Protein–RNA interactions for Protein: P20486

CKS1, Cyclin-dependent kinases regulatory subunit, yeastyeast

Known RBP Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CKS1P20486 tT(AGU)JtT(AGU)J 73 nt0.55□□□□□ -2.32
CKS1P20486 tT(AGU)N1tT(AGU)N1 73 nt0.55□□□□□ -2.32
CKS1P20486 tT(AGU)N2tT(AGU)N2 73 nt0.55□□□□□ -2.32
CKS1P20486 tT(AGU)O1tT(AGU)O1 73 nt0.55□□□□□ -2.32
CKS1P20486 tT(AGU)O2tT(AGU)O2 73 nt0.55□□□□□ -2.32
CKS1P20486 YMR031W-AYMR031W-A 327 nt0.55□□□□□ -2.32
CKS1P20486 PRE4YFR050C 801 nt0.54□□□□□ -2.32
CKS1P20486 YJR003CYJR003C 1560 nt0.53□□□□□ -2.32
CKS1P20486 WAR1YML076C 2835 nt0.53□□□□□ -2.32
CKS1P20486 HMLALPHA2YCL067C 633 nt0.53□□□□□ -2.32
CKS1P20486 MATALPHA2YCR039C 633 nt0.53□□□□□ -2.32
CKS1P20486 COG4YPR105C 2586 nt0.53□□□□□ -2.32
CKS1P20486 YAR009CYAR009C 3591 nt0.53□□□□□ -2.32
CKS1P20486 LTE1YAL024C 4308 nt0.52□□□□□ -2.33
CKS1P20486 URM1YIL008W 300 nt0.52□□□□□ -2.33
CKS1P20486 PAN2YGL094C 3348 nt0.52□□□□□ -2.33
CKS1P20486 ALG13YGL047W 609 nt0.51□□□□□ -2.33
CKS1P20486 YHL042WYHL042W 453 nt0.51□□□□□ -2.33
CKS1P20486 YNL319WYNL319W 441 nt0.51□□□□□ -2.33
CKS1P20486 DBP6YNR038W 1890 nt0.51□□□□□ -2.33
CKS1P20486 BFR2YDR299W 1605 nt0.5□□□□□ -2.33
CKS1P20486 YDR029WYDR029W 315 nt0.5□□□□□ -2.33
CKS1P20486 ISD11YER048W-A 285 nt0.5□□□□□ -2.33
CKS1P20486 YIL066W-AYIL066W-A 444 nt0.5□□□□□ -2.33
CKS1P20486 YMR141W-AYMR141W-A 225 nt0.5□□□□□ -2.33
CKS1P20486 LOA1YPR139C 903 nt0.5□□□□□ -2.33
CKS1P20486 ZIP2YGL249W 2115 nt0.5□□□□□ -2.33
CKS1P20486 IES4YOR189W 351 nt0.49□□□□□ -2.33
CKS1P20486 TSC3YBR058C-A 243 nt0.49□□□□□ -2.33
CKS1P20486 YML002WYML002W 2214 nt0.48□□□□□ -2.33
CKS1P20486 YJL135WYJL135W 318 nt0.48□□□□□ -2.33
CKS1P20486 PAC1YOR269W 1485 nt0.48□□□□□ -2.33
CKS1P20486 UTP10YJL109C 5310 nt0.47□□□□□ -2.33
CKS1P20486 RTT102YGR275W 474 nt0.47□□□□□ -2.33
CKS1P20486 RPL38YLR325C 237 nt0.47□□□□□ -2.33
CKS1P20486 EFR3YMR212C 2349 nt0.46□□□□□ -2.34
CKS1P20486 YCR001WYCR001W 315 nt0.46□□□□□ -2.34
CKS1P20486 RPL9AYGL147C 576 nt0.46□□□□□ -2.34
CKS1P20486 ECM12YHR021W-A 456 nt0.46□□□□□ -2.34
CKS1P20486 NFU1YKL040C 771 nt0.46□□□□□ -2.34
CKS1P20486 YKL123WYKL123W 381 nt0.46□□□□□ -2.34
CKS1P20486 YPL182CYPL182C 384 nt0.46□□□□□ -2.34
CKS1P20486 GEA2YEL022W 4380 nt0.46□□□□□ -2.34
CKS1P20486 GPG1YGL121C 381 nt0.45□□□□□ -2.34
CKS1P20486 tR(UCU)Q1tR(UCU)Q1 73 nt0.45□□□□□ -2.34
CKS1P20486 YHR063W-AYHR063W-A 336 nt0.45□□□□□ -2.34
CKS1P20486 YOR108C-AYOR108C-A 210 nt0.45□□□□□ -2.34
CKS1P20486 PMP1YCR024C-A 123 nt0.44□□□□□ -2.34
CKS1P20486 BIG1YHR101C 1008 nt0.44□□□□□ -2.34
CKS1P20486 NOP9YJL010C 2001 nt0.43□□□□□ -2.34
CKS1P20486 YLL007CYLL007C 1998 nt0.43□□□□□ -2.34
CKS1P20486 YSP1YHR155W 3687 nt0.43□□□□□ -2.34
CKS1P20486 WIP1YDR374W-A 270 nt0.43□□□□□ -2.34
CKS1P20486 YIL142C-AYIL142C-A 333 nt0.43□□□□□ -2.34
CKS1P20486 YKL202WYKL202W 582 nt0.43□□□□□ -2.34
CKS1P20486 YLR269CYLR269C 351 nt0.43□□□□□ -2.34
CKS1P20486 YMR290W-AYMR290W-A 348 nt0.43□□□□□ -2.34
CKS1P20486 GPI15YNL038W 690 nt0.43□□□□□ -2.34
CKS1P20486 CHS6YJL099W 2241 nt0.42□□□□□ -2.34
CKS1P20486 YER087C-AYER087C-A 552 nt0.42□□□□□ -2.34
CKS1P20486 YOL160WYOL160W 342 nt0.42□□□□□ -2.34
CKS1P20486 YOR282WYOR282W 321 nt0.42□□□□□ -2.34
CKS1P20486 YPL261CYPL261C 309 nt0.42□□□□□ -2.34
CKS1P20486 YBR076C-AYBR076C-A 267 nt0.42□□□□□ -2.34
CKS1P20486 TIM13YGR181W 318 nt0.41□□□□□ -2.34
CKS1P20486 ANS1YHR126C 480 nt0.41□□□□□ -2.34
CKS1P20486 RPS27AYKL156W 249 nt0.41□□□□□ -2.34
CKS1P20486 snR72snR72 98 nt0.4□□□□□ -2.35
CKS1P20486 RPF1YHR088W 888 nt0.4□□□□□ -2.35
CKS1P20486 PAM16YJL104W 450 nt0.4□□□□□ -2.35
CKS1P20486 PKH2YOL100W 3246 nt0.4□□□□□ -2.35
CKS1P20486 RAD34YDR314C 2079 nt0.39□□□□□ -2.35
CKS1P20486 YBL008W-AYBL008W-A 240 nt0.39□□□□□ -2.35
CKS1P20486 RPB10YOR210W 213 nt0.39□□□□□ -2.35
CKS1P20486 YCK3YER123W 1575 nt0.38□□□□□ -2.35
CKS1P20486 YER084W-AYER084W-A 513 nt0.38□□□□□ -2.35
CKS1P20486 UBC7YMR022W 498 nt0.38□□□□□ -2.35
CKS1P20486 PBI2YNL015W 228 nt0.38□□□□□ -2.35
CKS1P20486 NPR2YEL062W 1848 nt0.37□□□□□ -2.35
CKS1P20486 YDR344CYDR344C 444 nt0.37□□□□□ -2.35
CKS1P20486 YBR064WYBR064W 429 nt0.36□□□□□ -2.35
CKS1P20486 YDL011CYDL011C 324 nt0.35□□□□□ -2.35
CKS1P20486 snR51snR51 107 nt0.35□□□□□ -2.35
CKS1P20486 EMC4YGL231C 573 nt0.34□□□□□ -2.36
CKS1P20486 YJL020W-AYJL020W-A 258 nt0.34□□□□□ -2.36
CKS1P20486 EAF6YJR082C 342 nt0.34□□□□□ -2.36
CKS1P20486 STE18YJR086W 333 nt0.34□□□□□ -2.36
CKS1P20486 YML108WYML108W 318 nt0.34□□□□□ -2.36
CKS1P20486 YBL071CYBL071C 309 nt0.34□□□□□ -2.36
CKS1P20486 CDC33YOL139C 642 nt0.34□□□□□ -2.36
CKS1P20486 ASE1YOR058C 2658 nt0.33□□□□□ -2.36
CKS1P20486 SDH7YDR511W 402 nt0.32□□□□□ -2.36
CKS1P20486 YIL134C-AYIL134C-A 204 nt0.32□□□□□ -2.36
CKS1P20486 YIR044CYIR044C 186 nt0.32□□□□□ -2.36
CKS1P20486 ABF2YMR072W 552 nt0.32□□□□□ -2.36
CKS1P20486 YOR192C-CYOR192C-C 237 nt0.32□□□□□ -2.36
CKS1P20486 YPL044CYPL044C 549 nt0.32□□□□□ -2.36
CKS1P20486 MCM10YIL150C 1716 nt0.32□□□□□ -2.36
CKS1P20486 YHR125WYHR125W 306 nt0.31□□□□□ -2.36
CKS1P20486 AIM29YKR074W 468 nt0.31□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 40.2 ms