Protein–RNA interactions for Protein: P53115

INO80, Chromatin-remodeling ATPase INO80, yeastyeast

Predictions only

Length 1,489 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
INO80P53115 snR45snR45 172 nt0.6□□□□□ -2.31
INO80P53115 SNU56YDR240C 1479 nt0.59□□□□□ -2.31
INO80P53115 YGR042WYGR042W 816 nt0.59□□□□□ -2.32
INO80P53115 YOL160WYOL160W 342 nt0.58□□□□□ -2.32
INO80P53115 YHL042WYHL042W 453 nt0.57□□□□□ -2.32
INO80P53115 RPL26AYLR344W 384 nt0.57□□□□□ -2.32
INO80P53115 RPB10YOR210W 213 nt0.57□□□□□ -2.32
INO80P53115 YJL135WYJL135W 318 nt0.56□□□□□ -2.32
INO80P53115 LOA1YPR139C 903 nt0.56□□□□□ -2.32
INO80P53115 YER135CYER135C 393 nt0.54□□□□□ -2.32
INO80P53115 CUL3YGR003W 2235 nt0.54□□□□□ -2.32
INO80P53115 MLP1YKR095W 5628 nt0.54□□□□□ -2.32
INO80P53115 BFR2YDR299W 1605 nt0.53□□□□□ -2.32
INO80P53115 NPR2YEL062W 1848 nt0.52□□□□□ -2.33
INO80P53115 TIM13YGR181W 318 nt0.52□□□□□ -2.33
INO80P53115 YIR044CYIR044C 186 nt0.52□□□□□ -2.33
INO80P53115 YNL319WYNL319W 441 nt0.52□□□□□ -2.33
INO80P53115 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
INO80P53115 YPL261CYPL261C 309 nt0.51□□□□□ -2.33
INO80P53115 YFL012WYFL012W 447 nt0.5□□□□□ -2.33
INO80P53115 NIP100YPL174C 2607 nt0.5□□□□□ -2.33
INO80P53115 NOP9YJL010C 2001 nt0.5□□□□□ -2.33
INO80P53115 YCR001WYCR001W 315 nt0.49□□□□□ -2.33
INO80P53115 YKL123WYKL123W 381 nt0.49□□□□□ -2.33
INO80P53115 YBL100W-BYBL100W-B 5313 nt0.49□□□□□ -2.33
INO80P53115 PMP1YCR024C-A 123 nt0.48□□□□□ -2.33
INO80P53115 YPL185WYPL185W 396 nt0.48□□□□□ -2.33
INO80P53115 CDC33YOL139C 642 nt0.48□□□□□ -2.33
INO80P53115 RAD34YDR314C 2079 nt0.47□□□□□ -2.33
INO80P53115 YEL030C-AYEL030C-A 315 nt0.47□□□□□ -2.33
INO80P53115 PBI2YNL015W 228 nt0.47□□□□□ -2.33
INO80P53115 CHS6YJL099W 2241 nt0.47□□□□□ -2.33
INO80P53115 YAR053WYAR053W 297 nt0.46□□□□□ -2.34
INO80P53115 YDL011CYDL011C 324 nt0.45□□□□□ -2.34
INO80P53115 GPI15YNL038W 690 nt0.45□□□□□ -2.34
INO80P53115 YBR076C-AYBR076C-A 267 nt0.44□□□□□ -2.34
INO80P53115 snR78snR78 87 nt0.43□□□□□ -2.34
INO80P53115 EAF6YJR082C 342 nt0.43□□□□□ -2.34
INO80P53115 NFU1YKL040C 771 nt0.43□□□□□ -2.34
INO80P53115 YPL044CYPL044C 549 nt0.43□□□□□ -2.34
INO80P53115 snR51snR51 107 nt0.42□□□□□ -2.34
INO80P53115 ESP1YGR098C 4893 nt0.42□□□□□ -2.34
INO80P53115 PTP2YOR208W 2253 nt0.42□□□□□ -2.34
INO80P53115 YBL071CYBL071C 309 nt0.41□□□□□ -2.34
INO80P53115 RPS24BYIL069C 408 nt0.41□□□□□ -2.34
INO80P53115 YLR287CYLR287C 1068 nt0.41□□□□□ -2.34
INO80P53115 YNL058CYNL058C 951 nt0.41□□□□□ -2.34
INO80P53115 RPF1YHR088W 888 nt0.4□□□□□ -2.35
INO80P53115 YML108WYML108W 318 nt0.4□□□□□ -2.35
INO80P53115 YMR141W-AYMR141W-A 225 nt0.4□□□□□ -2.35
INO80P53115 YDR344CYDR344C 444 nt0.39□□□□□ -2.35
INO80P53115 YIL134C-AYIL134C-A 204 nt0.38□□□□□ -2.35
INO80P53115 ABF2YMR072W 552 nt0.38□□□□□ -2.35
INO80P53115 PAA1YDR071C 576 nt0.37□□□□□ -2.35
INO80P53115 YHR130CYHR130C 336 nt0.37□□□□□ -2.35
INO80P53115 YJL020W-AYJL020W-A 258 nt0.37□□□□□ -2.35
INO80P53115 YPL229WYPL229W 621 nt0.37□□□□□ -2.35
INO80P53115 INP2YMR163C 2118 nt0.37□□□□□ -2.35
INO80P53115 RPL26BYGR034W 384 nt0.36□□□□□ -2.35
INO80P53115 PET111YMR257C 2403 nt0.36□□□□□ -2.35
INO80P53115 ZEO1YOL109W 342 nt0.35□□□□□ -2.35
INO80P53115 YLR269CYLR269C 351 nt0.35□□□□□ -2.35
INO80P53115 YAP6YDR259C 1152 nt0.34□□□□□ -2.36
INO80P53115 SDH7YDR511W 402 nt0.34□□□□□ -2.36
INO80P53115 tR(UCU)Q1tR(UCU)Q1 73 nt0.34□□□□□ -2.36
INO80P53115 BSC3YLR465C 309 nt0.34□□□□□ -2.36
INO80P53115 snR72snR72 98 nt0.33□□□□□ -2.36
INO80P53115 OLI1Q0130 231 nt0.33□□□□□ -2.36
INO80P53115 YJL127W-AYJL127W-A 117 nt0.33□□□□□ -2.36
INO80P53115 EMC4YGL231C 573 nt0.32□□□□□ -2.36
INO80P53115 SPO21YOL091W 1830 nt0.31□□□□□ -2.36
INO80P53115 RPS20YHL015W 366 nt0.31□□□□□ -2.36
INO80P53115 YBL008W-AYBL008W-A 240 nt0.31□□□□□ -2.36
INO80P53115 YBR064WYBR064W 429 nt0.31□□□□□ -2.36
INO80P53115 MAM33YIL070C 801 nt0.29□□□□□ -2.36
INO80P53115 FYV10YIL097W 1551 nt0.29□□□□□ -2.36
INO80P53115 COX5BYIL111W 456 nt0.29□□□□□ -2.36
INO80P53115 snR54snR54 86 nt0.29□□□□□ -2.36
INO80P53115 YHR125WYHR125W 306 nt0.28□□□□□ -2.37
INO80P53115 YLR232WYLR232W 348 nt0.28□□□□□ -2.37
INO80P53115 VIK1YPL253C 1944 nt0.27□□□□□ -2.37
INO80P53115 YPL060C-AYPL060C-A 3315 nt0.27□□□□□ -2.37
INO80P53115 SBH1YER087C-B 249 nt0.27□□□□□ -2.37
INO80P53115 DIE2YGR227W 1578 nt0.26□□□□□ -2.37
INO80P53115 YHL041WYHL041W 450 nt0.25□□□□□ -2.37
INO80P53115 ATG31YDR022C 591 nt0.24□□□□□ -2.37
INO80P53115 MCM10YIL150C 1716 nt0.24□□□□□ -2.37
INO80P53115 YGR174W-AYGR174W-A 87 nt0.22□□□□□ -2.37
INO80P53115 YJR011CYJR011C 786 nt0.22□□□□□ -2.37
INO80P53115 YBR206WYBR206W 324 nt0.22□□□□□ -2.37
INO80P53115 TFB5YDR079C-A 219 nt0.21□□□□□ -2.38
INO80P53115 HMRA2YCR096C 360 nt0.19□□□□□ -2.38
INO80P53115 STE18YJR086W 333 nt0.19□□□□□ -2.38
INO80P53115 AIM29YKR074W 468 nt0.19□□□□□ -2.38
INO80P53115 YAL067W-AYAL067W-A 228 nt0.19□□□□□ -2.38
INO80P53115 YLR399W-AYLR399W-A 105 nt0.19□□□□□ -2.38
INO80P53115 YER084W-AYER084W-A 513 nt0.18□□□□□ -2.38
INO80P53115 YKL083WYKL083W 615 nt0.18□□□□□ -2.38
INO80P53115 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
INO80P53115 YML007C-AYML007C-A 111 nt0.17□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 31 ms