR1P0CX58 NNF2YGR089W 2811 nt2.32□□□□□ -2.04
TY1A-PR1P0CX58 ESL2YKR096W 3588 nt2.32□□□□□ -2.04
TY1A-PR1P0CX58 YIL169CYIL169C 2988 nt2.32□□□□□ -2.04
TY1A-PR1P0CX58 RPL41AYDL184C 78 nt2.3□□□□□ -2.04
TY1A-PR1P0CX58 NUM1YDR150W 8247 nt2.3□□□□□ -2.04
TY1A-PR1P0CX58 YMR122W-AYMR122W-A 255 nt2.29□□□□□ -2.04
TY1A-PR1P0CX58 PRP16YKR086W 3216 nt2.29□□□□□ -2.04
TY1A-PR1P0CX58 SKI7YOR076C 2244 nt2.29□□□□□ -2.04
TY1A-PR1P0CX58 BRE1YDL074C 2103 nt2.29□□□□□ -2.04
TY1A-PR1P0CX58 PSD2YGR170W 3417 nt2.27□□□□□ -2.05
TY1A-PR1P0CX58 MYO4YAL029C 4416 nt2.27□□□□□ -2.05
TY1A-PR1P0CX58 YDL159C-BYDL159C-B 177 nt2.27□□□□□ -2.05
TY1A-PR1P0CX58 YHR180C-BYHR180C-B 105 nt2.27□□□□□ -2.05
TY1A-PR1P0CX58 YDL159W-AYDL159W-A 132 nt2.26□□□□□ -2.05
TY1A-PR1P0CX58 MGA2YIR033W 3342 nt2.26□□□□□ -2.05
TY1A-PR1P0CX58 tK(UUU)DtK(UUU)D 73 nt2.25□□□□□ -2.05
TY1A-PR1P0CX58 tK(UUU)G1tK(UUU)G1 73 nt2.25□□□□□ -2.05
TY1A-PR1P0CX58 tK(UUU)G2tK(UUU)G2 73 nt2.25□□□□□ -2.05
TY1A-PR1P0CX58 tK(UUU)KtK(UUU)K 73 nt2.25□□□□□ -2.05
TY1A-PR1P0CX58 tK(UUU)LtK(UUU)L 73 nt2.25□□□□□ -2.05
TY1A-PR1P0CX58 tK(UUU)OtK(UUU)O 73 nt2.25□□□□□ -2.05
TY1A-PR1P0CX58 tK(UUU)PtK(UUU)P 73 nt2.25□□□□□ -2.05
TY1A-PR1P0CX58 SPF1YEL031W 3648 nt2.24□□□□□ -2.05
TY1A-PR1P0CX58 STO1YMR125W 2586 nt2.24□□□□□ -2.05
TY1A-PR1P0CX58 YLR422WYLR422W 5799 nt2.23□□□□□ -2.05
TY1A-PR1P0CX58 ARP8YOR141C 2646 nt2.23□□□□□ -2.05
TY1A-PR1P0CX58 YBR296C-AYBR296C-A 120 nt2.22□□□□□ -2.05
TY1A-PR1P0CX58 STH1YIL126W 4080 nt2.22□□□□□ -2.05
TY1A-PR1P0CX58 GEA2YEL022W 4380 nt2.21□□□□□ -2.05
TY1A-PR1P0CX58 SXM1YDR395W 2835 nt2.21□□□□□ -2.06
TY1A-PR1P0CX58 RGC1YPR115W 3252 nt2.21□□□□□ -2.06
TY1A-PR1P0CX58 snR14snR14 160 nt2.21□□□□□ -2.06
TY1A-PR1P0CX58 YPR160W-AYPR160W-A 81 nt2.21□□□□□ -2.06
TY1A-PR1P0CX58 EST1YLR233C 2100 nt2.2□□□□□ -2.06
TY1A-PR1P0CX58 SMC4YLR086W 4257 nt2.2□□□□□ -2.06
TY1A-PR1P0CX58 SEC8YPR055W 3198 nt2.2□□□□□ -2.06
TY1A-PR1P0CX58 APL3YBL037W 3078 nt2.2□□□□□ -2.06
TY1A-PR1P0CX58 YOR055WYOR055W 435 nt2.19□□□□□ -2.06
TY1A-PR1P0CX58 CDC25YLR310C 4770 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 28.9 ms