Protein–RNA interactions for Protein: P32343

SSH4, Protein SSH4, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH4P32343 PTP2YOR208W 2253 nt1.38□□□□□ -2.19
SSH4P32343 FYV8YGR196C 2454 nt1.37□□□□□ -2.19
SSH4P32343 GIM4YEL003W 336 nt1.37□□□□□ -2.19
SSH4P32343 RPL34BYIL052C 366 nt1.37□□□□□ -2.19
SSH4P32343 YBL008W-AYBL008W-A 240 nt1.37□□□□□ -2.19
SSH4P32343 OST1YJL002C 1431 nt1.37□□□□□ -2.19
SSH4P32343 YLL007CYLL007C 1998 nt1.37□□□□□ -2.19
SSH4P32343 NUP157YER105C 4176 nt1.37□□□□□ -2.19
SSH4P32343 PIK1YNL267W 3201 nt1.36□□□□□ -2.19
SSH4P32343 YHR175W-AYHR175W-A 150 nt1.36□□□□□ -2.19
SSH4P32343 TAR1YLR154W-C 375 nt1.36□□□□□ -2.19
SSH4P32343 YAR009CYAR009C 3591 nt1.35□□□□□ -2.19
SSH4P32343 YAR029WYAR029W 225 nt1.35□□□□□ -2.19
SSH4P32343 IML1YJR138W 4755 nt1.34□□□□□ -2.19
SSH4P32343 YDR521WYDR521W 336 nt1.34□□□□□ -2.19
SSH4P32343 YGR130CYGR130C 2451 nt1.34□□□□□ -2.2
SSH4P32343 NST1YNL091W 3723 nt1.34□□□□□ -2.2
SSH4P32343 PET127YOR017W 2403 nt1.34□□□□□ -2.2
SSH4P32343 YHL042WYHL042W 453 nt1.33□□□□□ -2.2
SSH4P32343 YPL038W-AYPL038W-A 192 nt1.33□□□□□ -2.2
SSH4P32343 YNL284C-BYNL284C-B 5268 nt1.33□□□□□ -2.2
SSH4P32343 RAD9YDR217C 3930 nt1.33□□□□□ -2.2
SSH4P32343 CDC36YDL165W 576 nt1.32□□□□□ -2.2
SSH4P32343 YCK3YER123W 1575 nt1.32□□□□□ -2.2
SSH4P32343 SPO75YLL005C 2607 nt1.32□□□□□ -2.2
SSH4P32343 CDC25YLR310C 4770 nt1.31□□□□□ -2.2
SSH4P32343 YDR102CYDR102C 333 nt1.31□□□□□ -2.2
SSH4P32343 PBY1YBR094W 2262 nt1.31□□□□□ -2.2
SSH4P32343 YDL240C-AYDL240C-A 138 nt1.3□□□□□ -2.2
SSH4P32343 YAF9YNL107W 681 nt1.3□□□□□ -2.2
SSH4P32343 HMRA2YCR096C 360 nt1.29□□□□□ -2.2
SSH4P32343 YDR169C-AYDR169C-A 150 nt1.29□□□□□ -2.2
SSH4P32343 tR(ACG)Q2tR(ACG)Q2 74 nt1.29□□□□□ -2.2
SSH4P32343 YIL020C-AYIL020C-A 339 nt1.29□□□□□ -2.2
SSH4P32343 WAR1YML076C 2835 nt1.29□□□□□ -2.2
SSH4P32343 YDR048CYDR048C 315 nt1.28□□□□□ -2.2
SSH4P32343 YBR206WYBR206W 324 nt1.28□□□□□ -2.2
SSH4P32343 tQ(UUG)E2tQ(UUG)E2 72 nt1.27□□□□□ -2.21
SSH4P32343 UBP3YER151C 2739 nt1.26□□□□□ -2.21
SSH4P32343 tH(GUG)E1tH(GUG)E1 72 nt1.26□□□□□ -2.21
SSH4P32343 tH(GUG)E2tH(GUG)E2 72 nt1.26□□□□□ -2.21
SSH4P32343 tH(GUG)G1tH(GUG)G1 72 nt1.26□□□□□ -2.21
SSH4P32343 tH(GUG)G2tH(GUG)G2 72 nt1.26□□□□□ -2.21
SSH4P32343 tH(GUG)HtH(GUG)H 72 nt1.26□□□□□ -2.21
SSH4P32343 tH(GUG)KtH(GUG)K 72 nt1.26□□□□□ -2.21
SSH4P32343 tH(GUG)MtH(GUG)M 72 nt1.26□□□□□ -2.21
SSH4P32343 STF2YGR008C 255 nt1.25□□□□□ -2.21
SSH4P32343 HUG1YML058W-A 207 nt1.25□□□□□ -2.21
SSH4P32343 KAP120YPL125W 3099 nt1.25□□□□□ -2.21
SSH4P32343 YDR183C-AYDR183C-A 258 nt1.24□□□□□ -2.21
SSH4P32343 YJL120WYJL120W 324 nt1.24□□□□□ -2.21
SSH4P32343 YPR117WYPR117W 7470 nt1.22□□□□□ -2.21
SSH4P32343 tV(UAC)BtV(UAC)B 74 nt1.22□□□□□ -2.21
SSH4P32343 tV(UAC)DtV(UAC)D 74 nt1.22□□□□□ -2.21
SSH4P32343 RPS25BYLR333C 327 nt1.22□□□□□ -2.21
SSH4P32343 HTL1YCR020W-B 237 nt1.21□□□□□ -2.22
SSH4P32343 ATP6Q0085 780 nt1.21□□□□□ -2.22
SSH4P32343 YBR064WYBR064W 429 nt1.21□□□□□ -2.22
SSH4P32343 TTI1YKL033W 3117 nt1.2□□□□□ -2.22
SSH4P32343 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
SSH4P32343 SSS1YDR086C 243 nt1.19□□□□□ -2.22
SSH4P32343 YMR321CYMR321C 318 nt1.19□□□□□ -2.22
SSH4P32343 BUD3YCL014W 4911 nt1.19□□□□□ -2.22
SSH4P32343 ISD11YER048W-A 285 nt1.18□□□□□ -2.22
SSH4P32343 YPL225WYPL225W 441 nt1.18□□□□□ -2.22
SSH4P32343 SPO21YOL091W 1830 nt1.17□□□□□ -2.22
SSH4P32343 YIL115W-AYIL115W-A 372 nt1.16□□□□□ -2.22
SSH4P32343 YOR011W-AYOR011W-A 207 nt1.16□□□□□ -2.22
SSH4P32343 snR36snR36 182 nt1.16□□□□□ -2.22
SSH4P32343 APL1YJR005W 2103 nt1.16□□□□□ -2.22
SSH4P32343 DBP6YNR038W 1890 nt1.16□□□□□ -2.22
SSH4P32343 YDL196WYDL196W 330 nt1.15□□□□□ -2.23
SSH4P32343 OLI1Q0130 231 nt1.15□□□□□ -2.23
SSH4P32343 YKL118WYKL118W 312 nt1.15□□□□□ -2.23
SSH4P32343 YFL063WYFL063W 456 nt1.14□□□□□ -2.23
SSH4P32343 SIP4YJL089W 2490 nt1.14□□□□□ -2.23
SSH4P32343 AHC1YOR023C 1701 nt1.14□□□□□ -2.23
SSH4P32343 SMC1YFL008W 3678 nt1.13□□□□□ -2.23
SSH4P32343 YDR344CYDR344C 444 nt1.13□□□□□ -2.23
SSH4P32343 RPL33BYOR234C 324 nt1.13□□□□□ -2.23
SSH4P32343 YOR282WYOR282W 321 nt1.12□□□□□ -2.23
SSH4P32343 SCC2YDR180W 4482 nt1.12□□□□□ -2.23
SSH4P32343 YDL073WYDL073W 2955 nt1.12□□□□□ -2.23
SSH4P32343 EMT1tM(CAU)D 73 nt1.11□□□□□ -2.23
SSH4P32343 EMT5tM(CAU)J1 73 nt1.11□□□□□ -2.23
SSH4P32343 EMT3tM(CAU)J2 73 nt1.11□□□□□ -2.23
SSH4P32343 EMT4tM(CAU)M 73 nt1.11□□□□□ -2.23
SSH4P32343 EMT2tM(CAU)O2 73 nt1.11□□□□□ -2.23
SSH4P32343 NOP9YJL010C 2001 nt1.11□□□□□ -2.23
SSH4P32343 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
SSH4P32343 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
SSH4P32343 COG8YML071C 1824 nt1.1□□□□□ -2.23
SSH4P32343 PRP16YKR086W 3216 nt1.1□□□□□ -2.23
SSH4P32343 GEA2YEL022W 4380 nt1.1□□□□□ -2.23
SSH4P32343 YFL032WYFL032W 321 nt1.1□□□□□ -2.23
SSH4P32343 YGL149WYGL149W 306 nt1.1□□□□□ -2.23
SSH4P32343 YIL032CYIL032C 357 nt1.1□□□□□ -2.23
SSH4P32343 INA22YIR024C 651 nt1.1□□□□□ -2.23
SSH4P32343 RPL39YJL189W 156 nt1.1□□□□□ -2.23
SSH4P32343 YKL136WYKL136W 399 nt1.1□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms