Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 TCB2YNL087W 3537 nt2.75□□□□□ -1.97
NUP42P49686 snR45snR45 172 nt2.75□□□□□ -1.97
NUP42P49686 YJR039WYJR039W 3366 nt2.74□□□□□ -1.97
NUP42P49686 YOR161W-AYOR161W-A 81 nt2.74□□□□□ -1.97
NUP42P49686 PAN2YGL094C 3348 nt2.74□□□□□ -1.97
NUP42P49686 SAP1YER047C 2694 nt2.74□□□□□ -1.97
NUP42P49686 MDS3YGL197W 4464 nt2.73□□□□□ -1.97
NUP42P49686 MMS4YBR098W 2076 nt2.73□□□□□ -1.97
NUP42P49686 HIR3YJR140C 4947 nt2.73□□□□□ -1.97
NUP42P49686 COA6YMR244C-A 315 nt2.72□□□□□ -1.97
NUP42P49686 NUT1YGL151W 3399 nt2.72□□□□□ -1.97
NUP42P49686 YML002WYML002W 2214 nt2.72□□□□□ -1.97
NUP42P49686 YPR097WYPR097W 3222 nt2.71□□□□□ -1.98
NUP42P49686 MSH6YDR097C 3729 nt2.71□□□□□ -1.98
NUP42P49686 GYP5YPL249C 2685 nt2.71□□□□□ -1.98
NUP42P49686 YSP2YDR326C 4317 nt2.71□□□□□ -1.98
NUP42P49686 ALY2YJL084C 3141 nt2.7□□□□□ -1.98
NUP42P49686 MSB2YGR014W 3921 nt2.7□□□□□ -1.98
NUP42P49686 RCO1YMR075W 2055 nt2.7□□□□□ -1.98
NUP42P49686 PAU11YGL261C 363 nt2.69□□□□□ -1.98
NUP42P49686 YHR032C-AYHR032C-A 120 nt2.69□□□□□ -1.98
NUP42P49686 SLA1YBL007C 3735 nt2.69□□□□□ -1.98
NUP42P49686 EAF1YDR359C 2949 nt2.69□□□□□ -1.98
NUP42P49686 MYO2YOR326W 4725 nt2.68□□□□□ -1.98
NUP42P49686 INO80YGL150C 4470 nt2.68□□□□□ -1.98
NUP42P49686 ARO1YDR127W 4767 nt2.68□□□□□ -1.98
NUP42P49686 RAD50YNL250W 3939 nt2.67□□□□□ -1.98
NUP42P49686 snR81snR81 201 nt2.67□□□□□ -1.98
NUP42P49686 SNQ2YDR011W 4506 nt2.66□□□□□ -1.98
NUP42P49686 EMC5YIL027C 426 nt2.66□□□□□ -1.98
NUP42P49686 YKL162C-AYKL162C-A 153 nt2.66□□□□□ -1.98
NUP42P49686 KOG1YHR186C 4674 nt2.66□□□□□ -1.98
NUP42P49686 KIP1YBL063W 3336 nt2.66□□□□□ -1.98
NUP42P49686 SLN1YIL147C 3663 nt2.65□□□□□ -1.98
NUP42P49686 YAL037C-AYAL037C-A 93 nt2.65□□□□□ -1.99
NUP42P49686 RPS21AYKR057W 264 nt2.64□□□□□ -1.99
NUP42P49686 MYO4YAL029C 4416 nt2.64□□□□□ -1.99
NUP42P49686 YJL127W-AYJL127W-A 117 nt2.63□□□□□ -1.99
NUP42P49686 LCL1YPL056C 306 nt2.63□□□□□ -1.99
NUP42P49686 RTP1YMR185W 2946 nt2.63□□□□□ -1.99
NUP42P49686 SEC21YNL287W 2808 nt2.62□□□□□ -1.99
NUP42P49686 YLR232WYLR232W 348 nt2.62□□□□□ -1.99
NUP42P49686 YAR009CYAR009C 3591 nt2.61□□□□□ -1.99
NUP42P49686 ESL1YIL151C 3357 nt2.61□□□□□ -1.99
NUP42P49686 SPF1YEL031W 3648 nt2.61□□□□□ -1.99
NUP42P49686 SRB8YCR081W 4284 nt2.6□□□□□ -1.99
NUP42P49686 BNR1YIL159W 4128 nt2.6□□□□□ -1.99
NUP42P49686 SIR4YDR227W 4077 nt2.6□□□□□ -1.99
NUP42P49686 SLH1YGR271W 5904 nt2.6□□□□□ -1.99
NUP42P49686 KAP120YPL125W 3099 nt2.59□□□□□ -1.99
NUP42P49686 ESC1YMR219W 4977 nt2.59□□□□□ -2
NUP42P49686 NUM1YDR150W 8247 nt2.59□□□□□ -2
NUP42P49686 snR62snR62 100 nt2.58□□□□□ -2
NUP42P49686 IES6YEL044W 501 nt2.58□□□□□ -2
NUP42P49686 YNL266WYNL266W 420 nt2.58□□□□□ -2
NUP42P49686 BIR1YJR089W 2865 nt2.58□□□□□ -2
NUP42P49686 MOT1YPL082C 5604 nt2.57□□□□□ -2
NUP42P49686 PNC1YGL037C 651 nt2.57□□□□□ -2
NUP42P49686 REC8YPR007C 2043 nt2.57□□□□□ -2
NUP42P49686 SVL3YPL032C 2478 nt2.56□□□□□ -2
NUP42P49686 SUP56tL(CAA)A 82 nt2.55□□□□□ -2
NUP42P49686 SUP53tL(CAA)C 82 nt2.55□□□□□ -2
NUP42P49686 tL(CAA)DtL(CAA)D 82 nt2.55□□□□□ -2
NUP42P49686 tL(CAA)G1tL(CAA)G1 82 nt2.55□□□□□ -2
NUP42P49686 SUP54tL(CAA)G2 82 nt2.55□□□□□ -2
NUP42P49686 tL(CAA)G3tL(CAA)G3 82 nt2.55□□□□□ -2
NUP42P49686 tL(CAA)KtL(CAA)K 82 nt2.55□□□□□ -2
NUP42P49686 tL(CAA)LtL(CAA)L 82 nt2.55□□□□□ -2
NUP42P49686 tL(CAA)MtL(CAA)M 82 nt2.55□□□□□ -2
NUP42P49686 tL(CAA)NtL(CAA)N 82 nt2.55□□□□□ -2
NUP42P49686 FYV10YIL097W 1551 nt2.55□□□□□ -2
NUP42P49686 YJL052C-AYJL052C-A 120 nt2.55□□□□□ -2
NUP42P49686 YLR041WYLR041W 321 nt2.55□□□□□ -2
NUP42P49686 YBR072C-AYBR072C-A 162 nt2.55□□□□□ -2
NUP42P49686 UFD4YKL010C 4452 nt2.54□□□□□ -2
NUP42P49686 YDR210WYDR210W 228 nt2.54□□□□□ -2
NUP42P49686 YGR146C-AYGR146C-A 162 nt2.54□□□□□ -2
NUP42P49686 SLX4YLR135W 2247 nt2.54□□□□□ -2
NUP42P49686 ROM2YLR371W 4071 nt2.53□□□□□ -2
NUP42P49686 PDR3YBL005W 2931 nt2.53□□□□□ -2
NUP42P49686 SEC1YDR164C 2175 nt2.53□□□□□ -2
NUP42P49686 CHS1YNL192W 3396 nt2.52□□□□□ -2.01
NUP42P49686 NOP9YJL010C 2001 nt2.51□□□□□ -2.01
NUP42P49686 RPM2YML091C 3609 nt2.51□□□□□ -2.01
NUP42P49686 TOR1YJR066W 7413 nt2.51□□□□□ -2.01
NUP42P49686 COX19YLL018C-A 297 nt2.5□□□□□ -2.01
NUP42P49686 COG6YNL041C 2520 nt2.49□□□□□ -2.01
NUP42P49686 RPL26BYGR034W 384 nt2.49□□□□□ -2.01
NUP42P49686 YLR422WYLR422W 5799 nt2.48□□□□□ -2.01
NUP42P49686 snR190snR190 190 nt2.47□□□□□ -2.01
NUP42P49686 SEC7YDR170C 6030 nt2.46□□□□□ -2.02
NUP42P49686 SMC4YLR086W 4257 nt2.45□□□□□ -2.02
NUP42P49686 ATG9YDL149W 2994 nt2.45□□□□□ -2.02
NUP42P49686 MGA2YIR033W 3342 nt2.45□□□□□ -2.02
NUP42P49686 YOL083C-AYOL083C-A 141 nt2.44□□□□□ -2.02
NUP42P49686 SEC31YDL195W 3822 nt2.44□□□□□ -2.02
NUP42P49686 YCS4YLR272C 3531 nt2.43□□□□□ -2.02
NUP42P49686 PDR8YLR266C 2106 nt2.43□□□□□ -2.02
NUP42P49686 RAD9YDR217C 3930 nt2.43□□□□□ -2.02
NUP42P49686 SKI3YPR189W 4299 nt2.42□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 118.5 ms