Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 AL391422.3-201ENST00000603791 2761 ntBASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRGV1A0A0A0MS02 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 PCDHAC2-203ENST00000615316 3011 ntBASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 AC007322.1-201ENST00000426983 750 ntBASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 DUX4L16-201ENST00000555130 1264 ntBASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 AL162412.1-201ENST00000567129 965 ntBASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 AC016405.3-201ENST00000607710 860 ntBASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRGV1A0A0A0MS02 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TRGV1A0A0A0MS02 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRGV1A0A0A0MS02 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRGV1A0A0A0MS02 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRGV1A0A0A0MS02 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRGV1A0A0A0MS02 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.58□□□□□ -0.07
TRGV1A0A0A0MS02 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 AC069236.1-201ENST00000604339 616 ntBASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 AC231657.2-201ENST00000624556 255 ntBASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 AL512408.1-201ENST00000569378 2000 ntBASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 KRT8P36-201ENST00000489121 1440 ntBASIC14.58□□□□□ -0.08
TRGV1A0A0A0MS02 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms