Protein–RNA interactions for Protein: P40045

TDA2, Topoisomerase I damage affected protein 2, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA2P40045 YOR248WYOR248W 303 nt-0.46□□□□□ -2.48
TDA2P40045 HAL9YOL089C 3093 nt-0.46□□□□□ -2.48
TDA2P40045 NNF2YGR089W 2811 nt-0.47□□□□□ -2.48
TDA2P40045 TFB5YDR079C-A 219 nt-0.47□□□□□ -2.48
TDA2P40045 ILM1YJR118C 612 nt-0.47□□□□□ -2.48
TDA2P40045 YOL160WYOL160W 342 nt-0.47□□□□□ -2.48
TDA2P40045 RAD34YDR314C 2079 nt-0.48□□□□□ -2.49
TDA2P40045 YKL068W-AYKL068W-A 237 nt-0.48□□□□□ -2.49
TDA2P40045 ECM9YKR004C 1134 nt-0.48□□□□□ -2.49
TDA2P40045 YLR399W-AYLR399W-A 105 nt-0.48□□□□□ -2.49
TDA2P40045 YOR345CYOR345C 351 nt-0.48□□□□□ -2.49
TDA2P40045 SNU56YDR240C 1479 nt-0.48□□□□□ -2.49
TDA2P40045 snR5snR5 204 nt-0.49□□□□□ -2.49
TDA2P40045 CUP1-1YHR053C 186 nt-0.49□□□□□ -2.49
TDA2P40045 CUP1-2YHR055C 186 nt-0.49□□□□□ -2.49
TDA2P40045 snR128snR128 126 nt-0.49□□□□□ -2.49
TDA2P40045 YKU70YMR284W 1809 nt-0.5□□□□□ -2.49
TDA2P40045 SPO21YOL091W 1830 nt-0.5□□□□□ -2.49
TDA2P40045 COY1YKL179C 2040 nt-0.5□□□□□ -2.49
TDA2P40045 YKL023C-AYKL023C-A 228 nt-0.5□□□□□ -2.49
TDA2P40045 BUD26YDR241W 288 nt-0.51□□□□□ -2.49
TDA2P40045 SBH2YER019C-A 267 nt-0.51□□□□□ -2.49
TDA2P40045 PBI2YNL015W 228 nt-0.51□□□□□ -2.49
TDA2P40045 snR72snR72 98 nt-0.52□□□□□ -2.49
TDA2P40045 EMC4YGL231C 573 nt-0.52□□□□□ -2.49
TDA2P40045 YGR228WYGR228W 345 nt-0.52□□□□□ -2.49
TDA2P40045 YBR206WYBR206W 324 nt-0.52□□□□□ -2.49
TDA2P40045 NIP1YMR309C 2439 nt-0.53□□□□□ -2.49
TDA2P40045 YGL239CYGL239C 315 nt-0.53□□□□□ -2.49
TDA2P40045 YGR164WYGR164W 336 nt-0.53□□□□□ -2.49
TDA2P40045 CMC1YKL137W 336 nt-0.53□□□□□ -2.49
TDA2P40045 YPL261CYPL261C 309 nt-0.54□□□□□ -2.5
TDA2P40045 YIR044CYIR044C 186 nt-0.55□□□□□ -2.5
TDA2P40045 YML108WYML108W 318 nt-0.55□□□□□ -2.5
TDA2P40045 YBL062WYBL062W 381 nt-0.55□□□□□ -2.5
TDA2P40045 YPR039WYPR039W 336 nt-0.56□□□□□ -2.5
TDA2P40045 RAD61YDR014W 1944 nt-0.56□□□□□ -2.5
TDA2P40045 YEL073CYEL073C 324 nt-0.57□□□□□ -2.5
TDA2P40045 YBL107W-AYBL107W-A 105 nt-0.57□□□□□ -2.5
TDA2P40045 DCP1YOL149W 696 nt-0.57□□□□□ -2.5
TDA2P40045 YHL046W-AYHL046W-A 327 nt-0.58□□□□□ -2.5
TDA2P40045 YLR101CYLR101C 396 nt-0.58□□□□□ -2.5
TDA2P40045 MRPL32YCR003W 552 nt-0.59□□□□□ -2.5
TDA2P40045 tN(GUU)QtN(GUU)Q 71 nt-0.59□□□□□ -2.5
TDA2P40045 QCR9YGR183C 201 nt-0.59□□□□□ -2.5
TDA2P40045 YJR011CYJR011C 786 nt-0.59□□□□□ -2.5
TDA2P40045 YLR171WYLR171W 390 nt-0.59□□□□□ -2.5
TDA2P40045 YBR063CYBR063C 1215 nt-0.59□□□□□ -2.5
TDA2P40045 UBS1YBR165W 834 nt-0.59□□□□□ -2.5
TDA2P40045 SEC10YLR166C 2616 nt-0.6□□□□□ -2.51
TDA2P40045 YKL202WYKL202W 582 nt-0.6□□□□□ -2.51
TDA2P40045 snR46snR46 197 nt-0.6□□□□□ -2.51
TDA2P40045 YJR141WYJR141W 1044 nt-0.61□□□□□ -2.51
TDA2P40045 YER135CYER135C 393 nt-0.62□□□□□ -2.51
TDA2P40045 APQ13YJL075C 417 nt-0.62□□□□□ -2.51
TDA2P40045 PTP2YOR208W 2253 nt-0.62□□□□□ -2.51
TDA2P40045 PRP39YML046W 1890 nt-0.63□□□□□ -2.51
TDA2P40045 YHR131W-AYHR131W-A 246 nt-0.64□□□□□ -2.51
TDA2P40045 YIL066W-AYIL066W-A 444 nt-0.64□□□□□ -2.51
TDA2P40045 YOL029CYOL029C 606 nt-0.64□□□□□ -2.51
TDA2P40045 snR51snR51 107 nt-0.64□□□□□ -2.51
TDA2P40045 BUL2YML111W 2763 nt-0.65□□□□□ -2.51
TDA2P40045 YGR115CYGR115C 780 nt-0.65□□□□□ -2.51
TDA2P40045 YJL007CYJL007C 315 nt-0.65□□□□□ -2.51
TDA2P40045 snR9snR9 187 nt-0.66□□□□□ -2.52
TDA2P40045 YMR254CYMR254C 309 nt-0.66□□□□□ -2.52
TDA2P40045 CSE1YGL238W 2883 nt-0.67□□□□□ -2.52
TDA2P40045 HTB2YBL002W 396 nt-0.67□□□□□ -2.52
TDA2P40045 POP7YBR167C 423 nt-0.67□□□□□ -2.52
TDA2P40045 HUR1YGL168W 333 nt-0.68□□□□□ -2.52
TDA2P40045 SCEIQ0160 708 nt-0.68□□□□□ -2.52
TDA2P40045 YLL006W-AYLL006W-A 177 nt-0.68□□□□□ -2.52
TDA2P40045 YOR032W-AYOR032W-A 201 nt-0.68□□□□□ -2.52
TDA2P40045 IPP1YBR011C 864 nt-0.69□□□□□ -2.52
TDA2P40045 YDL185C-AYDL185C-A 228 nt-0.7□□□□□ -2.52
TDA2P40045 YCR001WYCR001W 315 nt-0.71□□□□□ -2.52
TDA2P40045 RPS20YHL015W 366 nt-0.71□□□□□ -2.52
TDA2P40045 NIP100YPL174C 2607 nt-0.71□□□□□ -2.52
TDA2P40045 SDH7YDR511W 402 nt-0.72□□□□□ -2.52
TDA2P40045 YIR030W-AYIR030W-A 384 nt-0.72□□□□□ -2.52
TDA2P40045 YPL182CYPL182C 384 nt-0.72□□□□□ -2.52
TDA2P40045 YCR018C-AYCR018C-A 255 nt-0.73□□□□□ -2.53
TDA2P40045 YPT6YLR262C 648 nt-0.73□□□□□ -2.53
TDA2P40045 YLR412C-AYLR412C-A 207 nt-0.73□□□□□ -2.53
TDA2P40045 ATG31YDR022C 591 nt-0.74□□□□□ -2.53
TDA2P40045 SEM1YDR363W-A 270 nt-0.74□□□□□ -2.53
TDA2P40045 ECL1YGR146C 636 nt-0.74□□□□□ -2.53
TDA2P40045 TIM13YGR181W 318 nt-0.74□□□□□ -2.53
TDA2P40045 YPL225WYPL225W 441 nt-0.74□□□□□ -2.53
TDA2P40045 YGR025WYGR025W 303 nt-0.75□□□□□ -2.53
TDA2P40045 YMR307C-AYMR307C-A 195 nt-0.75□□□□□ -2.53
TDA2P40045 YOR011W-AYOR011W-A 207 nt-0.75□□□□□ -2.53
TDA2P40045 YPL205CYPL205C 345 nt-0.75□□□□□ -2.53
TDA2P40045 YIR021W-AYIR021W-A 213 nt-0.76□□□□□ -2.53
TDA2P40045 YNL319WYNL319W 441 nt-0.76□□□□□ -2.53
TDA2P40045 SGF11YPL047W 300 nt-0.76□□□□□ -2.53
TDA2P40045 DIE2YGR227W 1578 nt-0.77□□□□□ -2.53
TDA2P40045 MND1YGL183C 660 nt-0.77□□□□□ -2.53
TDA2P40045 YPR170W-AYPR170W-A 186 nt-0.77□□□□□ -2.53
TDA2P40045 BER1YLR412W 825 nt-0.78□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 22.1 ms