Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 YDR341CYDR341C 1824 nt2.42□□□□□ -2.02
TY1A-ER1P0CX71 PET309YLR067C 2898 nt2.41□□□□□ -2.02
TY1A-ER1P0CX71 UBR1YGR184C 5853 nt2.41□□□□□ -2.02
TY1A-ER1P0CX71 TOP2YNL088W 4287 nt2.41□□□□□ -2.02
TY1A-ER1P0CX71 TRA1YHR099W 11235 nt2.41□□□□□ -2.02
TY1A-ER1P0CX71 MSH5YDL154W 2706 nt2.4□□□□□ -2.02
TY1A-ER1P0CX71 TRL1YJL087C 2484 nt2.4□□□□□ -2.03
TY1A-ER1P0CX71 YER053C-AYER053C-A 114 nt2.4□□□□□ -2.03
TY1A-ER1P0CX71 YIL174WYIL174W 228 nt2.4□□□□□ -2.03
TY1A-ER1P0CX71 YJL222W-AYJL222W-A 228 nt2.4□□□□□ -2.03
TY1A-ER1P0CX71 CTR9YOL145C 3234 nt2.4□□□□□ -2.03
TY1A-ER1P0CX71 SGM1YJR134C 2124 nt2.39□□□□□ -2.03
TY1A-ER1P0CX71 YIL071W-AYIL071W-A 477 nt2.39□□□□□ -2.03
TY1A-ER1P0CX71 RPS17AYML024W 411 nt2.39□□□□□ -2.03
TY1A-ER1P0CX71 ALK1YGL021W 2283 nt2.39□□□□□ -2.03
TY1A-ER1P0CX71 AGC1YPR021C 2709 nt2.39□□□□□ -2.03
TY1A-ER1P0CX71 SKP2YNL311C 2292 nt2.38□□□□□ -2.03
TY1A-ER1P0CX71 IRE1YHR079C 3348 nt2.38□□□□□ -2.03
TY1A-ER1P0CX71 AXL1YPR122W 3627 nt2.38□□□□□ -2.03
TY1A-ER1P0CX71 RSE1YML049C 4086 nt2.37□□□□□ -2.03
TY1A-ER1P0CX71 IFH1YLR223C 3258 nt2.37□□□□□ -2.03
TY1A-ER1P0CX71 RPS30BYOR182C 192 nt2.37□□□□□ -2.03
TY1A-ER1P0CX71 YIL082W-AYIL082W-A 4497 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 PKH2YOL100W 3246 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YCR038W-AYCR038W-A 126 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YDR521WYDR521W 336 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YIL134C-AYIL134C-A 204 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YBR099CYBR099C 384 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YDR098C-BYDR098C-B 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YDR210C-DYDR210C-D 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YDR316W-BYDR316W-B 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YDR365W-BYDR365W-B 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YER138CYER138C 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YER160CYER160C 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YGR038C-BYGR038C-B 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YGR161C-DYGR161C-D 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YJR027WYJR027W 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YLR157C-BYLR157C-B 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YML039WYML039W 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YML045WYML045W 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YMR050CYMR050C 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YOL103W-BYOL103W-B 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YBR012W-BYBR012W-B 5271 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YOR142W-BYOR142W-B 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YPL257W-BYPL257W-B 5268 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 YPR158W-BYPR158W-B 5271 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 SYH1YPL105C 2550 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 MSB2YGR014W 3921 nt2.36□□□□□ -2.03
TY1A-ER1P0CX71 RPA190YOR341W 4995 nt2.35□□□□□ -2.03
TY1A-ER1P0CX71 YDR354C-AYDR354C-A 144 nt2.35□□□□□ -2.03
TY1A-ER1P0CX71 PMP2YEL017C-A 132 nt2.35□□□□□ -2.03
TY1A-ER1P0CX71 COX12YLR038C 252 nt2.34□□□□□ -2.03
TY1A-ER1P0CX71 FRK1YPL141C 2598 nt2.34□□□□□ -2.04
TY1A-ER1P0CX71 MLH1YMR167W 2310 nt2.34□□□□□ -2.04
TY1A-ER1P0CX71 KRE33YNL132W 3171 nt2.33□□□□□ -2.04
TY1A-ER1P0CX71 YKR075W-AYKR075W-A 270 nt2.33□□□□□ -2.04
TY1A-ER1P0CX71 GIP3YPL137C 3831 nt2.33□□□□□ -2.04
TY1A-ER1P0CX71 ESL2YKR096W 3588 nt2.32□□□□□ -2.04
TY1A-ER1P0CX71 RPL37BYDR500C 267 nt2.32□□□□□ -2.04
TY1A-ER1P0CX71 YHR217CYHR217C 462 nt2.32□□□□□ -2.04
TY1A-ER1P0CX71 PRP5YBR237W 2550 nt2.32□□□□□ -2.04
TY1A-ER1P0CX71 STE6YKL209C 3873 nt2.32□□□□□ -2.04
TY1A-ER1P0CX71 AKR1YDR264C 2295 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 YIL169CYIL169C 2988 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 UBP15YMR304W 3693 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 TTI1YKL033W 3117 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 SCP160YJL080C 3669 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 SLI15YBR156C 2097 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 YCR095W-AYCR095W-A 159 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 YDL247W-AYDL247W-A 75 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 PAA1YDR071C 576 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 APL1YJR005W 2103 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 YMR175W-AYMR175W-A 195 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 YNL103W-AYNL103W-A 90 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 YBR206WYBR206W 324 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 RTT107YHR154W 3213 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 UBP1YDL122W 2430 nt2.31□□□□□ -2.04
TY1A-ER1P0CX71 RTT101YJL047C 2529 nt2.3□□□□□ -2.04
TY1A-ER1P0CX71 COG4YPR105C 2586 nt2.3□□□□□ -2.04
TY1A-ER1P0CX71 SSD1YDR293C 3753 nt2.3□□□□□ -2.04
TY1A-ER1P0CX71 CMC4YMR194C-B 222 nt2.3□□□□□ -2.04
TY1A-ER1P0CX71 YOR073W-AYOR073W-A 234 nt2.3□□□□□ -2.04
TY1A-ER1P0CX71 YOR019WYOR019W 2193 nt2.3□□□□□ -2.04
TY1A-ER1P0CX71 NUM1YDR150W 8247 nt2.3□□□□□ -2.04
TY1A-ER1P0CX71 YFR012W-AYFR012W-A 87 nt2.29□□□□□ -2.04
TY1A-ER1P0CX71 NEW1YPL226W 3591 nt2.28□□□□□ -2.04
TY1A-ER1P0CX71 RAV1YJR033C 4074 nt2.28□□□□□ -2.04
TY1A-ER1P0CX71 YIL002W-AYIL002W-A 210 nt2.28□□□□□ -2.04
TY1A-ER1P0CX71 YJL026C-AYJL026C-A 222 nt2.28□□□□□ -2.04
TY1A-ER1P0CX71 YCR087C-AYCR087C-A 462 nt2.27□□□□□ -2.05
TY1A-ER1P0CX71 YMR122W-AYMR122W-A 255 nt2.27□□□□□ -2.05
TY1A-ER1P0CX71 YNL211CYNL211C 261 nt2.27□□□□□ -2.05
TY1A-ER1P0CX71 CHC1YGL206C 4962 nt2.27□□□□□ -2.05
TY1A-ER1P0CX71 PSD2YGR170W 3417 nt2.27□□□□□ -2.05
TY1A-ER1P0CX71 tL(UAA)QtL(UAA)Q 85 nt2.26□□□□□ -2.05
TY1A-ER1P0CX71 CDC31YOR257W 486 nt2.26□□□□□ -2.05
TY1A-ER1P0CX71 RPL33AYPL143W 324 nt2.26□□□□□ -2.05
TY1A-ER1P0CX71 ADR1YDR216W 3972 nt2.26□□□□□ -2.05
TY1A-ER1P0CX71 YEF3YLR249W 3135 nt2.25□□□□□ -2.05
TY1A-ER1P0CX71 YNL144CYNL144C 2223 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 19.8 ms