Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 UTP21YLR409C 2820 nt2.18□□□□□ -2.06
RSP5P39940 HSL1YKL101W 4557 nt2.17□□□□□ -2.06
RSP5P39940 UBP15YMR304W 3693 nt2.17□□□□□ -2.06
RSP5P39940 YOR376WYOR376W 369 nt2.17□□□□□ -2.06
RSP5P39940 YPR092WYPR092W 306 nt2.17□□□□□ -2.06
RSP5P39940 NOC3YLR002C 1992 nt2.17□□□□□ -2.06
RSP5P39940 PTP2YOR208W 2253 nt2.17□□□□□ -2.06
RSP5P39940 RGA1YOR127W 3024 nt2.16□□□□□ -2.06
RSP5P39940 TFC3YAL001C 3483 nt2.16□□□□□ -2.06
RSP5P39940 YOR381W-AYOR381W-A 168 nt2.16□□□□□ -2.06
RSP5P39940 YLR035C-AYLR035C-A 3468 nt2.15□□□□□ -2.06
RSP5P39940 SAP190YKR028W 3102 nt2.15□□□□□ -2.07
RSP5P39940 RPS25BYLR333C 327 nt2.15□□□□□ -2.07
RSP5P39940 YBR131C-AYBR131C-A 90 nt2.15□□□□□ -2.07
RSP5P39940 YJL120WYJL120W 324 nt2.14□□□□□ -2.07
RSP5P39940 YMR175W-AYMR175W-A 195 nt2.14□□□□□ -2.07
RSP5P39940 YOR329W-AYOR329W-A 210 nt2.14□□□□□ -2.07
RSP5P39940 YBR182C-AYBR182C-A 195 nt2.14□□□□□ -2.07
RSP5P39940 ELG1YOR144C 2376 nt2.13□□□□□ -2.07
RSP5P39940 snR74snR74 88 nt2.13□□□□□ -2.07
RSP5P39940 YIR030W-AYIR030W-A 384 nt2.13□□□□□ -2.07
RSP5P39940 snR52snR52 92 nt2.13□□□□□ -2.07
RSP5P39940 MCM10YIL150C 1716 nt2.13□□□□□ -2.07
RSP5P39940 YJR039WYJR039W 3366 nt2.12□□□□□ -2.07
RSP5P39940 YMR045CYMR045C 5268 nt2.12□□□□□ -2.07
RSP5P39940 SEC5YDR166C 2916 nt2.12□□□□□ -2.07
RSP5P39940 SPO21YOL091W 1830 nt2.12□□□□□ -2.07
RSP5P39940 SLI15YBR156C 2097 nt2.11□□□□□ -2.07
RSP5P39940 UBP2YOR124C 3819 nt2.11□□□□□ -2.07
RSP5P39940 YLL007CYLL007C 1998 nt2.11□□□□□ -2.07
RSP5P39940 YJL052C-AYJL052C-A 120 nt2.11□□□□□ -2.07
RSP5P39940 PAU3YCR104W 375 nt2.1□□□□□ -2.07
RSP5P39940 YOR161W-BYOR161W-B 261 nt2.1□□□□□ -2.07
RSP5P39940 YBR174CYBR174C 315 nt2.1□□□□□ -2.07
RSP5P39940 EMC5YIL027C 426 nt2.09□□□□□ -2.07
RSP5P39940 TMA7YLR262C-A 195 nt2.09□□□□□ -2.07
RSP5P39940 DGR1YNL130C-A 147 nt2.09□□□□□ -2.07
RSP5P39940 PRP42YDR235W 1635 nt2.09□□□□□ -2.08
RSP5P39940 LHS1YKL073W 2646 nt2.08□□□□□ -2.08
RSP5P39940 snR70snR70 164 nt2.08□□□□□ -2.08
RSP5P39940 RPL31AYDL075W 342 nt2.08□□□□□ -2.08
RSP5P39940 APL5YPL195W 2799 nt2.07□□□□□ -2.08
RSP5P39940 SGF11YPL047W 300 nt2.07□□□□□ -2.08
RSP5P39940 SPO24YPR036W-A 204 nt2.07□□□□□ -2.08
RSP5P39940 COG4YPR105C 2586 nt2.06□□□□□ -2.08
RSP5P39940 SAC3YDR159W 3906 nt2.06□□□□□ -2.08
RSP5P39940 SPP41YDR464W 4308 nt2.06□□□□□ -2.08
RSP5P39940 YHR210CYHR210C 1026 nt2.06□□□□□ -2.08
RSP5P39940 YIL071W-AYIL071W-A 477 nt2.06□□□□□ -2.08
RSP5P39940 NEO1YIL048W 3456 nt2.06□□□□□ -2.08
RSP5P39940 UTP22YGR090W 3714 nt2.06□□□□□ -2.08
RSP5P39940 ALK1YGL021W 2283 nt2.06□□□□□ -2.08
RSP5P39940 PBY1YBR094W 2262 nt2.06□□□□□ -2.08
RSP5P39940 NUT1YGL151W 3399 nt2.06□□□□□ -2.08
RSP5P39940 BRE1YDL074C 2103 nt2.05□□□□□ -2.08
RSP5P39940 PKH2YOL100W 3246 nt2.05□□□□□ -2.08
RSP5P39940 TOR2YKL203C 7425 nt2.05□□□□□ -2.08
RSP5P39940 GCN2YDR283C 4980 nt2.04□□□□□ -2.08
RSP5P39940 TRM3YDL112W 4311 nt2.04□□□□□ -2.08
RSP5P39940 YOR072W-BYOR072W-B 162 nt2.04□□□□□ -2.08
RSP5P39940 SKI3YPR189W 4299 nt2.03□□□□□ -2.08
RSP5P39940 IFH1YLR223C 3258 nt2.03□□□□□ -2.08
RSP5P39940 PMP1YCR024C-A 123 nt2.03□□□□□ -2.08
RSP5P39940 YDR521WYDR521W 336 nt2.03□□□□□ -2.08
RSP5P39940 YDR544CYDR544C 429 nt2.03□□□□□ -2.08
RSP5P39940 SNU13YEL026W 381 nt2.03□□□□□ -2.08
RSP5P39940 NUP170YBL079W 4509 nt2.03□□□□□ -2.08
RSP5P39940 TBS1YBR150C 3285 nt2.03□□□□□ -2.08
RSP5P39940 ULI1YFR026C 510 nt2.01□□□□□ -2.09
RSP5P39940 ECM12YHR021W-A 456 nt2.01□□□□□ -2.09
RSP5P39940 PIP2YOR363C 2991 nt2.01□□□□□ -2.09
RSP5P39940 RAD50YNL250W 3939 nt2□□□□□ -2.09
RSP5P39940 ADR1YDR216W 3972 nt2□□□□□ -2.09
RSP5P39940 KIP1YBL063W 3336 nt1.99□□□□□ -2.09
RSP5P39940 YCS4YLR272C 3531 nt1.99□□□□□ -2.09
RSP5P39940 UFD2YDL190C 2886 nt1.99□□□□□ -2.09
RSP5P39940 UBR2YLR024C 5619 nt1.99□□□□□ -2.09
RSP5P39940 RPL33BYOR234C 324 nt1.99□□□□□ -2.09
RSP5P39940 KCS1YDR017C 3153 nt1.99□□□□□ -2.09
RSP5P39940 TFB5YDR079C-A 219 nt1.98□□□□□ -2.09
RSP5P39940 YEL073CYEL073C 324 nt1.98□□□□□ -2.09
RSP5P39940 ALY2YJL084C 3141 nt1.97□□□□□ -2.09
RSP5P39940 CTF4YPR135W 2784 nt1.97□□□□□ -2.09
RSP5P39940 YMR326CYMR326C 309 nt1.97□□□□□ -2.09
RSP5P39940 YOR345CYOR345C 351 nt1.97□□□□□ -2.09
RSP5P39940 YLL054CYLL054C 2532 nt1.96□□□□□ -2.1
RSP5P39940 FKS1YLR342W 5631 nt1.96□□□□□ -2.1
RSP5P39940 AIM44YPL158C 2277 nt1.96□□□□□ -2.1
RSP5P39940 YCL001W-BYCL001W-B 255 nt1.95□□□□□ -2.1
RSP5P39940 SLD3YGL113W 2007 nt1.95□□□□□ -2.1
RSP5P39940 YHR217CYHR217C 462 nt1.94□□□□□ -2.1
RSP5P39940 COY1YKL179C 2040 nt1.94□□□□□ -2.1
RSP5P39940 YPP1YGR198W 2454 nt1.94□□□□□ -2.1
RSP5P39940 NCA2YPR155C 1851 nt1.93□□□□□ -2.1
RSP5P39940 YER172C-AYER172C-A 381 nt1.93□□□□□ -2.1
RSP5P39940 YBR206WYBR206W 324 nt1.93□□□□□ -2.1
RSP5P39940 MMS4YBR098W 2076 nt1.93□□□□□ -2.1
RSP5P39940 PAN2YGL094C 3348 nt1.92□□□□□ -2.1
RSP5P39940 YDL206WYDL206W 2289 nt1.92□□□□□ -2.1
RSP5P39940 FAB1YFR019W 6837 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 58.9 ms