Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 IRR1YIL026C 3453 nt2.98□□□□□ -1.93
CAF120P53836 YDR354C-AYDR354C-A 144 nt2.98□□□□□ -1.93
CAF120P53836 tQ(UUG)BtQ(UUG)B 72 nt2.98□□□□□ -1.93
CAF120P53836 DRS2YAL026C 4068 nt2.98□□□□□ -1.93
CAF120P53836 GLG1YKR058W 1851 nt2.98□□□□□ -1.93
CAF120P53836 SSN2YDR443C 4263 nt2.98□□□□□ -1.93
CAF120P53836 SWI5YDR146C 2130 nt2.98□□□□□ -1.93
CAF120P53836 FIR1YER032W 2631 nt2.97□□□□□ -1.93
CAF120P53836 IFH1YLR223C 3258 nt2.97□□□□□ -1.93
CAF120P53836 snR64snR64 101 nt2.97□□□□□ -1.93
CAF120P53836 YBL100W-CYBL100W-C 120 nt2.97□□□□□ -1.93
CAF120P53836 snR76snR76 109 nt2.96□□□□□ -1.94
CAF120P53836 COG6YNL041C 2520 nt2.96□□□□□ -1.94
CAF120P53836 TTI1YKL033W 3117 nt2.96□□□□□ -1.94
CAF120P53836 DNA2YHR164C 4569 nt2.95□□□□□ -1.94
CAF120P53836 DNL4YOR005C 2835 nt2.95□□□□□ -1.94
CAF120P53836 NAM7YMR080C 2916 nt2.95□□□□□ -1.94
CAF120P53836 YGR240C-AYGR240C-A 201 nt2.95□□□□□ -1.94
CAF120P53836 LCL1YPL056C 306 nt2.95□□□□□ -1.94
CAF120P53836 snR50snR50 90 nt2.95□□□□□ -1.94
CAF120P53836 GCV2YMR189W 3105 nt2.95□□□□□ -1.94
CAF120P53836 INP53YOR109W 3324 nt2.94□□□□□ -1.94
CAF120P53836 ECM21YBL101C 3354 nt2.94□□□□□ -1.94
CAF120P53836 RPS26AYGL189C 360 nt2.94□□□□□ -1.94
CAF120P53836 YJL026C-AYJL026C-A 222 nt2.94□□□□□ -1.94
CAF120P53836 YKL096C-BYKL096C-B 150 nt2.94□□□□□ -1.94
CAF120P53836 MDM1YML104C 3384 nt2.93□□□□□ -1.94
CAF120P53836 YCR102W-AYCR102W-A 198 nt2.93□□□□□ -1.94
CAF120P53836 NOP10YHR072W-A 177 nt2.93□□□□□ -1.94
CAF120P53836 RGM1YMR182C 636 nt2.93□□□□□ -1.94
CAF120P53836 INP52YNL106C 3552 nt2.92□□□□□ -1.94
CAF120P53836 APL1YJR005W 2103 nt2.92□□□□□ -1.94
CAF120P53836 YMR242W-AYMR242W-A 90 nt2.92□□□□□ -1.94
CAF120P53836 YOL164W-AYOL164W-A 183 nt2.92□□□□□ -1.94
CAF120P53836 RIC1YLR039C 3171 nt2.92□□□□□ -1.94
CAF120P53836 YLR035C-AYLR035C-A 3468 nt2.92□□□□□ -1.94
CAF120P53836 BIR1YJR089W 2865 nt2.91□□□□□ -1.94
CAF120P53836 REV3YPL167C 4515 nt2.91□□□□□ -1.94
CAF120P53836 YLL020CYLL020C 306 nt2.91□□□□□ -1.94
CAF120P53836 LHS1YKL073W 2646 nt2.91□□□□□ -1.94
CAF120P53836 YOR108C-AYOR108C-A 210 nt2.9□□□□□ -1.95
CAF120P53836 RGA2YDR379W 3030 nt2.9□□□□□ -1.95
CAF120P53836 NMD2YHR077C 3270 nt2.9□□□□□ -1.95
CAF120P53836 YIL156W-BYIL156W-B 222 nt2.89□□□□□ -1.95
CAF120P53836 YBL039C-AYBL039C-A 84 nt2.89□□□□□ -1.95
CAF120P53836 PTP2YOR208W 2253 nt2.89□□□□□ -1.95
CAF120P53836 KSP1YHR082C 3090 nt2.88□□□□□ -1.95
CAF120P53836 SDC25YLL016W 3147 nt2.88□□□□□ -1.95
CAF120P53836 DYN1YKR054C 12279 nt2.88□□□□□ -1.95
CAF120P53836 ACB1YGR037C 264 nt2.88□□□□□ -1.95
CAF120P53836 HRD3YLR207W 2502 nt2.87□□□□□ -1.95
CAF120P53836 SUL1YBR294W 2580 nt2.87□□□□□ -1.95
CAF120P53836 CRS5YOR031W 210 nt2.87□□□□□ -1.95
CAF120P53836 MAD1YGL086W 2250 nt2.87□□□□□ -1.95
CAF120P53836 UBP1YDL122W 2430 nt2.86□□□□□ -1.95
CAF120P53836 PMR1YGL167C 2853 nt2.86□□□□□ -1.95
CAF120P53836 STB4YMR019W 2850 nt2.86□□□□□ -1.95
CAF120P53836 GEA1YJR031C 4227 nt2.85□□□□□ -1.95
CAF120P53836 MNL2YLR057W 2550 nt2.85□□□□□ -1.95
CAF120P53836 MLH1YMR167W 2310 nt2.85□□□□□ -1.95
CAF120P53836 SNC1YAL030W 354 nt2.85□□□□□ -1.95
CAF120P53836 PAU8YAL068C 363 nt2.85□□□□□ -1.95
CAF120P53836 PAU18YLL064C 363 nt2.85□□□□□ -1.95
CAF120P53836 PAU6YNR076W 363 nt2.85□□□□□ -1.95
CAF120P53836 PAU20YOL161C 363 nt2.85□□□□□ -1.95
CAF120P53836 KAP120YPL125W 3099 nt2.85□□□□□ -1.95
CAF120P53836 KAP123YER110C 3342 nt2.85□□□□□ -1.95
CAF120P53836 SLN1YIL147C 3663 nt2.84□□□□□ -1.95
CAF120P53836 SEC1YDR164C 2175 nt2.84□□□□□ -1.95
CAF120P53836 NFT1YKR103W 3657 nt2.84□□□□□ -1.95
CAF120P53836 RIF1YBR275C 5751 nt2.84□□□□□ -1.95
CAF120P53836 KTI11YBL071W-A 249 nt2.84□□□□□ -1.95
CAF120P53836 SGS1YMR190C 4344 nt2.84□□□□□ -1.96
CAF120P53836 ASE1YOR058C 2658 nt2.83□□□□□ -1.96
CAF120P53836 YML002WYML002W 2214 nt2.83□□□□□ -1.96
CAF120P53836 RTT107YHR154W 3213 nt2.83□□□□□ -1.96
CAF120P53836 tW(CCA)G1tW(CCA)G1 72 nt2.83□□□□□ -1.96
CAF120P53836 tW(CCA)G2tW(CCA)G2 72 nt2.83□□□□□ -1.96
CAF120P53836 tW(CCA)JtW(CCA)J 72 nt2.83□□□□□ -1.96
CAF120P53836 tW(CCA)KtW(CCA)K 72 nt2.83□□□□□ -1.96
CAF120P53836 tW(CCA)MtW(CCA)M 72 nt2.83□□□□□ -1.96
CAF120P53836 tW(CCA)PtW(CCA)P 72 nt2.83□□□□□ -1.96
CAF120P53836 YPL150WYPL150W 2706 nt2.83□□□□□ -1.96
CAF120P53836 BFR2YDR299W 1605 nt2.82□□□□□ -1.96
CAF120P53836 RRP12YPL012W 3687 nt2.82□□□□□ -1.96
CAF120P53836 tM(CAU)Q2tM(CAU)Q2 78 nt2.82□□□□□ -1.96
CAF120P53836 BPT1YLL015W 4680 nt2.82□□□□□ -1.96
CAF120P53836 RTT10YPL183C 3042 nt2.82□□□□□ -1.96
CAF120P53836 YBT1YLL048C 4986 nt2.81□□□□□ -1.96
CAF120P53836 SPO22YIL073C 2928 nt2.81□□□□□ -1.96
CAF120P53836 YIL169CYIL169C 2988 nt2.81□□□□□ -1.96
CAF120P53836 ZRG8YER033C 3231 nt2.81□□□□□ -1.96
CAF120P53836 PRP6YBR055C 2700 nt2.81□□□□□ -1.96
CAF120P53836 FLO11YIR019C 4104 nt2.81□□□□□ -1.96
CAF120P53836 NEW1YPL226W 3591 nt2.8□□□□□ -1.96
CAF120P53836 DGR2YKL121W 2559 nt2.8□□□□□ -1.96
CAF120P53836 ORC3YLL004W 1851 nt2.8□□□□□ -1.96
CAF120P53836 YAL042C-AYAL042C-A 378 nt2.8□□□□□ -1.96
CAF120P53836 YLR149C-AYLR149C-A 87 nt2.8□□□□□ -1.96
CAF120P53836 CRM1YGR218W 3255 nt2.8□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 48.3 ms