Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 BFR2YDR299W 1605 nt3.01□□□□□ -1.93
TY1A-PR2P0CX60 BUB1YGR188C 3066 nt3.01□□□□□ -1.93
TY1A-PR2P0CX60 FIR1YER032W 2631 nt3.01□□□□□ -1.93
TY1A-PR2P0CX60 PKH2YOL100W 3246 nt3□□□□□ -1.93
TY1A-PR2P0CX60 UBP15YMR304W 3693 nt3□□□□□ -1.93
TY1A-PR2P0CX60 BUD4YJR092W 4344 nt3□□□□□ -1.93
TY1A-PR2P0CX60 LOS1YKL205W 3303 nt3□□□□□ -1.93
TY1A-PR2P0CX60 BIR1YJR089W 2865 nt3□□□□□ -1.93
TY1A-PR2P0CX60 RPL37BYDR500C 267 nt3□□□□□ -1.93
TY1A-PR2P0CX60 COX5BYIL111W 456 nt3□□□□□ -1.93
TY1A-PR2P0CX60 YKL100W-AYKL100W-A 90 nt3□□□□□ -1.93
TY1A-PR2P0CX60 MLH3YPL164C 2148 nt3□□□□□ -1.93
TY1A-PR2P0CX60 YBT1YLL048C 4986 nt2.99□□□□□ -1.93
TY1A-PR2P0CX60 POL2YNL262W 6669 nt2.99□□□□□ -1.93
TY1A-PR2P0CX60 TFC4YGR047C 3078 nt2.98□□□□□ -1.93
TY1A-PR2P0CX60 YGL123C-AYGL123C-A 231 nt2.98□□□□□ -1.93
TY1A-PR2P0CX60 YBL071C-BYBL071C-B 99 nt2.98□□□□□ -1.93
TY1A-PR2P0CX60 TAH1YCR060W 336 nt2.97□□□□□ -1.93
TY1A-PR2P0CX60 NFT1YKR103W 3657 nt2.97□□□□□ -1.93
TY1A-PR2P0CX60 CSR2YPR030W 3366 nt2.97□□□□□ -1.93
TY1A-PR2P0CX60 VAS1YGR094W 3315 nt2.97□□□□□ -1.93
TY1A-PR2P0CX60 BUD2YKL092C 3315 nt2.97□□□□□ -1.93
TY1A-PR2P0CX60 YJL127W-AYJL127W-A 117 nt2.96□□□□□ -1.94
TY1A-PR2P0CX60 COG4YPR105C 2586 nt2.96□□□□□ -1.94
TY1A-PR2P0CX60 RDS1YCR106W 2499 nt2.95□□□□□ -1.94
TY1A-PR2P0CX60 YAL042C-AYAL042C-A 378 nt2.94□□□□□ -1.94
TY1A-PR2P0CX60 KAP120YPL125W 3099 nt2.94□□□□□ -1.94
TY1A-PR2P0CX60 AUS1YOR011W 4185 nt2.93□□□□□ -1.94
TY1A-PR2P0CX60 MRD1YPR112C 2664 nt2.93□□□□□ -1.94
TY1A-PR2P0CX60 SEC1YDR164C 2175 nt2.93□□□□□ -1.94
TY1A-PR2P0CX60 YGR240C-AYGR240C-A 201 nt2.93□□□□□ -1.94
TY1A-PR2P0CX60 SPO71YDR104C 3738 nt2.93□□□□□ -1.94
TY1A-PR2P0CX60 GCN1YGL195W 8019 nt2.93□□□□□ -1.94
TY1A-PR2P0CX60 LRG1YDL240W 3054 nt2.93□□□□□ -1.94
TY1A-PR2P0CX60 YGR109W-BYGR109W-B 4644 nt2.92□□□□□ -1.94
TY1A-PR2P0CX60 PAU11YGL261C 363 nt2.92□□□□□ -1.94
TY1A-PR2P0CX60 YMR175W-AYMR175W-A 195 nt2.92□□□□□ -1.94
TY1A-PR2P0CX60 YDL206WYDL206W 2289 nt2.92□□□□□ -1.94
TY1A-PR2P0CX60 POL3YDL102W 3294 nt2.91□□□□□ -1.94
TY1A-PR2P0CX60 YOL164W-AYOL164W-A 183 nt2.91□□□□□ -1.94
TY1A-PR2P0CX60 IST2YBR086C 2841 nt2.9□□□□□ -1.94
TY1A-PR2P0CX60 JSN1YJR091C 3276 nt2.9□□□□□ -1.95
TY1A-PR2P0CX60 MDN1YLR106C 14733 nt2.9□□□□□ -1.95
TY1A-PR2P0CX60 INP51YIL002C 2841 nt2.9□□□□□ -1.95
TY1A-PR2P0CX60 FRK1YPL141C 2598 nt2.89□□□□□ -1.95
TY1A-PR2P0CX60 UFD2YDL190C 2886 nt2.89□□□□□ -1.95
TY1A-PR2P0CX60 CBF2YGR140W 2871 nt2.89□□□□□ -1.95
TY1A-PR2P0CX60 TBS1YBR150C 3285 nt2.89□□□□□ -1.95
TY1A-PR2P0CX60 STU2YLR045C 2667 nt2.89□□□□□ -1.95
TY1A-PR2P0CX60 SSN2YDR443C 4263 nt2.89□□□□□ -1.95
TY1A-PR2P0CX60 FLO5YHR211W 3228 nt2.88□□□□□ -1.95
TY1A-PR2P0CX60 SLI15YBR156C 2097 nt2.88□□□□□ -1.95
TY1A-PR2P0CX60 ARO1YDR127W 4767 nt2.88□□□□□ -1.95
TY1A-PR2P0CX60 RPS28BYLR264W 204 nt2.88□□□□□ -1.95
TY1A-PR2P0CX60 SCP160YJL080C 3669 nt2.88□□□□□ -1.95
TY1A-PR2P0CX60 COG6YNL041C 2520 nt2.88□□□□□ -1.95
TY1A-PR2P0CX60 SEC26YDR238C 2922 nt2.87□□□□□ -1.95
TY1A-PR2P0CX60 YLR364C-AYLR364C-A 123 nt2.87□□□□□ -1.95
TY1A-PR2P0CX60 RSM22YKL155C 1887 nt2.87□□□□□ -1.95
TY1A-PR2P0CX60 TAO3YIL129C 7131 nt2.87□□□□□ -1.95
TY1A-PR2P0CX60 CAF120YNL278W 3183 nt2.86□□□□□ -1.95
TY1A-PR2P0CX60 ADR1YDR216W 3972 nt2.86□□□□□ -1.95
TY1A-PR2P0CX60 SNQ2YDR011W 4506 nt2.86□□□□□ -1.95
TY1A-PR2P0CX60 STT4YLR305C 5703 nt2.85□□□□□ -1.95
TY1A-PR2P0CX60 YDR210WYDR210W 228 nt2.85□□□□□ -1.95
TY1A-PR2P0CX60 snR50snR50 90 nt2.85□□□□□ -1.95
TY1A-PR2P0CX60 SGM1YJR134C 2124 nt2.84□□□□□ -1.95
TY1A-PR2P0CX60 snR64snR64 101 nt2.84□□□□□ -1.95
TY1A-PR2P0CX60 RTT107YHR154W 3213 nt2.84□□□□□ -1.96
TY1A-PR2P0CX60 MSH5YDL154W 2706 nt2.84□□□□□ -1.96
TY1A-PR2P0CX60 SIN3YOL004W 4611 nt2.83□□□□□ -1.96
TY1A-PR2P0CX60 EAF1YDR359C 2949 nt2.83□□□□□ -1.96
TY1A-PR2P0CX60 YGR146C-AYGR146C-A 162 nt2.83□□□□□ -1.96
TY1A-PR2P0CX60 YBR109W-AYBR109W-A 225 nt2.83□□□□□ -1.96
TY1A-PR2P0CX60 FYV10YIL097W 1551 nt2.83□□□□□ -1.96
TY1A-PR2P0CX60 YSP2YDR326C 4317 nt2.82□□□□□ -1.96
TY1A-PR2P0CX60 CIN8YEL061C 3003 nt2.82□□□□□ -1.96
TY1A-PR2P0CX60 SAP185YJL098W 3177 nt2.82□□□□□ -1.96
TY1A-PR2P0CX60 AGC1YPR021C 2709 nt2.82□□□□□ -1.96
TY1A-PR2P0CX60 RPS26AYGL189C 360 nt2.82□□□□□ -1.96
TY1A-PR2P0CX60 YHR032C-AYHR032C-A 120 nt2.82□□□□□ -1.96
TY1A-PR2P0CX60 VPS8YAL002W 3825 nt2.82□□□□□ -1.96
TY1A-PR2P0CX60 NUP100YKL068W 2880 nt2.81□□□□□ -1.96
TY1A-PR2P0CX60 YOR161W-AYOR161W-A 81 nt2.81□□□□□ -1.96
TY1A-PR2P0CX60 YLR278CYLR278C 4026 nt2.8□□□□□ -1.96
TY1A-PR2P0CX60 AMS1YGL156W 3252 nt2.8□□□□□ -1.96
TY1A-PR2P0CX60 YBR196C-AYBR196C-A 150 nt2.79□□□□□ -1.96
TY1A-PR2P0CX60 ESL1YIL151C 3357 nt2.79□□□□□ -1.96
TY1A-PR2P0CX60 MDM1YML104C 3384 nt2.78□□□□□ -1.96
TY1A-PR2P0CX60 SLA1YBL007C 3735 nt2.78□□□□□ -1.96
TY1A-PR2P0CX60 CDC60YPL160W 3273 nt2.78□□□□□ -1.96
TY1A-PR2P0CX60 YML002WYML002W 2214 nt2.77□□□□□ -1.97
TY1A-PR2P0CX60 COX19YLL018C-A 297 nt2.77□□□□□ -1.97
TY1A-PR2P0CX60 snR47snR47 99 nt2.77□□□□□ -1.97
TY1A-PR2P0CX60 RTP1YMR185W 2946 nt2.77□□□□□ -1.97
TY1A-PR2P0CX60 CTR9YOL145C 3234 nt2.76□□□□□ -1.97
TY1A-PR2P0CX60 GCN2YDR283C 4980 nt2.76□□□□□ -1.97
TY1A-PR2P0CX60 RAX2YLR084C 3663 nt2.76□□□□□ -1.97
TY1A-PR2P0CX60 FLO11YIR019C 4104 nt2.76□□□□□ -1.97
TY1A-PR2P0CX60 YKL162C-AYKL162C-A 153 nt2.76□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 35.8 ms