Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeastyeast

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF16P43569 APL2YKL135C 2181 nt2.15□□□□□ -2.07
CAF16P43569 SSD1YDR293C 3753 nt2.14□□□□□ -2.07
CAF16P43569 MAD1YGL086W 2250 nt2.14□□□□□ -2.07
CAF16P43569 RPS27BYHR021C 249 nt2.14□□□□□ -2.07
CAF16P43569 RPL34BYIL052C 366 nt2.14□□□□□ -2.07
CAF16P43569 YPR092WYPR092W 306 nt2.14□□□□□ -2.07
CAF16P43569 DGR2YKL121W 2559 nt2.14□□□□□ -2.07
CAF16P43569 RAD34YDR314C 2079 nt2.14□□□□□ -2.07
CAF16P43569 RGA1YOR127W 3024 nt2.14□□□□□ -2.07
CAF16P43569 BUD2YKL092C 3315 nt2.14□□□□□ -2.07
CAF16P43569 USO1YDL058W 5373 nt2.13□□□□□ -2.07
CAF16P43569 YDR182W-AYDR182W-A 204 nt2.13□□□□□ -2.07
CAF16P43569 ATP7YKL016C 525 nt2.13□□□□□ -2.07
CAF16P43569 SEY1YOR165W 2331 nt2.13□□□□□ -2.07
CAF16P43569 PIG1YLR273C 1947 nt2.13□□□□□ -2.07
CAF16P43569 HIR3YJR140C 4947 nt2.12□□□□□ -2.07
CAF16P43569 IRC8YJL051W 2469 nt2.12□□□□□ -2.07
CAF16P43569 YOR225WYOR225W 330 nt2.12□□□□□ -2.07
CAF16P43569 YOR302WYOR302W 78 nt2.12□□□□□ -2.07
CAF16P43569 BNI1YNL271C 5862 nt2.12□□□□□ -2.07
CAF16P43569 FKS3YMR306W 5358 nt2.11□□□□□ -2.07
CAF16P43569 MSH6YDR097C 3729 nt2.11□□□□□ -2.07
CAF16P43569 SEC63YOR254C 1992 nt2.1□□□□□ -2.07
CAF16P43569 MYO4YAL029C 4416 nt2.1□□□□□ -2.07
CAF16P43569 AI5_ALPHAQ0070 1893 nt2.1□□□□□ -2.07
CAF16P43569 PAM16YJL104W 450 nt2.1□□□□□ -2.07
CAF16P43569 RRT15YLR162W-A 189 nt2.1□□□□□ -2.07
CAF16P43569 YOR011W-AYOR011W-A 207 nt2.09□□□□□ -2.07
CAF16P43569 YCL023CYCL023C 348 nt2.09□□□□□ -2.07
CAF16P43569 SPO75YLL005C 2607 nt2.09□□□□□ -2.08
CAF16P43569 STE11YLR362W 2154 nt2.09□□□□□ -2.08
CAF16P43569 YIL156W-BYIL156W-B 222 nt2.08□□□□□ -2.08
CAF16P43569 YIR044CYIR044C 186 nt2.08□□□□□ -2.08
CAF16P43569 RPS25BYLR333C 327 nt2.08□□□□□ -2.08
CAF16P43569 SEC5YDR166C 2916 nt2.08□□□□□ -2.08
CAF16P43569 NOC3YLR002C 1992 nt2.08□□□□□ -2.08
CAF16P43569 YNL144CYNL144C 2223 nt2.07□□□□□ -2.08
CAF16P43569 SCP160YJL080C 3669 nt2.06□□□□□ -2.08
CAF16P43569 ELG1YOR144C 2376 nt2.06□□□□□ -2.08
CAF16P43569 SPO21YOL091W 1830 nt2.06□□□□□ -2.08
CAF16P43569 snR74snR74 88 nt2.06□□□□□ -2.08
CAF16P43569 YJL120WYJL120W 324 nt2.06□□□□□ -2.08
CAF16P43569 YBR182C-AYBR182C-A 195 nt2.06□□□□□ -2.08
CAF16P43569 NAB6YML117W 3405 nt2.06□□□□□ -2.08
CAF16P43569 SEC16YPL085W 6588 nt2.06□□□□□ -2.08
CAF16P43569 SPP41YDR464W 4308 nt2.05□□□□□ -2.08
CAF16P43569 snR70snR70 164 nt2.05□□□□□ -2.08
CAF16P43569 VPS55YJR044C 423 nt2.05□□□□□ -2.08
CAF16P43569 MCM10YIL150C 1716 nt2.05□□□□□ -2.08
CAF16P43569 CUL3YGR003W 2235 nt2.05□□□□□ -2.08
CAF16P43569 RPL31AYDL075W 342 nt2.04□□□□□ -2.08
CAF16P43569 ATG9YDL149W 2994 nt2.04□□□□□ -2.08
CAF16P43569 SIR4YDR227W 4077 nt2.04□□□□□ -2.08
CAF16P43569 PDR8YLR266C 2106 nt2.04□□□□□ -2.08
CAF16P43569 YNL198CYNL198C 303 nt2.04□□□□□ -2.08
CAF16P43569 SGF11YPL047W 300 nt2.04□□□□□ -2.08
CAF16P43569 SFB2YNL049C 2631 nt2.04□□□□□ -2.08
CAF16P43569 YLL007CYLL007C 1998 nt2.03□□□□□ -2.08
CAF16P43569 YDL185C-AYDL185C-A 228 nt2.03□□□□□ -2.08
CAF16P43569 ISD11YER048W-A 285 nt2.03□□□□□ -2.08
CAF16P43569 YGL007C-AYGL007C-A 87 nt2.03□□□□□ -2.08
CAF16P43569 YMR175W-AYMR175W-A 195 nt2.03□□□□□ -2.08
CAF16P43569 MGA2YIR033W 3342 nt2.03□□□□□ -2.08
CAF16P43569 YMR045CYMR045C 5268 nt2.03□□□□□ -2.08
CAF16P43569 UTP21YLR409C 2820 nt2.03□□□□□ -2.09
CAF16P43569 DNA2YHR164C 4569 nt2.03□□□□□ -2.09
CAF16P43569 PTP2YOR208W 2253 nt2.02□□□□□ -2.09
CAF16P43569 Q0032Q0032 291 nt2.02□□□□□ -2.09
CAF16P43569 YBR174CYBR174C 315 nt2.02□□□□□ -2.09
CAF16P43569 SCD5YOR329C 2619 nt2.02□□□□□ -2.09
CAF16P43569 YKU70YMR284W 1809 nt2.01□□□□□ -2.09
CAF16P43569 ATG11YPR049C 3537 nt2.01□□□□□ -2.09
CAF16P43569 OLI1Q0130 231 nt2.01□□□□□ -2.09
CAF16P43569 YBL008W-AYBL008W-A 240 nt2.01□□□□□ -2.09
CAF16P43569 YFR016CYFR016C 3702 nt2.01□□□□□ -2.09
CAF16P43569 PDR11YIL013C 4236 nt2□□□□□ -2.09
CAF16P43569 tW(CCA)G1tW(CCA)G1 72 nt2□□□□□ -2.09
CAF16P43569 tW(CCA)G2tW(CCA)G2 72 nt2□□□□□ -2.09
CAF16P43569 tW(CCA)JtW(CCA)J 72 nt2□□□□□ -2.09
CAF16P43569 tW(CCA)KtW(CCA)K 72 nt2□□□□□ -2.09
CAF16P43569 tW(CCA)MtW(CCA)M 72 nt2□□□□□ -2.09
CAF16P43569 tW(CCA)PtW(CCA)P 72 nt2□□□□□ -2.09
CAF16P43569 YIR030W-AYIR030W-A 384 nt2□□□□□ -2.09
CAF16P43569 YOR376WYOR376W 369 nt2□□□□□ -2.09
CAF16P43569 TDA9YML081W 3756 nt2□□□□□ -2.09
CAF16P43569 HSL1YKL101W 4557 nt2□□□□□ -2.09
CAF16P43569 NUP170YBL079W 4509 nt1.99□□□□□ -2.09
CAF16P43569 SLI15YBR156C 2097 nt1.99□□□□□ -2.09
CAF16P43569 YEL014CYEL014C 306 nt1.99□□□□□ -2.09
CAF16P43569 BPH1YCR032W 6504 nt1.99□□□□□ -2.09
CAF16P43569 UBR2YLR024C 5619 nt1.99□□□□□ -2.09
CAF16P43569 PDR3YBL005W 2931 nt1.98□□□□□ -2.09
CAF16P43569 YJR039WYJR039W 3366 nt1.98□□□□□ -2.09
CAF16P43569 YJL182CYJL182C 318 nt1.97□□□□□ -2.09
CAF16P43569 YOR072W-BYOR072W-B 162 nt1.97□□□□□ -2.09
CAF16P43569 ALK1YGL021W 2283 nt1.97□□□□□ -2.09
CAF16P43569 COG4YPR105C 2586 nt1.97□□□□□ -2.09
CAF16P43569 PKH2YOL100W 3246 nt1.96□□□□□ -2.1
CAF16P43569 SLN1YIL147C 3663 nt1.96□□□□□ -2.1
CAF16P43569 SPO24YPR036W-A 204 nt1.96□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms