Protein–RNA interactions for Protein: P38904

SPP41, Protein SPP41, yeastyeast

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPP41P38904 MAM33YIL070C 801 nt-0.6□□□□□ -2.51
SPP41P38904 YMR141W-AYMR141W-A 225 nt-0.6□□□□□ -2.51
SPP41P38904 snR34snR34 203 nt-0.6□□□□□ -2.51
SPP41P38904 LIN1YHR156C 1023 nt-0.61□□□□□ -2.51
SPP41P38904 NFU1YKL040C 771 nt-0.61□□□□□ -2.51
SPP41P38904 YNL146WYNL146W 303 nt-0.61□□□□□ -2.51
SPP41P38904 RSM23YGL129C 1353 nt-0.61□□□□□ -2.51
SPP41P38904 OLI1Q0130 231 nt-0.62□□□□□ -2.51
SPP41P38904 YIR030W-AYIR030W-A 384 nt-0.62□□□□□ -2.51
SPP41P38904 ECM9YKR004C 1134 nt-0.62□□□□□ -2.51
SPP41P38904 YLR399W-AYLR399W-A 105 nt-0.63□□□□□ -2.51
SPP41P38904 YKU70YMR284W 1809 nt-0.63□□□□□ -2.51
SPP41P38904 SRB7YDR308C 423 nt-0.64□□□□□ -2.51
SPP41P38904 YEL073CYEL073C 324 nt-0.64□□□□□ -2.51
SPP41P38904 YLR101CYLR101C 396 nt-0.64□□□□□ -2.51
SPP41P38904 RRI2YOL117W 1938 nt-0.64□□□□□ -2.51
SPP41P38904 YDR269CYDR269C 324 nt-0.64□□□□□ -2.51
SPP41P38904 TIM13YGR181W 318 nt-0.64□□□□□ -2.51
SPP41P38904 YJR011CYJR011C 786 nt-0.64□□□□□ -2.51
SPP41P38904 PAA1YDR071C 576 nt-0.65□□□□□ -2.51
SPP41P38904 LOC1YFR001W 615 nt-0.65□□□□□ -2.51
SPP41P38904 snR128snR128 126 nt-0.65□□□□□ -2.51
SPP41P38904 YCR038W-AYCR038W-A 126 nt-0.66□□□□□ -2.52
SPP41P38904 NIP1YMR309C 2439 nt-0.67□□□□□ -2.52
SPP41P38904 COY1YKL179C 2040 nt-0.67□□□□□ -2.52
SPP41P38904 YAP6YDR259C 1152 nt-0.67□□□□□ -2.52
SPP41P38904 YER188C-AYER188C-A 300 nt-0.67□□□□□ -2.52
SPP41P38904 POL32YJR043C 1053 nt-0.68□□□□□ -2.52
SPP41P38904 YLR198CYLR198C 360 nt-0.68□□□□□ -2.52
SPP41P38904 YOL160WYOL160W 342 nt-0.68□□□□□ -2.52
SPP41P38904 HTB1YDR224C 396 nt-0.69□□□□□ -2.52
SPP41P38904 RPL22BYFL034C-A 369 nt-0.69□□□□□ -2.52
SPP41P38904 YFR012W-AYFR012W-A 87 nt-0.7□□□□□ -2.52
SPP41P38904 YOR248WYOR248W 303 nt-0.7□□□□□ -2.52
SPP41P38904 YOR345CYOR345C 351 nt-0.71□□□□□ -2.52
SPP41P38904 SNU56YDR240C 1479 nt-0.71□□□□□ -2.52
SPP41P38904 CWC23YGL128C 852 nt-0.72□□□□□ -2.52
SPP41P38904 YKL068W-AYKL068W-A 237 nt-0.72□□□□□ -2.52
SPP41P38904 RPM2YML091C 3609 nt-0.72□□□□□ -2.52
SPP41P38904 YKL023C-AYKL023C-A 228 nt-0.72□□□□□ -2.53
SPP41P38904 YNL146C-AYNL146C-A 195 nt-0.72□□□□□ -2.53
SPP41P38904 YMR013C-AYMR013C-A 150 nt-0.73□□□□□ -2.53
SPP41P38904 PBI2YNL015W 228 nt-0.73□□□□□ -2.53
SPP41P38904 YBL008W-AYBL008W-A 240 nt-0.75□□□□□ -2.53
SPP41P38904 YMR075C-AYMR075C-A 366 nt-0.75□□□□□ -2.53
SPP41P38904 YPL261CYPL261C 309 nt-0.75□□□□□ -2.53
SPP41P38904 SPO21YOL091W 1830 nt-0.76□□□□□ -2.53
SPP41P38904 YIR044CYIR044C 186 nt-0.76□□□□□ -2.53
SPP41P38904 YCR022CYCR022C 345 nt-0.77□□□□□ -2.53
SPP41P38904 YDR220CYDR220C 294 nt-0.78□□□□□ -2.53
SPP41P38904 YGR270C-AYGR270C-A 219 nt-0.78□□□□□ -2.53
SPP41P38904 YHL046W-AYHL046W-A 327 nt-0.78□□□□□ -2.53
SPP41P38904 UBS1YBR165W 834 nt-0.79□□□□□ -2.54
SPP41P38904 IRC16YPR038W 360 nt-0.81□□□□□ -2.54
SPP41P38904 VAM3YOR106W 852 nt-0.81□□□□□ -2.54
SPP41P38904 tT(UGU)G1tT(UGU)G1 72 nt-0.82□□□□□ -2.54
SPP41P38904 tT(UGU)G2tT(UGU)G2 72 nt-0.82□□□□□ -2.54
SPP41P38904 tT(UGU)PtT(UGU)P 72 nt-0.82□□□□□ -2.54
SPP41P38904 HTB2YBL002W 396 nt-0.82□□□□□ -2.54
SPP41P38904 YML108WYML108W 318 nt-0.84□□□□□ -2.54
SPP41P38904 YHL009W-BYHL009W-B 5409 nt-0.84□□□□□ -2.54
SPP41P38904 COG6YNL041C 2520 nt-0.85□□□□□ -2.55
SPP41P38904 BUD26YDR241W 288 nt-0.85□□□□□ -2.55
SPP41P38904 YGL015CYGL015C 393 nt-0.85□□□□□ -2.55
SPP41P38904 YGL239CYGL239C 315 nt-0.85□□□□□ -2.55
SPP41P38904 YJR141WYJR141W 1044 nt-0.85□□□□□ -2.55
SPP41P38904 YPR096CYPR096C 303 nt-0.85□□□□□ -2.55
SPP41P38904 DCP1YOL149W 696 nt-0.87□□□□□ -2.55
SPP41P38904 tN(GUU)QtN(GUU)Q 71 nt-0.88□□□□□ -2.55
SPP41P38904 YHR131W-AYHR131W-A 246 nt-0.88□□□□□ -2.55
SPP41P38904 ILM1YJR118C 612 nt-0.89□□□□□ -2.55
SPP41P38904 YKL202WYKL202W 582 nt-0.89□□□□□ -2.55
SPP41P38904 YLR171WYLR171W 390 nt-0.89□□□□□ -2.55
SPP41P38904 RPS20YHL015W 366 nt-0.93□□□□□ -2.56
SPP41P38904 YLL006W-AYLL006W-A 177 nt-0.93□□□□□ -2.56
SPP41P38904 YPL205CYPL205C 345 nt-0.93□□□□□ -2.56
SPP41P38904 snR72snR72 98 nt-0.94□□□□□ -2.56
SPP41P38904 YBR223W-AYBR223W-A 120 nt-0.94□□□□□ -2.56
SPP41P38904 APQ13YJL075C 417 nt-0.96□□□□□ -2.56
SPP41P38904 MRPL32YCR003W 552 nt-0.97□□□□□ -2.56
SPP41P38904 YPR039WYPR039W 336 nt-0.97□□□□□ -2.56
SPP41P38904 snR33snR33 183 nt-0.97□□□□□ -2.56
SPP41P38904 YMR307C-AYMR307C-A 195 nt-0.98□□□□□ -2.57
SPP41P38904 snR161snR161 161 nt-0.98□□□□□ -2.57
SPP41P38904 snR36snR36 182 nt-0.98□□□□□ -2.57
SPP41P38904 SEM1YDR363W-A 270 nt-0.99□□□□□ -2.57
SPP41P38904 YGR228WYGR228W 345 nt-0.99□□□□□ -2.57
SPP41P38904 YLR217WYLR217W 324 nt-0.99□□□□□ -2.57
SPP41P38904 DIE2YGR227W 1578 nt-1□□□□□ -2.57
SPP41P38904 ECL1YGR146C 636 nt-1.01□□□□□ -2.57
SPP41P38904 snR51snR51 107 nt-1.02□□□□□ -2.57
SPP41P38904 CUP1-1YHR053C 186 nt-1.03□□□□□ -2.57
SPP41P38904 CUP1-2YHR055C 186 nt-1.03□□□□□ -2.57
SPP41P38904 YIL066W-AYIL066W-A 444 nt-1.03□□□□□ -2.57
SPP41P38904 IPP1YBR011C 864 nt-1.03□□□□□ -2.57
SPP41P38904 YDL185C-AYDL185C-A 228 nt-1.04□□□□□ -2.58
SPP41P38904 YBL107W-AYBL107W-A 105 nt-1.04□□□□□ -2.58
SPP41P38904 YER135CYER135C 393 nt-1.05□□□□□ -2.58
SPP41P38904 YPL182CYPL182C 384 nt-1.05□□□□□ -2.58
SPP41P38904 ATG31YDR022C 591 nt-1.06□□□□□ -2.58
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms