Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 INA22YIR024C 651 nt0.71□□□□□ -2.3
CUE1P38428 YPR153WYPR153W 423 nt0.71□□□□□ -2.3
CUE1P38428 YKL123WYKL123W 381 nt0.7□□□□□ -2.3
CUE1P38428 SLI15YBR156C 2097 nt0.69□□□□□ -2.3
CUE1P38428 NPC2YDL046W 522 nt0.69□□□□□ -2.3
CUE1P38428 SWF1YDR126W 1011 nt0.69□□□□□ -2.3
CUE1P38428 URM1YIL008W 300 nt0.69□□□□□ -2.3
CUE1P38428 TSC3YBR058C-A 243 nt0.69□□□□□ -2.3
CUE1P38428 RKR1YMR247C 4689 nt0.68□□□□□ -2.3
CUE1P38428 OST1YJL002C 1431 nt0.68□□□□□ -2.3
CUE1P38428 RPL9AYGL147C 576 nt0.67□□□□□ -2.3
CUE1P38428 YJR003CYJR003C 1560 nt0.66□□□□□ -2.3
CUE1P38428 SEC1YDR164C 2175 nt0.66□□□□□ -2.3
CUE1P38428 YGR042WYGR042W 816 nt0.66□□□□□ -2.3
CUE1P38428 YIL066W-AYIL066W-A 444 nt0.66□□□□□ -2.3
CUE1P38428 YCR001WYCR001W 315 nt0.65□□□□□ -2.31
CUE1P38428 BIG1YHR101C 1008 nt0.65□□□□□ -2.31
CUE1P38428 WAR1YML076C 2835 nt0.65□□□□□ -2.31
CUE1P38428 PAN2YGL094C 3348 nt0.65□□□□□ -2.31
CUE1P38428 YPL182CYPL182C 384 nt0.64□□□□□ -2.31
CUE1P38428 YMR160WYMR160W 2451 nt0.64□□□□□ -2.31
CUE1P38428 ZIP2YGL249W 2115 nt0.64□□□□□ -2.31
CUE1P38428 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
CUE1P38428 GEA2YEL022W 4380 nt0.62□□□□□ -2.31
CUE1P38428 NHP2YDL208W 471 nt0.62□□□□□ -2.31
CUE1P38428 tF(GAA)BtF(GAA)B 73 nt0.62□□□□□ -2.31
CUE1P38428 tF(GAA)FtF(GAA)F 73 nt0.62□□□□□ -2.31
CUE1P38428 tF(GAA)GtF(GAA)G 73 nt0.62□□□□□ -2.31
CUE1P38428 tF(GAA)H1tF(GAA)H1 73 nt0.62□□□□□ -2.31
CUE1P38428 tF(GAA)H2tF(GAA)H2 73 nt0.62□□□□□ -2.31
CUE1P38428 tF(GAA)MtF(GAA)M 73 nt0.62□□□□□ -2.31
CUE1P38428 tF(GAA)P1tF(GAA)P1 73 nt0.62□□□□□ -2.31
CUE1P38428 tF(GAA)P2tF(GAA)P2 73 nt0.62□□□□□ -2.31
CUE1P38428 YHL042WYHL042W 453 nt0.62□□□□□ -2.31
CUE1P38428 NFU1YKL040C 771 nt0.62□□□□□ -2.31
CUE1P38428 YMR141W-AYMR141W-A 225 nt0.62□□□□□ -2.31
CUE1P38428 GPI15YNL038W 690 nt0.62□□□□□ -2.31
CUE1P38428 LOA1YPR139C 903 nt0.62□□□□□ -2.31
CUE1P38428 EFR3YMR212C 2349 nt0.62□□□□□ -2.31
CUE1P38428 YDR521WYDR521W 336 nt0.61□□□□□ -2.31
CUE1P38428 ISD11YER048W-A 285 nt0.61□□□□□ -2.31
CUE1P38428 PAU12YGR294W 363 nt0.61□□□□□ -2.31
CUE1P38428 YJL135WYJL135W 318 nt0.61□□□□□ -2.31
CUE1P38428 YLR269CYLR269C 351 nt0.61□□□□□ -2.31
CUE1P38428 YOR072W-AYOR072W-A 249 nt0.61□□□□□ -2.31
CUE1P38428 DBP6YNR038W 1890 nt0.61□□□□□ -2.31
CUE1P38428 YER087C-AYER087C-A 552 nt0.6□□□□□ -2.31
CUE1P38428 ALG13YGL047W 609 nt0.6□□□□□ -2.31
CUE1P38428 CMC4YMR194C-B 222 nt0.6□□□□□ -2.31
CUE1P38428 YOR032W-AYOR032W-A 201 nt0.6□□□□□ -2.31
CUE1P38428 YOR108C-AYOR108C-A 210 nt0.6□□□□□ -2.31
CUE1P38428 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)HtT(AGU)H 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)I1tT(AGU)I1 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)I2tT(AGU)I2 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)JtT(AGU)J 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)N1tT(AGU)N1 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)N2tT(AGU)N2 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
CUE1P38428 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
CUE1P38428 YKL202WYKL202W 582 nt0.59□□□□□ -2.31
CUE1P38428 PBI2YNL015W 228 nt0.59□□□□□ -2.31
CUE1P38428 YBR076C-AYBR076C-A 267 nt0.59□□□□□ -2.31
CUE1P38428 YPR159C-AYPR159C-A 102 nt0.59□□□□□ -2.31
CUE1P38428 GPG1YGL121C 381 nt0.58□□□□□ -2.32
CUE1P38428 QCR9YGR183C 201 nt0.58□□□□□ -2.32
CUE1P38428 RPS27AYKL156W 249 nt0.58□□□□□ -2.32
CUE1P38428 YMR031W-AYMR031W-A 327 nt0.58□□□□□ -2.32
CUE1P38428 IES4YOR189W 351 nt0.58□□□□□ -2.32
CUE1P38428 BUD3YCL014W 4911 nt0.58□□□□□ -2.32
CUE1P38428 BFR2YDR299W 1605 nt0.57□□□□□ -2.32
CUE1P38428 WIP1YDR374W-A 270 nt0.57□□□□□ -2.32
CUE1P38428 TIM13YGR181W 318 nt0.57□□□□□ -2.32
CUE1P38428 RPF1YHR088W 888 nt0.57□□□□□ -2.32
CUE1P38428 EAF6YJR082C 342 nt0.57□□□□□ -2.32
CUE1P38428 YMR290W-AYMR290W-A 348 nt0.57□□□□□ -2.32
CUE1P38428 YER084W-AYER084W-A 513 nt0.56□□□□□ -2.32
CUE1P38428 YPL261CYPL261C 309 nt0.56□□□□□ -2.32
CUE1P38428 LTE1YAL024C 4308 nt0.56□□□□□ -2.32
CUE1P38428 STE18YJR086W 333 nt0.55□□□□□ -2.32
CUE1P38428 YOL160WYOL160W 342 nt0.55□□□□□ -2.32
CUE1P38428 YCK3YER123W 1575 nt0.54□□□□□ -2.32
CUE1P38428 PMP1YCR024C-A 123 nt0.54□□□□□ -2.32
CUE1P38428 YHR063W-AYHR063W-A 336 nt0.54□□□□□ -2.32
CUE1P38428 ULP2YIL031W 3105 nt0.54□□□□□ -2.32
CUE1P38428 EMC4YGL231C 573 nt0.53□□□□□ -2.32
CUE1P38428 ECM12YHR021W-A 456 nt0.53□□□□□ -2.32
CUE1P38428 RPL38YLR325C 237 nt0.53□□□□□ -2.32
CUE1P38428 YML108WYML108W 318 nt0.53□□□□□ -2.32
CUE1P38428 RPB10YOR210W 213 nt0.53□□□□□ -2.32
CUE1P38428 YOR282WYOR282W 321 nt0.53□□□□□ -2.32
CUE1P38428 RAD34YDR314C 2079 nt0.53□□□□□ -2.32
CUE1P38428 NOP9YJL010C 2001 nt0.52□□□□□ -2.33
CUE1P38428 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
CUE1P38428 PKH2YOL100W 3246 nt0.52□□□□□ -2.33
CUE1P38428 snR72snR72 98 nt0.52□□□□□ -2.33
CUE1P38428 YDL011CYDL011C 324 nt0.51□□□□□ -2.33
CUE1P38428 YHR125WYHR125W 306 nt0.51□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms