Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.61□□□□□ -0.231e-6■■■□□ 18.2
EXOSC5Q9NQT4 FIP1L1-212ENST00000513975 1464 ntTSL 211.44□□□□□ -0.581e-6■■■□□ 18.2
EXOSC5Q9NQT4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.823e-6■■■□□ 18.2
EXOSC5Q9NQT4 AC138409.2-204ENST00000512782 1398 ntTSL 1 (best)2.72□□□□□ -1.973e-7■■■□□ 18.2
EXOSC5Q9NQT4 CDYL-202ENST00000343762 3241 ntTSL 1 (best) BASIC10.39□□□□□ -0.754e-6■■■□□ 18.2
EXOSC5Q9NQT4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.322e-6■■■□□ 18.1
EXOSC5Q9NQT4 SAFB2-211ENST00000592599 2260 ntTSL 211.55□□□□□ -0.562e-6■■■□□ 18.1
EXOSC5Q9NQT4 SAFB2-210ENST00000591310 722 ntTSL 311.32□□□□□ -0.62e-6■■■□□ 18.1
EXOSC5Q9NQT4 SAFB2-209ENST00000591123 836 ntTSL 59.77□□□□□ -0.852e-6■■■□□ 18.1
EXOSC5Q9NQT4 SAFB2-207ENST00000591101 551 ntTSL 27.28□□□□□ -1.242e-6■■■□□ 18.1
EXOSC5Q9NQT4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.145e-9■■■□□ 18.1
EXOSC5Q9NQT4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.095e-9■■■□□ 18.1
EXOSC5Q9NQT4 PHRF1-206ENST00000534320 5178 ntTSL 515.5■□□□□ 0.075e-9■■■□□ 18.1
EXOSC5Q9NQT4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 05e-9■■■□□ 18.1
EXOSC5Q9NQT4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.145e-9■■■□□ 18.1
EXOSC5Q9NQT4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.89■□□□□ 0.614e-7■■■□□ 18.1
EXOSC5Q9NQT4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.294e-7■■■□□ 18.1
EXOSC5Q9NQT4 ATL2-211ENST00000456736 578 ntTSL 313.33□□□□□ -0.282e-6■■■□□ 18.1
EXOSC5Q9NQT4 ATL2-208ENST00000449130 526 ntTSL 312.81□□□□□ -0.362e-6■■■□□ 18.1
EXOSC5Q9NQT4 ATL2-212ENST00000472097 561 ntTSL 312.66□□□□□ -0.382e-6■■■□□ 18.1
EXOSC5Q9NQT4 ATL2-209ENST00000451483 576 ntTSL 410.98□□□□□ -0.652e-6■■■□□ 18.1
EXOSC5Q9NQT4 ATL2-207ENST00000443098 775 ntTSL 59.38□□□□□ -0.912e-6■■■□□ 18.1
EXOSC5Q9NQT4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.39□□□□□ -0.273e-8■■■□□ 18.1
EXOSC5Q9NQT4 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.622e-6■■■□□ 18.1
EXOSC5Q9NQT4 PPP4R1-203ENST00000400556 3925 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.932e-6■■■□□ 18.1
EXOSC5Q9NQT4 PPP4R1-201ENST00000285124 2917 ntTSL 58.17□□□□□ -1.12e-6■■■□□ 18.1
EXOSC5Q9NQT4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.24□□□□□ -1.573e-8■■■□□ 18.1
EXOSC5Q9NQT4 ASXL1-205ENST00000497249 296 ntTSL 53.18□□□□□ -1.93e-8■■■□□ 18.1
EXOSC5Q9NQT4 SND1-209ENST00000470723 568 ntTSL 410.4□□□□□ -0.749e-7■■■□□ 18.1
EXOSC5Q9NQT4 PPP6R3-207ENST00000525050 513 ntTSL 34.18□□□□□ -1.742e-6■■■□□ 18
EXOSC5Q9NQT4 PPP6R3-213ENST00000527069 573 ntTSL 53.53□□□□□ -1.842e-6■■■□□ 18
EXOSC5Q9NQT4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.451e-6■■■□□ 17.9
EXOSC5Q9NQT4 LINC01446-201ENST00000380970 3484 ntTSL 2 BASIC10.08□□□□□ -0.81e-6■■■□□ 17.9
EXOSC5Q9NQT4 RPS7-205ENST00000462576 907 ntTSL 1 (best)20.9■□□□□ 0.947e-7■■■□□ 17.9
EXOSC5Q9NQT4 RPS7-209ENST00000491937 987 ntTSL 220.89■□□□□ 0.937e-7■■■□□ 17.9
EXOSC5Q9NQT4 RPS7-208ENST00000481006 5429 ntTSL 1 (best)14.46□□□□□ -0.097e-7■■■□□ 17.9
EXOSC5Q9NQT4 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.637e-7■■■□□ 17.9
EXOSC5Q9NQT4 RPS7-203ENST00000406376 704 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.967e-7■■■□□ 17.9
EXOSC5Q9NQT4 RPS7-204ENST00000407445 833 ntTSL 2 BASIC7.41□□□□□ -1.227e-7■■■□□ 17.9
EXOSC5Q9NQT4 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.477e-7■■■□□ 17.9
EXOSC5Q9NQT4 VWDE-203ENST00000452576 5936 ntTSL 1 (best)11.48□□□□□ -0.571e-7■■■□□ 17.9
EXOSC5Q9NQT4 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.681e-7■■■□□ 17.9
EXOSC5Q9NQT4 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC10.47□□□□□ -0.731e-7■■■□□ 17.9
EXOSC5Q9NQT4 VWDE-205ENST00000521169 4700 ntTSL 510.47□□□□□ -0.731e-7■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-202ENST00000398761 2488 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.672e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-212ENST00000642044 2221 ntBASIC10.26□□□□□ -0.772e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-211ENST00000635239 2215 ntTSL 5 BASIC10.14□□□□□ -0.792e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-201ENST00000361114 2383 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.812e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-209ENST00000604238 1268 ntTSL 59.5□□□□□ -0.892e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-205ENST00000476605 1933 ntTSL 29□□□□□ -0.972e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-207ENST00000603011 774 ntTSL 58.42□□□□□ -1.062e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-203ENST00000398763 1224 ntTSL 2 BASIC6.87□□□□□ -1.312e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-204ENST00000418483 1212 ntTSL 2 BASIC6.56□□□□□ -1.362e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-206ENST00000489666 579 ntTSL 46.44□□□□□ -1.382e-6■■■□□ 17.9
EXOSC5Q9NQT4 MICU1-210ENST00000604529 554 ntTSL 43.4□□□□□ -1.872e-6■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-202ENST00000325997 2235 ntTSL 1 (best)17.79■□□□□ 0.448e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-211ENST00000470731 2251 ntTSL 1 (best)17.45■□□□□ 0.388e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-205ENST00000415271 899 ntTSL 516.56■□□□□ 0.248e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.018e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.068e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.158e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.168e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.188e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-208ENST00000423395 543 ntTSL 513.18□□□□□ -0.38e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.338e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.398e-8■■■□□ 17.9
EXOSC5Q9NQT4 IQCE-206ENST00000422276 541 ntTSL 512.08□□□□□ -0.488e-8■■■□□ 17.9
EXOSC5Q9NQT4 KANSL1-221ENST00000638902 1971 ntTSL 211.54□□□□□ -0.562e-8■■■□□ 17.9
EXOSC5Q9NQT4 RTN4-210ENST00000427710 589 ntTSL 411.7□□□□□ -0.541e-7■■■□□ 17.8
EXOSC5Q9NQT4 USP22-209ENST00000579645 1906 ntTSL 516.47■□□□□ 0.231e-6■■■□□ 17.7
EXOSC5Q9NQT4 USP22-204ENST00000476111 573 ntTSL 314.3□□□□□ -0.121e-6■■■□□ 17.7
EXOSC5Q9NQT4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.41e-6■■■□□ 17.7
EXOSC5Q9NQT4 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.481e-6■■■□□ 17.7
EXOSC5Q9NQT4 USP22-211ENST00000584538 554 ntTSL 49.62□□□□□ -0.871e-6■■■□□ 17.7
EXOSC5Q9NQT4 USP22-202ENST00000455117 677 ntTSL 57.98□□□□□ -1.131e-6■■■□□ 17.7
EXOSC5Q9NQT4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.231e-6■■■□□ 17.7
EXOSC5Q9NQT4 LRRD1-202ENST00000422722 3511 ntTSL 210.8□□□□□ -0.681e-6■■■□□ 17.7
EXOSC5Q9NQT4 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.39□□□□□ -1.551e-6■■■□□ 17.7
EXOSC5Q9NQT4 BCR-214ENST00000487679 231 ntTSL 1 (best)6.79□□□□□ -1.324e-15■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-218ENST00000522535 653 ntTSL 418.39■□□□□ 0.535e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-206ENST00000518254 755 ntTSL 511.18□□□□□ -0.625e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-211ENST00000520329 836 ntTSL 511.18□□□□□ -0.625e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-223ENST00000524169 784 ntTSL 310.64□□□□□ -0.715e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.125e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-207ENST00000518397 830 ntTSL 57.79□□□□□ -1.165e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-222ENST00000524099 569 ntTSL 45.21□□□□□ -1.585e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.585e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-209ENST00000519439 658 ntTSL 35.01□□□□□ -1.615e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-215ENST00000521557 601 ntTSL 44.43□□□□□ -1.75e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-219ENST00000523473 654 ntTSL 44.27□□□□□ -1.735e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-213ENST00000521095 579 ntTSL 34.09□□□□□ -1.755e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-216ENST00000522150 573 ntTSL 53.96□□□□□ -1.785e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-220ENST00000523925 529 ntTSL 33.72□□□□□ -1.815e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-210ENST00000519636 575 ntTSL 52.35□□□□□ -2.035e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-214ENST00000521484 556 ntTSL 42.35□□□□□ -2.035e-8■■■□□ 17.7
EXOSC5Q9NQT4 PPP2R2A-217ENST00000522482 576 ntTSL 42.2□□□□□ -2.065e-8■■■□□ 17.7
EXOSC5Q9NQT4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.13■□□□□ 0.976e-7■■■□□ 17.7
EXOSC5Q9NQT4 FEZ2-210ENST00000451623 1869 ntTSL 1 (best)20.58■□□□□ 0.886e-7■■■□□ 17.7
EXOSC5Q9NQT4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.816e-7■■■□□ 17.7
EXOSC5Q9NQT4 FEZ2-207ENST00000414288 556 ntTSL 45.96□□□□□ -1.466e-7■■■□□ 17.7
Retrieved 100 of 8,799 protein–RNA pairs in 291.9 ms