Protein–RNA interactions for Protein: P15731

UBC4, Ubiquitin-conjugating enzyme E2 4, yeast

Predictions only

Length 148 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC4	P15731	PAA1	YDR071C	576 nt		-0.63	□□□□□ -2.51
UBC4	P15731	LRP1	YHR081W	555 nt		-0.63	□□□□□ -2.51
UBC4	P15731	YLR198C	YLR198C	360 nt		-0.63	□□□□□ -2.51
UBC4	P15731	RSM23	YGL129C	1353 nt		-0.63	□□□□□ -2.51
UBC4	P15731	YDR269C	YDR269C	324 nt		-0.64	□□□□□ -2.51
UBC4	P15731	NNF2	YGR089W	2811 nt		-0.65	□□□□□ -2.51
UBC4	P15731	COY1	YKL179C	2040 nt		-0.65	□□□□□ -2.51
UBC4	P15731	ATG16	YMR159C	453 nt		-0.65	□□□□□ -2.51
UBC4	P15731	YMR304C-A	YMR304C-A	351 nt		-0.65	□□□□□ -2.51
UBC4	P15731	YHR050W-A	YHR050W-A	171 nt		-0.66	□□□□□ -2.52
UBC4	P15731	YBR206W	YBR206W	324 nt		-0.66	□□□□□ -2.52
UBC4	P15731	RRI2	YOL117W	1938 nt		-0.66	□□□□□ -2.52
UBC4	P15731	NIP1	YMR309C	2439 nt		-0.67	□□□□□ -2.52
UBC4	P15731	YAP6	YDR259C	1152 nt		-0.67	□□□□□ -2.52
UBC4	P15731	NIP100	YPL174C	2607 nt		-0.68	□□□□□ -2.52
UBC4	P15731	YFR012W-A	YFR012W-A	87 nt		-0.68	□□□□□ -2.52
UBC4	P15731	YKL068W-A	YKL068W-A	237 nt		-0.68	□□□□□ -2.52
UBC4	P15731	HTB1	YDR224C	396 nt		-0.69	□□□□□ -2.52
UBC4	P15731	SNU56	YDR240C	1479 nt		-0.69	□□□□□ -2.52
UBC4	P15731	LOC1	YFR001W	615 nt		-0.7	□□□□□ -2.52
UBC4	P15731	YOR345C	YOR345C	351 nt		-0.7	□□□□□ -2.52
UBC4	P15731	YJL113W	YJL113W	4647 nt		-0.7	□□□□□ -2.52
UBC4	P15731	SPO21	YOL091W	1830 nt		-0.71	□□□□□ -2.52
UBC4	P15731	YCR022C	YCR022C	345 nt		-0.71	□□□□□ -2.52
UBC4	P15731	YKL023C-A	YKL023C-A	228 nt		-0.71	□□□□□ -2.52
UBC4	P15731	YER188C-A	YER188C-A	300 nt		-0.72	□□□□□ -2.52
UBC4	P15731	YIR044C	YIR044C	186 nt		-0.72	□□□□□ -2.52
UBC4	P15731	YJL007C	YJL007C	315 nt		-0.72	□□□□□ -2.52
UBC4	P15731	MYO1	YHR023W	5787 nt		-0.73	□□□□□ -2.53
UBC4	P15731	RPL22B	YFL034C-A	369 nt		-0.73	□□□□□ -2.53
UBC4	P15731	POL32	YJR043C	1053 nt		-0.73	□□□□□ -2.53
UBC4	P15731	PBI2	YNL015W	228 nt		-0.73	□□□□□ -2.53
UBC4	P15731	YOR248W	YOR248W	303 nt		-0.73	□□□□□ -2.53
UBC4	P15731	CWC23	YGL128C	852 nt		-0.74	□□□□□ -2.53
UBC4	P15731	YPL261C	YPL261C	309 nt		-0.74	□□□□□ -2.53
UBC4	P15731	YDR220C	YDR220C	294 nt		-0.75	□□□□□ -2.53
UBC4	P15731	SRB7	YDR308C	423 nt		-0.75	□□□□□ -2.53
UBC4	P15731	HTB2	YBL002W	396 nt		-0.75	□□□□□ -2.53
UBC4	P15731	YOL160W	YOL160W	342 nt		-0.75	□□□□□ -2.53
UBC4	P15731	snR34	snR34	203 nt		-0.76	□□□□□ -2.53
UBC4	P15731	YHL046W-A	YHL046W-A	327 nt		-0.77	□□□□□ -2.53
UBC4	P15731	tT(UGU)G1	tT(UGU)G1	72 nt		-0.77	□□□□□ -2.53
UBC4	P15731	tT(UGU)G2	tT(UGU)G2	72 nt		-0.77	□□□□□ -2.53
UBC4	P15731	tT(UGU)P	tT(UGU)P	72 nt		-0.77	□□□□□ -2.53
UBC4	P15731	YMR013C-A	YMR013C-A	150 nt		-0.77	□□□□□ -2.53
UBC4	P15731	YNL146C-A	YNL146C-A	195 nt		-0.78	□□□□□ -2.53
UBC4	P15731	YBL008W-A	YBL008W-A	240 nt		-0.8	□□□□□ -2.54
UBC4	P15731	UBS1	YBR165W	834 nt		-0.8	□□□□□ -2.54
UBC4	P15731	RPM2	YML091C	3609 nt		-0.8	□□□□□ -2.54
UBC4	P15731	YPL205C	YPL205C	345 nt		-0.81	□□□□□ -2.54
UBC4	P15731	YHR131W-A	YHR131W-A	246 nt		-0.82	□□□□□ -2.54
UBC4	P15731	IRC16	YPR038W	360 nt		-0.82	□□□□□ -2.54
UBC4	P15731	YGR270C-A	YGR270C-A	219 nt		-0.83	□□□□□ -2.54
UBC4	P15731	TIM13	YGR181W	318 nt		-0.84	□□□□□ -2.54
UBC4	P15731	YJR141W	YJR141W	1044 nt		-0.84	□□□□□ -2.54
UBC4	P15731	YML108W	YML108W	318 nt		-0.84	□□□□□ -2.54
UBC4	P15731	PTP2	YOR208W	2253 nt		-0.85	□□□□□ -2.54
UBC4	P15731	YGL015C	YGL015C	393 nt		-0.85	□□□□□ -2.55
UBC4	P15731	DIE2	YGR227W	1578 nt		-0.85	□□□□□ -2.55
UBC4	P15731	VAM3	YOR106W	852 nt		-0.85	□□□□□ -2.55
UBC4	P15731	YGL239C	YGL239C	315 nt		-0.86	□□□□□ -2.55
UBC4	P15731	YMR075C-A	YMR075C-A	366 nt		-0.86	□□□□□ -2.55
UBC4	P15731	tN(GUU)Q	tN(GUU)Q	71 nt		-0.87	□□□□□ -2.55
UBC4	P15731	YKL202W	YKL202W	582 nt		-0.88	□□□□□ -2.55
UBC4	P15731	DCP1	YOL149W	696 nt		-0.88	□□□□□ -2.55
UBC4	P15731	ILM1	YJR118C	612 nt		-0.89	□□□□□ -2.55
UBC4	P15731	snR36	snR36	182 nt		-0.89	□□□□□ -2.55
UBC4	P15731	EMC4	YGL231C	573 nt		-0.9	□□□□□ -2.55
UBC4	P15731	APQ13	YJL075C	417 nt		-0.9	□□□□□ -2.55
UBC4	P15731	YLR171W	YLR171W	390 nt		-0.9	□□□□□ -2.55
UBC4	P15731	snR33	snR33	183 nt		-0.9	□□□□□ -2.55
UBC4	P15731	snR72	snR72	98 nt		-0.91	□□□□□ -2.56
UBC4	P15731	YLL006W-A	YLL006W-A	177 nt		-0.91	□□□□□ -2.56
UBC4	P15731	snR161	snR161	161 nt		-0.91	□□□□□ -2.56
UBC4	P15731	YPR096C	YPR096C	303 nt		-0.91	□□□□□ -2.56
UBC4	P15731	YHL009W-B	YHL009W-B	5409 nt		-0.92	□□□□□ -2.56
UBC4	P15731	BUD26	YDR241W	288 nt		-0.92	□□□□□ -2.56
UBC4	P15731	YCR038W-A	YCR038W-A	126 nt		-0.94	□□□□□ -2.56
UBC4	P15731	ECL1	YGR146C	636 nt		-0.94	□□□□□ -2.56
UBC4	P15731	SEM1	YDR363W-A	270 nt		-0.96	□□□□□ -2.56
UBC4	P15731	RPS20	YHL015W	366 nt		-0.96	□□□□□ -2.56
UBC4	P15731	YMR307C-A	YMR307C-A	195 nt		-0.97	□□□□□ -2.56
UBC4	P15731	YPR039W	YPR039W	336 nt		-0.98	□□□□□ -2.57
UBC4	P15731	YGR115C	YGR115C	780 nt		-0.99	□□□□□ -2.57
UBC4	P15731	YBR223W-A	YBR223W-A	120 nt		-0.99	□□□□□ -2.57
UBC4	P15731	YDL185C-A	YDL185C-A	228 nt		-1	□□□□□ -2.57
UBC4	P15731	RPF1	YHR088W	888 nt		-1.02	□□□□□ -2.57
UBC4	P15731	YNL067W-B	YNL067W-B	141 nt		-1.02	□□□□□ -2.57
UBC4	P15731	snR51	snR51	107 nt		-1.02	□□□□□ -2.57
UBC4	P15731	YBL107W-A	YBL107W-A	105 nt		-1.03	□□□□□ -2.57
UBC4	P15731	IPP1	YBR011C	864 nt		-1.03	□□□□□ -2.57
UBC4	P15731	MRPL32	YCR003W	552 nt		-1.04	□□□□□ -2.58
UBC4	P15731	ATG31	YDR022C	591 nt		-1.04	□□□□□ -2.58
UBC4	P15731	YGR228W	YGR228W	345 nt		-1.04	□□□□□ -2.58
UBC4	P15731	YNL319W	YNL319W	441 nt		-1.04	□□□□□ -2.58
UBC4	P15731	YCR018C-A	YCR018C-A	255 nt		-1.05	□□□□□ -2.58
UBC4	P15731	YIL066W-A	YIL066W-A	444 nt		-1.05	□□□□□ -2.58
UBC4	P15731	YJL120W	YJL120W	324 nt		-1.05	□□□□□ -2.58
UBC4	P15731	YLR217W	YLR217W	324 nt		-1.05	□□□□□ -2.58
UBC4	P15731	MRPS8	YMR158W	468 nt		-1.06	□□□□□ -2.58

Retrieved 100 of 7,029 protein–RNA pairs in 37.3 ms