Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 AL390955.1-201ENST00000428694 934 ntBASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 AL121906.2-201ENST00000621597 723 ntBASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHAC2Q9Y5I4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
PCDHAC2Q9Y5I4 PLK5-205ENST00000642079 1969 ntBASIC24.02■■□□□ 1.43
PCDHAC2Q9Y5I4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 NUDT16P1-203ENST00000513809 620 ntBASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHAC2Q9Y5I4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 KRT18P35-201ENST00000510488 1269 ntBASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHAC2Q9Y5I4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 AL353807.1-201ENST00000427475 662 ntBASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 CYP2D8P-201ENST00000433633 1490 ntBASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHAC2Q9Y5I4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 MIR1238-201ENST00000408483 83 ntBASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PCDHAC2Q9Y5I4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 FEM1AP4-201ENST00000443167 1987 ntBASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHAC2Q9Y5I4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 AC145285.6-201ENST00000604632 637 ntBASIC23.96■■□□□ 1.43
PCDHAC2Q9Y5I4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms