Protein–RNA interactions for Protein: P00546

CDC28, Cyclin-dependent kinase 1, yeastyeast

Known RBP Predictions only

Length 298 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC28P00546 tF(GAA)BtF(GAA)B 73 nt0.41□□□□□ -2.34
CDC28P00546 tF(GAA)FtF(GAA)F 73 nt0.41□□□□□ -2.34
CDC28P00546 tF(GAA)GtF(GAA)G 73 nt0.41□□□□□ -2.34
CDC28P00546 tF(GAA)H1tF(GAA)H1 73 nt0.41□□□□□ -2.34
CDC28P00546 tF(GAA)H2tF(GAA)H2 73 nt0.41□□□□□ -2.34
CDC28P00546 tF(GAA)MtF(GAA)M 73 nt0.41□□□□□ -2.34
CDC28P00546 tF(GAA)P1tF(GAA)P1 73 nt0.41□□□□□ -2.34
CDC28P00546 tF(GAA)P2tF(GAA)P2 73 nt0.41□□□□□ -2.34
CDC28P00546 YLR287CYLR287C 1068 nt0.41□□□□□ -2.34
CDC28P00546 YPL044CYPL044C 549 nt0.41□□□□□ -2.34
CDC28P00546 YDR344CYDR344C 444 nt0.4□□□□□ -2.35
CDC28P00546 SDH7YDR511W 402 nt0.4□□□□□ -2.35
CDC28P00546 YNR025CYNR025C 360 nt0.4□□□□□ -2.35
CDC28P00546 YOR218CYOR218C 420 nt0.4□□□□□ -2.35
CDC28P00546 YPL229WYPL229W 621 nt0.4□□□□□ -2.35
CDC28P00546 ULP2YIL031W 3105 nt0.4□□□□□ -2.35
CDC28P00546 INP2YMR163C 2118 nt0.4□□□□□ -2.35
CDC28P00546 AIM29YKR074W 468 nt0.39□□□□□ -2.35
CDC28P00546 UBC7YMR022W 498 nt0.39□□□□□ -2.35
CDC28P00546 YPL185WYPL185W 396 nt0.39□□□□□ -2.35
CDC28P00546 YCK3YER123W 1575 nt0.39□□□□□ -2.35
CDC28P00546 DIE2YGR227W 1578 nt0.39□□□□□ -2.35
CDC28P00546 YNL058CYNL058C 951 nt0.38□□□□□ -2.35
CDC28P00546 YSP1YHR155W 3687 nt0.36□□□□□ -2.35
CDC28P00546 RPS20YHL015W 366 nt0.36□□□□□ -2.35
CDC28P00546 YBL008W-AYBL008W-A 240 nt0.36□□□□□ -2.35
CDC28P00546 snR54snR54 86 nt0.36□□□□□ -2.35
CDC28P00546 FMP27YLR454W 7887 nt0.36□□□□□ -2.35
CDC28P00546 PTP2YOR208W 2253 nt0.36□□□□□ -2.35
CDC28P00546 YAP6YDR259C 1152 nt0.35□□□□□ -2.35
CDC28P00546 YEL030C-AYEL030C-A 315 nt0.35□□□□□ -2.35
CDC28P00546 OLI1Q0130 231 nt0.35□□□□□ -2.35
CDC28P00546 YIL134C-AYIL134C-A 204 nt0.35□□□□□ -2.35
CDC28P00546 BSC3YLR465C 309 nt0.35□□□□□ -2.35
CDC28P00546 YBR064WYBR064W 429 nt0.35□□□□□ -2.35
CDC28P00546 MAM33YIL070C 801 nt0.34□□□□□ -2.36
CDC28P00546 NIP100YPL174C 2607 nt0.33□□□□□ -2.36
CDC28P00546 BI2Q0110 1272 nt0.33□□□□□ -2.36
CDC28P00546 RPL26BYGR034W 384 nt0.33□□□□□ -2.36
CDC28P00546 YHL041WYHL041W 450 nt0.33□□□□□ -2.36
CDC28P00546 RPS24BYIL069C 408 nt0.33□□□□□ -2.36
CDC28P00546 YKL145W-AYKL145W-A 93 nt0.33□□□□□ -2.36
CDC28P00546 ECL1YGR146C 636 nt0.32□□□□□ -2.36
CDC28P00546 YKL083WYKL083W 615 nt0.32□□□□□ -2.36
CDC28P00546 YOR192C-CYOR192C-C 237 nt0.32□□□□□ -2.36
CDC28P00546 BEM3YPL115C 3387 nt0.32□□□□□ -2.36
CDC28P00546 AI1Q0050 2505 nt0.31□□□□□ -2.36
CDC28P00546 MCM10YIL150C 1716 nt0.31□□□□□ -2.36
CDC28P00546 ATG31YDR022C 591 nt0.31□□□□□ -2.36
CDC28P00546 PAA1YDR071C 576 nt0.31□□□□□ -2.36
CDC28P00546 YJR011CYJR011C 786 nt0.31□□□□□ -2.36
CDC28P00546 YNL122CYNL122C 348 nt0.31□□□□□ -2.36
CDC28P00546 MLP1YKR095W 5628 nt0.3□□□□□ -2.36
CDC28P00546 YLR171WYLR171W 390 nt0.3□□□□□ -2.36
CDC28P00546 ABF2YMR072W 552 nt0.3□□□□□ -2.36
CDC28P00546 YBR206WYBR206W 324 nt0.3□□□□□ -2.36
CDC28P00546 FYV10YIL097W 1551 nt0.3□□□□□ -2.36
CDC28P00546 SPO21YOL091W 1830 nt0.29□□□□□ -2.36
CDC28P00546 YAR047CYAR047C 321 nt0.29□□□□□ -2.36
CDC28P00546 BIR1YJR089W 2865 nt0.29□□□□□ -2.36
CDC28P00546 CBS1YDL069C 690 nt0.28□□□□□ -2.36
CDC28P00546 SBH1YER087C-B 249 nt0.28□□□□□ -2.36
CDC28P00546 YGR174W-AYGR174W-A 87 nt0.28□□□□□ -2.36
CDC28P00546 YJL127W-AYJL127W-A 117 nt0.28□□□□□ -2.36
CDC28P00546 IQG1YPL242C 4488 nt0.28□□□□□ -2.37
CDC28P00546 QCR9YGR183C 201 nt0.27□□□□□ -2.37
CDC28P00546 PET111YMR257C 2403 nt0.27□□□□□ -2.37
CDC28P00546 TRS65YGR166W 1683 nt0.27□□□□□ -2.37
CDC28P00546 YER006C-AYER006C-A 318 nt0.26□□□□□ -2.37
CDC28P00546 YOL014WYOL014W 375 nt0.26□□□□□ -2.37
CDC28P00546 YOR032W-AYOR032W-A 201 nt0.26□□□□□ -2.37
CDC28P00546 ASE1YOR058C 2658 nt0.25□□□□□ -2.37
CDC28P00546 PCF11YDR228C 1881 nt0.25□□□□□ -2.37
CDC28P00546 MLP2YIL149C 5040 nt0.25□□□□□ -2.37
CDC28P00546 YEL050W-AYEL050W-A 192 nt0.25□□□□□ -2.37
CDC28P00546 YGR290WYGR290W 444 nt0.25□□□□□ -2.37
CDC28P00546 YML007C-AYML007C-A 111 nt0.25□□□□□ -2.37
CDC28P00546 STE5YDR103W 2754 nt0.25□□□□□ -2.37
CDC28P00546 VIK1YPL253C 1944 nt0.25□□□□□ -2.37
CDC28P00546 FYV7YLR068W 456 nt0.24□□□□□ -2.37
CDC28P00546 YLR101CYLR101C 396 nt0.24□□□□□ -2.37
CDC28P00546 YPR002C-AYPR002C-A 198 nt0.24□□□□□ -2.37
CDC28P00546 SEC8YPR055W 3198 nt0.23□□□□□ -2.37
CDC28P00546 PAU12YGR294W 363 nt0.23□□□□□ -2.37
CDC28P00546 ISF1YMR081C 1017 nt0.23□□□□□ -2.37
CDC28P00546 YOL013W-BYOL013W-B 291 nt0.23□□□□□ -2.37
CDC28P00546 HAL9YOL089C 3093 nt0.22□□□□□ -2.37
CDC28P00546 MRPL50YNR022C 420 nt0.22□□□□□ -2.37
CDC28P00546 YPR160W-AYPR160W-A 81 nt0.22□□□□□ -2.37
CDC28P00546 YNL054W-BYNL054W-B 5250 nt0.2□□□□□ -2.38
CDC28P00546 YFR012W-AYFR012W-A 87 nt0.2□□□□□ -2.38
CDC28P00546 COX5BYIL111W 456 nt0.2□□□□□ -2.38
CDC28P00546 YLR399W-AYLR399W-A 105 nt0.2□□□□□ -2.38
CDC28P00546 PRP5YBR237W 2550 nt0.19□□□□□ -2.38
CDC28P00546 YDL158CYDL158C 309 nt0.19□□□□□ -2.38
CDC28P00546 YLR456WYLR456W 615 nt0.19□□□□□ -2.38
CDC28P00546 snR41snR41 95 nt0.19□□□□□ -2.38
CDC28P00546 HMRA2YCR096C 360 nt0.18□□□□□ -2.38
CDC28P00546 OST4YDL232W 111 nt0.18□□□□□ -2.38
CDC28P00546 YDR426CYDR426C 378 nt0.18□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 79.3 ms