Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AL162377.1-201ENST00000618844 1793 ntBASIC19.42■□□□□ 0.7
KRT78Q8N1N4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT78Q8N1N4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.4■□□□□ 0.7
KRT78Q8N1N4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 SMG8-203ENST00000578922 2178 ntBASIC19.4■□□□□ 0.7
KRT78Q8N1N4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT78Q8N1N4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT78Q8N1N4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
KRT78Q8N1N4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 AC083906.2-201ENST00000511578 360 ntBASIC19.39■□□□□ 0.69
KRT78Q8N1N4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.39■□□□□ 0.69
KRT78Q8N1N4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 KRT17P1-201ENST00000399211 1546 ntBASIC19.39■□□□□ 0.69
KRT78Q8N1N4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT78Q8N1N4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT78Q8N1N4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT78Q8N1N4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms