Protein–RNA interactions for Protein: P47057

SNX4, Sorting nexin-4, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNX4P47057 YBL008W-AYBL008W-A 240 nt0.72□□□□□ -2.29
SNX4P47057 YDL206WYDL206W 2289 nt0.72□□□□□ -2.29
SNX4P47057 ATG31YDR022C 591 nt0.71□□□□□ -2.3
SNX4P47057 RPS20YHL015W 366 nt0.71□□□□□ -2.3
SNX4P47057 PKH2YOL100W 3246 nt0.71□□□□□ -2.3
SNX4P47057 YAR009CYAR009C 3591 nt0.71□□□□□ -2.3
SNX4P47057 GPG1YGL121C 381 nt0.7□□□□□ -2.3
SNX4P47057 PAM16YJL104W 450 nt0.7□□□□□ -2.3
SNX4P47057 YBR285WYBR285W 435 nt0.7□□□□□ -2.3
SNX4P47057 WAR1YML076C 2835 nt0.7□□□□□ -2.3
SNX4P47057 PAN2YGL094C 3348 nt0.69□□□□□ -2.3
SNX4P47057 YMR031W-AYMR031W-A 327 nt0.69□□□□□ -2.3
SNX4P47057 NIP100YPL174C 2607 nt0.68□□□□□ -2.3
SNX4P47057 MAM33YIL070C 801 nt0.68□□□□□ -2.3
SNX4P47057 YML007C-AYML007C-A 111 nt0.68□□□□□ -2.3
SNX4P47057 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
SNX4P47057 YOR072W-AYOR072W-A 249 nt0.68□□□□□ -2.3
SNX4P47057 YPR002C-AYPR002C-A 198 nt0.68□□□□□ -2.3
SNX4P47057 RIM20YOR275C 1986 nt0.68□□□□□ -2.3
SNX4P47057 YDL196WYDL196W 330 nt0.67□□□□□ -2.3
SNX4P47057 YHR138CYHR138C 345 nt0.67□□□□□ -2.3
SNX4P47057 YJR011CYJR011C 786 nt0.67□□□□□ -2.3
SNX4P47057 RPL38YLR325C 237 nt0.67□□□□□ -2.3
SNX4P47057 BSC3YLR465C 309 nt0.67□□□□□ -2.3
SNX4P47057 YPR159C-AYPR159C-A 102 nt0.67□□□□□ -2.3
SNX4P47057 SEC1YDR164C 2175 nt0.67□□□□□ -2.3
SNX4P47057 YDR426CYDR426C 378 nt0.66□□□□□ -2.3
SNX4P47057 YER137W-AYER137W-A 306 nt0.66□□□□□ -2.3
SNX4P47057 YLR222C-AYLR222C-A 231 nt0.66□□□□□ -2.3
SNX4P47057 LEE1YPL054W 906 nt0.66□□□□□ -2.3
SNX4P47057 CUL3YGR003W 2235 nt0.66□□□□□ -2.3
SNX4P47057 PRP16YKR086W 3216 nt0.66□□□□□ -2.3
SNX4P47057 GEA2YEL022W 4380 nt0.66□□□□□ -2.3
SNX4P47057 RKR1YMR247C 4689 nt0.65□□□□□ -2.31
SNX4P47057 YIR044CYIR044C 186 nt0.65□□□□□ -2.31
SNX4P47057 YOR053WYOR053W 342 nt0.65□□□□□ -2.31
SNX4P47057 YHL042WYHL042W 453 nt0.64□□□□□ -2.31
SNX4P47057 YMR001C-AYMR001C-A 231 nt0.64□□□□□ -2.31
SNX4P47057 YDL073WYDL073W 2955 nt0.63□□□□□ -2.31
SNX4P47057 YLL007CYLL007C 1998 nt0.63□□□□□ -2.31
SNX4P47057 NHP2YDL208W 471 nt0.63□□□□□ -2.31
SNX4P47057 CSN9YDR179C 489 nt0.63□□□□□ -2.31
SNX4P47057 YDR521WYDR521W 336 nt0.63□□□□□ -2.31
SNX4P47057 YOR121CYOR121C 306 nt0.63□□□□□ -2.31
SNX4P47057 RPS30BYOR182C 192 nt0.63□□□□□ -2.31
SNX4P47057 YOR293C-AYOR293C-A 150 nt0.63□□□□□ -2.31
SNX4P47057 YBR064WYBR064W 429 nt0.63□□□□□ -2.31
SNX4P47057 YBR206WYBR206W 324 nt0.63□□□□□ -2.31
SNX4P47057 PCC1YKR095W-A 267 nt0.61□□□□□ -2.31
SNX4P47057 ALG13YGL047W 609 nt0.6□□□□□ -2.31
SNX4P47057 VAR1Q0140 1197 nt0.6□□□□□ -2.31
SNX4P47057 YAL068W-AYAL068W-A 255 nt0.6□□□□□ -2.31
SNX4P47057 YLR154W-FYLR154W-F 141 nt0.6□□□□□ -2.31
SNX4P47057 IES4YOR189W 351 nt0.6□□□□□ -2.31
SNX4P47057 DBP6YNR038W 1890 nt0.6□□□□□ -2.31
SNX4P47057 BFR2YDR299W 1605 nt0.6□□□□□ -2.31
SNX4P47057 PTP2YOR208W 2253 nt0.59□□□□□ -2.31
SNX4P47057 ISD11YER048W-A 285 nt0.59□□□□□ -2.31
SNX4P47057 INA22YIR024C 651 nt0.59□□□□□ -2.31
SNX4P47057 UTP20YBL004W 7482 nt0.59□□□□□ -2.32
SNX4P47057 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
SNX4P47057 YDR344CYDR344C 444 nt0.58□□□□□ -2.32
SNX4P47057 YAR053WYAR053W 297 nt0.58□□□□□ -2.32
SNX4P47057 YML002WYML002W 2214 nt0.58□□□□□ -2.32
SNX4P47057 MCM10YIL150C 1716 nt0.58□□□□□ -2.32
SNX4P47057 tW(UCA)QtW(UCA)Q 74 nt0.57□□□□□ -2.32
SNX4P47057 CMC4YMR194C-B 222 nt0.57□□□□□ -2.32
SNX4P47057 YCK3YER123W 1575 nt0.57□□□□□ -2.32
SNX4P47057 OLI1Q0130 231 nt0.56□□□□□ -2.32
SNX4P47057 YIL142C-AYIL142C-A 333 nt0.56□□□□□ -2.32
SNX4P47057 YLR334CYLR334C 381 nt0.56□□□□□ -2.32
SNX4P47057 YOR282WYOR282W 321 nt0.56□□□□□ -2.32
SNX4P47057 OST1YJL002C 1431 nt0.55□□□□□ -2.32
SNX4P47057 ECM12YHR021W-A 456 nt0.55□□□□□ -2.32
SNX4P47057 YAR029WYAR029W 225 nt0.55□□□□□ -2.32
SNX4P47057 NOP9YJL010C 2001 nt0.55□□□□□ -2.32
SNX4P47057 PMP1YCR024C-A 123 nt0.54□□□□□ -2.32
SNX4P47057 RPL35AYDL191W 363 nt0.54□□□□□ -2.32
SNX4P47057 tF(GAA)BtF(GAA)B 73 nt0.54□□□□□ -2.32
SNX4P47057 tF(GAA)FtF(GAA)F 73 nt0.54□□□□□ -2.32
SNX4P47057 tF(GAA)GtF(GAA)G 73 nt0.54□□□□□ -2.32
SNX4P47057 tF(GAA)H1tF(GAA)H1 73 nt0.54□□□□□ -2.32
SNX4P47057 tF(GAA)H2tF(GAA)H2 73 nt0.54□□□□□ -2.32
SNX4P47057 tF(GAA)MtF(GAA)M 73 nt0.54□□□□□ -2.32
SNX4P47057 tF(GAA)P1tF(GAA)P1 73 nt0.54□□□□□ -2.32
SNX4P47057 tF(GAA)P2tF(GAA)P2 73 nt0.54□□□□□ -2.32
SNX4P47057 HTB2YBL002W 396 nt0.53□□□□□ -2.32
SNX4P47057 YOR011W-AYOR011W-A 207 nt0.53□□□□□ -2.32
SNX4P47057 YPL044CYPL044C 549 nt0.53□□□□□ -2.32
SNX4P47057 YMR160WYMR160W 2451 nt0.53□□□□□ -2.33
SNX4P47057 HMRA2YCR096C 360 nt0.52□□□□□ -2.33
SNX4P47057 YDR157WYDR157W 402 nt0.52□□□□□ -2.33
SNX4P47057 YHR063W-AYHR063W-A 336 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)BtT(AGU)B 73 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)CtT(AGU)C 73 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)DtT(AGU)D 73 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)HtT(AGU)H 73 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)I1tT(AGU)I1 73 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)I2tT(AGU)I2 73 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)JtT(AGU)J 73 nt0.51□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms