Protein–RNA interactions for Protein: Q6B2U8

TDA8, Topoisomerase I damage affected protein 8, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA8Q6B2U8 YPR137C-BYPR137C-B 5268 nt0.58□□□□□ -2.32
TDA8Q6B2U8 YHR052W-AYHR052W-A 195 nt0.58□□□□□ -2.32
TDA8Q6B2U8 YHR054W-AYHR054W-A 195 nt0.58□□□□□ -2.32
TDA8Q6B2U8 EAF6YJR082C 342 nt0.58□□□□□ -2.32
TDA8Q6B2U8 ERP4YOR016C 624 nt0.58□□□□□ -2.32
TDA8Q6B2U8 YBR076C-AYBR076C-A 267 nt0.58□□□□□ -2.32
TDA8Q6B2U8 YAR009CYAR009C 3591 nt0.58□□□□□ -2.32
TDA8Q6B2U8 ISD11YER048W-A 285 nt0.57□□□□□ -2.32
TDA8Q6B2U8 YER087C-AYER087C-A 552 nt0.57□□□□□ -2.32
TDA8Q6B2U8 ALG13YGL047W 609 nt0.57□□□□□ -2.32
TDA8Q6B2U8 YKL202WYKL202W 582 nt0.57□□□□□ -2.32
TDA8Q6B2U8 YLR269CYLR269C 351 nt0.57□□□□□ -2.32
TDA8Q6B2U8 YMR290W-AYMR290W-A 348 nt0.57□□□□□ -2.32
TDA8Q6B2U8 PBI2YNL015W 228 nt0.57□□□□□ -2.32
TDA8Q6B2U8 YPR159C-AYPR159C-A 102 nt0.57□□□□□ -2.32
TDA8Q6B2U8 PAU24YBR301W 363 nt0.57□□□□□ -2.32
TDA8Q6B2U8 GPG1YGL121C 381 nt0.56□□□□□ -2.32
TDA8Q6B2U8 YGR042WYGR042W 816 nt0.56□□□□□ -2.32
TDA8Q6B2U8 YML003WYML003W 873 nt0.56□□□□□ -2.32
TDA8Q6B2U8 HCH1YNL281W 462 nt0.56□□□□□ -2.32
TDA8Q6B2U8 IES4YOR189W 351 nt0.56□□□□□ -2.32
TDA8Q6B2U8 DBP6YNR038W 1890 nt0.56□□□□□ -2.32
TDA8Q6B2U8 TIM13YGR181W 318 nt0.55□□□□□ -2.32
TDA8Q6B2U8 YJL135WYJL135W 318 nt0.55□□□□□ -2.32
TDA8Q6B2U8 NFU1YKL040C 771 nt0.55□□□□□ -2.32
TDA8Q6B2U8 RKR1YMR247C 4689 nt0.54□□□□□ -2.32
TDA8Q6B2U8 YHL042WYHL042W 453 nt0.54□□□□□ -2.32
TDA8Q6B2U8 LOA1YPR139C 903 nt0.54□□□□□ -2.32
TDA8Q6B2U8 EMC4YGL231C 573 nt0.53□□□□□ -2.32
TDA8Q6B2U8 YHR125WYHR125W 306 nt0.53□□□□□ -2.32
TDA8Q6B2U8 RPB10YOR210W 213 nt0.53□□□□□ -2.32
TDA8Q6B2U8 YPL261CYPL261C 309 nt0.53□□□□□ -2.32
TDA8Q6B2U8 SEC1YDR164C 2175 nt0.53□□□□□ -2.32
TDA8Q6B2U8 YHR063W-AYHR063W-A 336 nt0.52□□□□□ -2.33
TDA8Q6B2U8 RPF1YHR088W 888 nt0.52□□□□□ -2.33
TDA8Q6B2U8 STE18YJR086W 333 nt0.52□□□□□ -2.33
TDA8Q6B2U8 YMR031W-AYMR031W-A 327 nt0.52□□□□□ -2.33
TDA8Q6B2U8 YMR141W-AYMR141W-A 225 nt0.52□□□□□ -2.33
TDA8Q6B2U8 YOL160WYOL160W 342 nt0.52□□□□□ -2.33
TDA8Q6B2U8 TTI1YKL033W 3117 nt0.52□□□□□ -2.33
TDA8Q6B2U8 PAC1YOR269W 1485 nt0.51□□□□□ -2.33
TDA8Q6B2U8 YOR282WYOR282W 321 nt0.51□□□□□ -2.33
TDA8Q6B2U8 PKH2YOL100W 3246 nt0.5□□□□□ -2.33
TDA8Q6B2U8 YER084W-AYER084W-A 513 nt0.5□□□□□ -2.33
TDA8Q6B2U8 YML108WYML108W 318 nt0.5□□□□□ -2.33
TDA8Q6B2U8 YMR272W-AYMR272W-A 114 nt0.5□□□□□ -2.33
TDA8Q6B2U8 YNR025CYNR025C 360 nt0.5□□□□□ -2.33
TDA8Q6B2U8 GEA2YEL022W 4380 nt0.48□□□□□ -2.33
TDA8Q6B2U8 PMP1YCR024C-A 123 nt0.48□□□□□ -2.33
TDA8Q6B2U8 YDL011CYDL011C 324 nt0.48□□□□□ -2.33
TDA8Q6B2U8 NHP2YDL208W 471 nt0.48□□□□□ -2.33
TDA8Q6B2U8 WIP1YDR374W-A 270 nt0.48□□□□□ -2.33
TDA8Q6B2U8 ECM12YHR021W-A 456 nt0.48□□□□□ -2.33
TDA8Q6B2U8 YIR044CYIR044C 186 nt0.48□□□□□ -2.33
TDA8Q6B2U8 YBL071CYBL071C 309 nt0.48□□□□□ -2.33
TDA8Q6B2U8 RAD34YDR314C 2079 nt0.48□□□□□ -2.33
TDA8Q6B2U8 BFR2YDR299W 1605 nt0.48□□□□□ -2.33
TDA8Q6B2U8 snR72snR72 98 nt0.47□□□□□ -2.33
TDA8Q6B2U8 YHR130CYHR130C 336 nt0.47□□□□□ -2.33
TDA8Q6B2U8 YJL020W-AYJL020W-A 258 nt0.47□□□□□ -2.33
TDA8Q6B2U8 RPL38YLR325C 237 nt0.47□□□□□ -2.33
TDA8Q6B2U8 YDR521WYDR521W 336 nt0.46□□□□□ -2.34
TDA8Q6B2U8 ZEO1YOL109W 342 nt0.46□□□□□ -2.34
TDA8Q6B2U8 NOP9YJL010C 2001 nt0.45□□□□□ -2.34
TDA8Q6B2U8 AIM29YKR074W 468 nt0.45□□□□□ -2.34
TDA8Q6B2U8 CMC4YMR194C-B 222 nt0.45□□□□□ -2.34
TDA8Q6B2U8 snR51snR51 107 nt0.45□□□□□ -2.34
TDA8Q6B2U8 UTP10YJL109C 5310 nt0.44□□□□□ -2.34
TDA8Q6B2U8 CUL3YGR003W 2235 nt0.44□□□□□ -2.34
TDA8Q6B2U8 YLR287CYLR287C 1068 nt0.44□□□□□ -2.34
TDA8Q6B2U8 UBP3YER151C 2739 nt0.44□□□□□ -2.34
TDA8Q6B2U8 YLL007CYLL007C 1998 nt0.44□□□□□ -2.34
TDA8Q6B2U8 DIE2YGR227W 1578 nt0.44□□□□□ -2.34
TDA8Q6B2U8 LTE1YAL024C 4308 nt0.43□□□□□ -2.34
TDA8Q6B2U8 SDH7YDR511W 402 nt0.43□□□□□ -2.34
TDA8Q6B2U8 CDC33YOL139C 642 nt0.43□□□□□ -2.34
TDA8Q6B2U8 YPL229WYPL229W 621 nt0.43□□□□□ -2.34
TDA8Q6B2U8 CHS6YJL099W 2241 nt0.42□□□□□ -2.34
TDA8Q6B2U8 YML002WYML002W 2214 nt0.42□□□□□ -2.34
TDA8Q6B2U8 RTT102YGR275W 474 nt0.42□□□□□ -2.34
TDA8Q6B2U8 INP2YMR163C 2118 nt0.41□□□□□ -2.34
TDA8Q6B2U8 YCK3YER123W 1575 nt0.41□□□□□ -2.34
TDA8Q6B2U8 NPR2YEL062W 1848 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)BtT(AGU)B 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)CtT(AGU)C 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)DtT(AGU)D 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)HtT(AGU)H 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)I1tT(AGU)I1 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)I2tT(AGU)I2 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)JtT(AGU)J 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)N1tT(AGU)N1 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)N2tT(AGU)N2 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)O1tT(AGU)O1 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 tT(AGU)O2tT(AGU)O2 73 nt0.41□□□□□ -2.34
TDA8Q6B2U8 RPL26AYLR344W 384 nt0.41□□□□□ -2.34
TDA8Q6B2U8 YPL044CYPL044C 549 nt0.41□□□□□ -2.34
TDA8Q6B2U8 snR54snR54 86 nt0.41□□□□□ -2.34
TDA8Q6B2U8 YDR344CYDR344C 444 nt0.4□□□□□ -2.35
TDA8Q6B2U8 BI2Q0110 1272 nt0.4□□□□□ -2.35
TDA8Q6B2U8 UBC7YMR022W 498 nt0.4□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms