Protein–RNA interactions for Protein: P40092

SPI1, Uncharacterized cell wall protein SPI1, yeast

Predictions only

Length 148 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	P40092	YDR182W-A	YDR182W-A	204 nt		-0.92	□□□□□ -2.56
SPI1	P40092	LSO2	YGR169C-A	279 nt		-0.92	□□□□□ -2.56
SPI1	P40092	ECM9	YKR004C	1134 nt		-0.92	□□□□□ -2.56
SPI1	P40092	NPC2	YDL046W	522 nt		-0.94	□□□□□ -2.56
SPI1	P40092	YFR057W	YFR057W	456 nt		-0.94	□□□□□ -2.56
SPI1	P40092	MAM33	YIL070C	801 nt		-0.94	□□□□□ -2.56
SPI1	P40092	NFU1	YKL040C	771 nt		-0.94	□□□□□ -2.56
SPI1	P40092	YPL044C	YPL044C	549 nt		-0.94	□□□□□ -2.56
SPI1	P40092	YPL205C	YPL205C	345 nt		-0.94	□□□□□ -2.56
SPI1	P40092	YHL009W-B	YHL009W-B	5409 nt		-0.94	□□□□□ -2.56
SPI1	P40092	CDC33	YOL139C	642 nt		-0.95	□□□□□ -2.56
SPI1	P40092	YJR141W	YJR141W	1044 nt		-0.96	□□□□□ -2.56
SPI1	P40092	snR33	snR33	183 nt		-0.96	□□□□□ -2.56
SPI1	P40092	NIP1	YMR309C	2439 nt		-0.97	□□□□□ -2.56
SPI1	P40092	DIE2	YGR227W	1578 nt		-0.97	□□□□□ -2.56
SPI1	P40092	YEL010W	YEL010W	351 nt		-0.98	□□□□□ -2.57
SPI1	P40092	RMD6	YEL072W	696 nt		-0.99	□□□□□ -2.57
SPI1	P40092	snR36	snR36	182 nt		-0.99	□□□□□ -2.57
SPI1	P40092	COX5B	YIL111W	456 nt		-1	□□□□□ -2.57
SPI1	P40092	YER038W-A	YER038W-A	381 nt		-1.01	□□□□□ -2.57
SPI1	P40092	YHL048C-A	YHL048C-A	135 nt		-1.01	□□□□□ -2.57
SPI1	P40092	GIM5	YML094W	492 nt		-1.01	□□□□□ -2.57
SPI1	P40092	GPG1	YGL121C	381 nt		-1.02	□□□□□ -2.57
SPI1	P40092	MCM10	YIL150C	1716 nt		-1.02	□□□□□ -2.57
SPI1	P40092	GSP1	YLR293C	660 nt		-1.02	□□□□□ -2.57
SPI1	P40092	YPL060C-A	YPL060C-A	3315 nt		-1.02	□□□□□ -2.57
SPI1	P40092	YBR051W	YBR051W	351 nt		-1.02	□□□□□ -2.57
SPI1	P40092	HTB1	YDR224C	396 nt		-1.03	□□□□□ -2.57
SPI1	P40092	PRP21	YJL203W	843 nt		-1.03	□□□□□ -2.57
SPI1	P40092	YAL067W-A	YAL067W-A	228 nt		-1.03	□□□□□ -2.57
SPI1	P40092	AFB1	YLR040C	675 nt		-1.03	□□□□□ -2.57
SPI1	P40092	SMD2	YLR275W	333 nt		-1.03	□□□□□ -2.57
SPI1	P40092	YPR160W-A	YPR160W-A	81 nt		-1.03	□□□□□ -2.57
SPI1	P40092	ASE1	YOR058C	2658 nt		-1.04	□□□□□ -2.58
SPI1	P40092	TIM13	YGR181W	318 nt		-1.04	□□□□□ -2.58
SPI1	P40092	YKL115C	YKL115C	393 nt		-1.04	□□□□□ -2.58
SPI1	P40092	ARV1	YLR242C	966 nt		-1.04	□□□□□ -2.58
SPI1	P40092	YPR096C	YPR096C	303 nt		-1.04	□□□□□ -2.58
SPI1	P40092	NUP82	YJL061W	2142 nt		-1.05	□□□□□ -2.58
SPI1	P40092	YGR204C-A	YGR204C-A	114 nt		-1.06	□□□□□ -2.58
SPI1	P40092	YDL152W	YDL152W	366 nt		-1.07	□□□□□ -2.58
SPI1	P40092	YKL023C-A	YKL023C-A	228 nt		-1.07	□□□□□ -2.58
SPI1	P40092	YPL185W	YPL185W	396 nt		-1.07	□□□□□ -2.58
SPI1	P40092	YDL068W	YDL068W	330 nt		-1.08	□□□□□ -2.58
SPI1	P40092	YMR141W-A	YMR141W-A	225 nt		-1.09	□□□□□ -2.58
SPI1	P40092	TAH1	YCR060W	336 nt		-1.1	□□□□□ -2.59
SPI1	P40092	snR161	snR161	161 nt		-1.1	□□□□□ -2.59
SPI1	P40092	YBR121C-A	YBR121C-A	159 nt		-1.1	□□□□□ -2.59
SPI1	P40092	BI3	Q0115	1554 nt		-1.1	□□□□□ -2.59
SPI1	P40092	RPL29	YFR032C-A	180 nt		-1.12	□□□□□ -2.59
SPI1	P40092	YOR345C	YOR345C	351 nt		-1.12	□□□□□ -2.59
SPI1	P40092	YJL120W	YJL120W	324 nt		-1.13	□□□□□ -2.59
SPI1	P40092	YLR399W-A	YLR399W-A	105 nt		-1.13	□□□□□ -2.59
SPI1	P40092	YNL162W-A	YNL162W-A	219 nt		-1.13	□□□□□ -2.59
SPI1	P40092	YLL032C	YLL032C	2478 nt		-1.14	□□□□□ -2.59
SPI1	P40092	YCR038W-A	YCR038W-A	126 nt		-1.14	□□□□□ -2.59
SPI1	P40092	MMS21	YEL019C	804 nt		-1.14	□□□□□ -2.59
SPI1	P40092	YGL204C	YGL204C	306 nt		-1.14	□□□□□ -2.59
SPI1	P40092	YNL067W-B	YNL067W-B	141 nt		-1.14	□□□□□ -2.59
SPI1	P40092	TFB6	YOR352W	1032 nt		-1.14	□□□□□ -2.59
SPI1	P40092	TDA2	YER071C	381 nt		-1.15	□□□□□ -2.59
SPI1	P40092	YGR115C	YGR115C	780 nt		-1.15	□□□□□ -2.59
SPI1	P40092	MRPS8	YMR158W	468 nt		-1.15	□□□□□ -2.59
SPI1	P40092	COG6	YNL041C	2520 nt		-1.16	□□□□□ -2.59
SPI1	P40092	YDR008C	YDR008C	351 nt		-1.17	□□□□□ -2.6
SPI1	P40092	YBR223W-A	YBR223W-A	120 nt		-1.17	□□□□□ -2.6
SPI1	P40092	snR44	snR44	211 nt		-1.17	□□□□□ -2.6
SPI1	P40092	YMR158C-A	YMR158C-A	138 nt		-1.18	□□□□□ -2.6
SPI1	P40092	MFA2	YNL145W	117 nt		-1.2	□□□□□ -2.6
SPI1	P40092	IPP1	YBR011C	864 nt		-1.2	□□□□□ -2.6
SPI1	P40092	YFR012W-A	YFR012W-A	87 nt		-1.21	□□□□□ -2.6
SPI1	P40092	YJR079W	YJR079W	330 nt		-1.21	□□□□□ -2.6
SPI1	P40092	YMR075C-A	YMR075C-A	366 nt		-1.21	□□□□□ -2.6
SPI1	P40092	YOR248W	YOR248W	303 nt		-1.21	□□□□□ -2.6
SPI1	P40092	MRPL31	YKL138C	396 nt		-1.22	□□□□□ -2.6
SPI1	P40092	ATC1	YDR184C	885 nt		-1.23	□□□□□ -2.61
SPI1	P40092	YLR198C	YLR198C	360 nt		-1.23	□□□□□ -2.61
SPI1	P40092	YMR153C-A	YMR153C-A	336 nt		-1.23	□□□□□ -2.61
SPI1	P40092	YDL007C-A	YDL007C-A	258 nt		-1.24	□□□□□ -2.61
SPI1	P40092	YHR131W-A	YHR131W-A	246 nt		-1.24	□□□□□ -2.61
SPI1	P40092	YPL119C-A	YPL119C-A	264 nt		-1.24	□□□□□ -2.61
SPI1	P40092	YBR064W	YBR064W	429 nt		-1.24	□□□□□ -2.61
SPI1	P40092	EMC4	YGL231C	573 nt		-1.25	□□□□□ -2.61
SPI1	P40092	IRC2	YDR112W	309 nt		-1.26	□□□□□ -2.61
SPI1	P40092	RPS25B	YLR333C	327 nt		-1.26	□□□□□ -2.61
SPI1	P40092	YML007C-A	YML007C-A	111 nt		-1.26	□□□□□ -2.61
SPI1	P40092	GRX5	YPL059W	453 nt		-1.26	□□□□□ -2.61
SPI1	P40092	BI4	Q0120	1917 nt		-1.27	□□□□□ -2.61
SPI1	P40092	PAA1	YDR071C	576 nt		-1.27	□□□□□ -2.61
SPI1	P40092	YER076W-A	YER076W-A	348 nt		-1.27	□□□□□ -2.61
SPI1	P40092	YGL042C	YGL042C	306 nt		-1.27	□□□□□ -2.61
SPI1	P40092	YIL071W-A	YIL071W-A	477 nt		-1.27	□□□□□ -2.61
SPI1	P40092	SEM1	YDR363W-A	270 nt		-1.28	□□□□□ -2.61
SPI1	P40092	BLS1	YLR408C	369 nt		-1.28	□□□□□ -2.61
SPI1	P40092	YNL319W	YNL319W	441 nt		-1.28	□□□□□ -2.61
SPI1	P40092	YOR020W-A	YOR020W-A	273 nt		-1.28	□□□□□ -2.61
SPI1	P40092	UBS1	YBR165W	834 nt		-1.28	□□□□□ -2.61
SPI1	P40092	PAN3	YKL025C	2040 nt		-1.28	□□□□□ -2.62
SPI1	P40092	RUB1	YDR139C	234 nt		-1.29	□□□□□ -2.62
SPI1	P40092	RSM18	YER050C	417 nt		-1.29	□□□□□ -2.62

Retrieved 100 of 7,029 protein–RNA pairs in 60.3 ms