Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINC00271P0C7V0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
LINC00271P0C7V0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINC00271P0C7V0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.31■■□□□ 1
LINC00271P0C7V0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.31■■□□□ 1
LINC00271P0C7V0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.31■■□□□ 1
LINC00271P0C7V0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.31■■□□□ 1
LINC00271P0C7V0 AP005242.2-201ENST00000580065 1175 ntBASIC21.31■■□□□ 1
LINC00271P0C7V0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
LINC00271P0C7V0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.31■■□□□ 1
LINC00271P0C7V0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.31■■□□□ 1
LINC00271P0C7V0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
LINC00271P0C7V0 KRT8P20-201ENST00000423953 1409 ntBASIC21.3■■□□□ 1
LINC00271P0C7V0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
LINC00271P0C7V0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.3■■□□□ 1
LINC00271P0C7V0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINC00271P0C7V0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINC00271P0C7V0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINC00271P0C7V0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LINC00271P0C7V0 AC026271.3-201ENST00000571884 352 ntBASIC21.3■■□□□ 1
LINC00271P0C7V0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.3■■□□□ 1
LINC00271P0C7V0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
LINC00271P0C7V0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.3■■□□□ 1
LINC00271P0C7V0 AL445675.2-201ENST00000620291 557 ntBASIC21.3■■□□□ 1
LINC00271P0C7V0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LINC00271P0C7V0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LINC00271P0C7V0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.3■■□□□ 1
LINC00271P0C7V0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.3■■□□□ 1
LINC00271P0C7V0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.29■■□□□ 1
LINC00271P0C7V0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
LINC00271P0C7V0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
LINC00271P0C7V0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.29■■□□□ 1
LINC00271P0C7V0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
LINC00271P0C7V0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 B3GAT3P1-201ENST00000471720 806 ntBASIC21.29■■□□□ 1
LINC00271P0C7V0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
LINC00271P0C7V0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.29■■□□□ 1
LINC00271P0C7V0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 AL031985.4-201ENST00000642138 673 ntBASIC21.29■■□□□ 1
LINC00271P0C7V0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LINC00271P0C7V0 AL121603.2-201ENST00000557373 2117 ntBASIC21.29■■□□□ 1
LINC00271P0C7V0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.29■■□□□ 1
LINC00271P0C7V0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LINC00271P0C7V0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LINC00271P0C7V0 AL024507.2-201ENST00000606070 2574 ntBASIC21.28■■□□□ 1
LINC00271P0C7V0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LINC00271P0C7V0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.28■■□□□ 1
LINC00271P0C7V0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LINC00271P0C7V0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LINC00271P0C7V0 TSPY14P-201ENST00000303979 915 ntBASIC21.28■■□□□ 1
LINC00271P0C7V0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.28■■□□□ 1
LINC00271P0C7V0 AC011506.1-201ENST00000474329 610 ntBASIC21.28■■□□□ 1
LINC00271P0C7V0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.28■■□□□ 1
LINC00271P0C7V0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.28■■□□□ 1
LINC00271P0C7V0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LINC00271P0C7V0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.28■■□□□ 1
LINC00271P0C7V0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.28■■□□□ 1
LINC00271P0C7V0 AL049796.1-201ENST00000565336 1766 ntBASIC21.28■■□□□ 1
LINC00271P0C7V0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.28■■□□□ 1
LINC00271P0C7V0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LINC00271P0C7V0 FSCN1P1-201ENST00000568912 1481 ntBASIC21.27■■□□□ 1
LINC00271P0C7V0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.27■■□□□ 1
LINC00271P0C7V0 AC121338.2-201ENST00000622535 1744 ntBASIC21.27■■□□□ 1
LINC00271P0C7V0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC00271P0C7V0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.27■■□□□ 1
LINC00271P0C7V0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.27■■□□□ 1
LINC00271P0C7V0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.27■■□□□ 1
LINC00271P0C7V0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.27■■□□□ 1
LINC00271P0C7V0 INGX-201ENST00000359239 846 ntBASIC21.27■■□□□ 1
LINC00271P0C7V0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC00271P0C7V0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.27■■□□□ 1
LINC00271P0C7V0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.27■■□□□ 1
LINC00271P0C7V0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LINC00271P0C7V0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.27■■□□□ 1
LINC00271P0C7V0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LINC00271P0C7V0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LINC00271P0C7V0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
LINC00271P0C7V0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.26■□□□□ 0.99
LINC00271P0C7V0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 ECEL1P2-202ENST00000465689 757 ntBASIC21.26■□□□□ 0.99
LINC00271P0C7V0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 EGLN1P1-201ENST00000531623 762 ntBASIC21.26■□□□□ 0.99
LINC00271P0C7V0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms