Protein–RNA interactions for Protein: P89113

DDR2, Protein DDR2, yeast

Predictions only

Length 61 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
DDR2	P89113	APQ13	YJL075C	417 nt		-1.94	□□□□□ -2.72
DDR2	P89113	YGL123C-A	YGL123C-A	231 nt		-1.95	□□□□□ -2.72
DDR2	P89113	MRPL31	YKL138C	396 nt		-1.95	□□□□□ -2.72
DDR2	P89113	YLR041W	YLR041W	321 nt		-1.95	□□□□□ -2.72
DDR2	P89113	YOR161W-A	YOR161W-A	81 nt		-1.96	□□□□□ -2.72
DDR2	P89113	YJL182C	YJL182C	318 nt		-1.97	□□□□□ -2.72
DDR2	P89113	YAP6	YDR259C	1152 nt		-1.98	□□□□□ -2.73
DDR2	P89113	TDA2	YER071C	381 nt		-1.98	□□□□□ -2.73
DDR2	P89113	YHL046W-A	YHL046W-A	327 nt		-1.98	□□□□□ -2.73
DDR2	P89113	NUP82	YJL061W	2142 nt		-1.98	□□□□□ -2.73
DDR2	P89113	YMR158C-A	YMR158C-A	138 nt		-1.98	□□□□□ -2.73
DDR2	P89113	SKI7	YOR076C	2244 nt		-1.99	□□□□□ -2.73
DDR2	P89113	YCR024C-B	YCR024C-B	267 nt		-1.99	□□□□□ -2.73
DDR2	P89113	RUB1	YDR139C	234 nt		-1.99	□□□□□ -2.73
DDR2	P89113	PSF2	YJL072C	642 nt		-1.99	□□□□□ -2.73
DDR2	P89113	YKL065W-A	YKL065W-A	222 nt		-1.99	□□□□□ -2.73
DDR2	P89113	YML047W-A	YML047W-A	366 nt		-1.99	□□□□□ -2.73
DDR2	P89113	YMR153C-A	YMR153C-A	336 nt		-1.99	□□□□□ -2.73
DDR2	P89113	RPF1	YHR088W	888 nt		-2.01	□□□□□ -2.73
DDR2	P89113	PAU9	YBL108C-A	129 nt		-2.01	□□□□□ -2.73
DDR2	P89113	YDR008C	YDR008C	351 nt		-2.02	□□□□□ -2.73
DDR2	P89113	SNU13	YEL026W	381 nt		-2.02	□□□□□ -2.73
DDR2	P89113	tY(GUA)Q	tY(GUA)Q	84 nt		-2.02	□□□□□ -2.73
DDR2	P89113	PCF11	YDR228C	1881 nt		-2.03	□□□□□ -2.73
DDR2	P89113	YER076W-A	YER076W-A	348 nt		-2.04	□□□□□ -2.74
DDR2	P89113	YFL063W	YFL063W	456 nt		-2.04	□□□□□ -2.74
DDR2	P89113	YIL032C	YIL032C	357 nt		-2.04	□□□□□ -2.74
DDR2	P89113	SUT2	YPR009W	807 nt		-2.04	□□□□□ -2.74
DDR2	P89113	YJL032W	YJL032W	315 nt		-2.06	□□□□□ -2.74
DDR2	P89113	YBL062W	YBL062W	381 nt		-2.06	□□□□□ -2.74
DDR2	P89113	YPR074W-A	YPR074W-A	171 nt		-2.06	□□□□□ -2.74
DDR2	P89113	YMR254C	YMR254C	309 nt		-2.08	□□□□□ -2.74
DDR2	P89113	YGL182C	YGL182C	324 nt		-2.09	□□□□□ -2.74
DDR2	P89113	GOS1	YHL031C	672 nt		-2.09	□□□□□ -2.74
DDR2	P89113	YLR271W	YLR271W	825 nt		-2.09	□□□□□ -2.74
DDR2	P89113	15S_rRNA	15S_rRNA	1649 nt		-2.09	□□□□□ -2.74
DDR2	P89113	APQ12	YIL040W	417 nt		-2.1	□□□□□ -2.75
DDR2	P89113	YMR290W-A	YMR290W-A	348 nt		-2.1	□□□□□ -2.75
DDR2	P89113	YOL029C	YOL029C	606 nt		-2.1	□□□□□ -2.75
DDR2	P89113	YJL135W	YJL135W	318 nt		-2.11	□□□□□ -2.75
DDR2	P89113	YKL068W-A	YKL068W-A	237 nt		-2.13	□□□□□ -2.75
DDR2	P89113	YML100W-A	YML100W-A	174 nt		-2.13	□□□□□ -2.75
DDR2	P89113	YOL160W	YOL160W	342 nt		-2.13	□□□□□ -2.75
DDR2	P89113	YBR051W	YBR051W	351 nt		-2.13	□□□□□ -2.75
DDR2	P89113	PAN3	YKL025C	2040 nt		-2.13	□□□□□ -2.75
DDR2	P89113	YLR171W	YLR171W	390 nt		-2.14	□□□□□ -2.75
DDR2	P89113	YER138W-A	YER138W-A	105 nt		-2.15	□□□□□ -2.75
DDR2	P89113	SDS22	YKL193C	1017 nt		-2.15	□□□□□ -2.75
DDR2	P89113	YLR154W-F	YLR154W-F	141 nt		-2.15	□□□□□ -2.75
DDR2	P89113	RPS20	YHL015W	366 nt		-2.16	□□□□□ -2.76
DDR2	P89113	YBL008W-A	YBL008W-A	240 nt		-2.16	□□□□□ -2.76
DDR2	P89113	YLR146W-A	YLR146W-A	189 nt		-2.17	□□□□□ -2.76
DDR2	P89113	TAR1	YLR154W-C	375 nt		-2.17	□□□□□ -2.76
DDR2	P89113	YNL067W-A	YNL067W-A	147 nt		-2.17	□□□□□ -2.76
DDR2	P89113	RPS10B	YMR230W	318 nt		-2.18	□□□□□ -2.76
DDR2	P89113	YPL182C	YPL182C	384 nt		-2.18	□□□□□ -2.76
DDR2	P89113	YPR099C	YPR099C	357 nt		-2.18	□□□□□ -2.76
DDR2	P89113	YDL185C-A	YDL185C-A	228 nt		-2.19	□□□□□ -2.76
DDR2	P89113	YER084W-A	YER084W-A	513 nt		-2.19	□□□□□ -2.76
DDR2	P89113	YGR204C-A	YGR204C-A	114 nt		-2.19	□□□□□ -2.76
DDR2	P89113	YHL041W	YHL041W	450 nt		-2.19	□□□□□ -2.76
DDR2	P89113	YKL111C	YKL111C	336 nt		-2.19	□□□□□ -2.76
DDR2	P89113	YGL006W-A	YGL006W-A	111 nt		-2.2	□□□□□ -2.76
DDR2	P89113	LRP1	YHR081W	555 nt		-2.2	□□□□□ -2.76
DDR2	P89113	RPL29	YFR032C-A	180 nt		-2.21	□□□□□ -2.76
DDR2	P89113	LIN1	YHR156C	1023 nt		-2.21	□□□□□ -2.76
DDR2	P89113	VAM3	YOR106W	852 nt		-2.21	□□□□□ -2.76
DDR2	P89113	SDH7	YDR511W	402 nt		-2.22	□□□□□ -2.76
DDR2	P89113	BLI1	YKL061W	342 nt		-2.22	□□□□□ -2.76
DDR2	P89113	SMD2	YLR275W	333 nt		-2.22	□□□□□ -2.76
DDR2	P89113	YML108W	YML108W	318 nt		-2.22	□□□□□ -2.76
DDR2	P89113	RRI2	YOL117W	1938 nt		-2.23	□□□□□ -2.77
DDR2	P89113	PBI2	YNL015W	228 nt		-2.23	□□□□□ -2.77
DDR2	P89113	YKL115C	YKL115C	393 nt		-2.25	□□□□□ -2.77
DDR2	P89113	LOC1	YFR001W	615 nt		-2.26	□□□□□ -2.77
DDR2	P89113	YMR307C-A	YMR307C-A	195 nt		-2.26	□□□□□ -2.77
DDR2	P89113	ATP20	YPR020W	348 nt		-2.26	□□□□□ -2.77
DDR2	P89113	snR79	snR79	84 nt		-2.27	□□□□□ -2.77
DDR2	P89113	YJL020W-A	YJL020W-A	258 nt		-2.27	□□□□□ -2.77
DDR2	P89113	snR49	snR49	165 nt		-2.27	□□□□□ -2.77
DDR2	P89113	YCR100C	YCR100C	951 nt		-2.28	□□□□□ -2.77
DDR2	P89113	YHR130C	YHR130C	336 nt		-2.29	□□□□□ -2.78
DDR2	P89113	YIL002W-A	YIL002W-A	210 nt		-2.3	□□□□□ -2.78
DDR2	P89113	YHL012W	YHL012W	1482 nt		-2.31	□□□□□ -2.78
DDR2	P89113	YGL042C	YGL042C	306 nt		-2.31	□□□□□ -2.78
DDR2	P89113	SPC24	YMR117C	642 nt		-2.31	□□□□□ -2.78
DDR2	P89113	YPR092W	YPR092W	306 nt		-2.31	□□□□□ -2.78
DDR2	P89113	YPR142C	YPR142C	564 nt		-2.32	□□□□□ -2.78
DDR2	P89113	DCP1	YOL149W	696 nt		-2.34	□□□□□ -2.78
DDR2	P89113	YCR018C-A	YCR018C-A	255 nt		-2.35	□□□□□ -2.79
DDR2	P89113	YIR044C	YIR044C	186 nt		-2.35	□□□□□ -2.79
DDR2	P89113	PMP2	YEL017C-A	132 nt		-2.36	□□□□□ -2.79
DDR2	P89113	YER158W-A	YER158W-A	216 nt		-2.36	□□□□□ -2.79
DDR2	P89113	AGA2	YGL032C	264 nt		-2.36	□□□□□ -2.79
DDR2	P89113	YOR170W	YOR170W	306 nt		-2.37	□□□□□ -2.79
DDR2	P89113	YDR269C	YDR269C	324 nt		-2.38	□□□□□ -2.79
DDR2	P89113	YPL068C	YPL068C	882 nt		-2.38	□□□□□ -2.79
DDR2	P89113	YBR126W-B	YBR126W-B	144 nt		-2.38	□□□□□ -2.79
DDR2	P89113	YBR072C-A	YBR072C-A	162 nt		-2.39	□□□□□ -2.79
DDR2	P89113	YLR264C-A	YLR264C-A	117 nt		-2.4	□□□□□ -2.79

Retrieved 100 of 7,029 protein–RNA pairs in 48.2 ms