Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 ARP7YPR034W 1434 nt1.95□□□□□ -2.1
SEF1P34228 YCR087C-AYCR087C-A 462 nt1.95□□□□□ -2.1
SEF1P34228 CGI121YML036W 546 nt1.95□□□□□ -2.1
SEF1P34228 RPL9BYNL067W 576 nt1.95□□□□□ -2.1
SEF1P34228 PET309YLR067C 2898 nt1.95□□□□□ -2.1
SEF1P34228 INO80YGL150C 4470 nt1.95□□□□□ -2.1
SEF1P34228 YDR008CYDR008C 351 nt1.94□□□□□ -2.1
SEF1P34228 RTR1YER139C 681 nt1.94□□□□□ -2.1
SEF1P34228 RPA34YJL148W 702 nt1.94□□□□□ -2.1
SEF1P34228 YOR029WYOR029W 336 nt1.94□□□□□ -2.1
SEF1P34228 YOR121CYOR121C 306 nt1.94□□□□□ -2.1
SEF1P34228 KOG1YHR186C 4674 nt1.94□□□□□ -2.1
SEF1P34228 YER137W-AYER137W-A 306 nt1.93□□□□□ -2.1
SEF1P34228 YJL052C-AYJL052C-A 120 nt1.93□□□□□ -2.1
SEF1P34228 HIT1YJR055W 495 nt1.93□□□□□ -2.1
SEF1P34228 YKL183C-AYKL183C-A 213 nt1.93□□□□□ -2.1
SEF1P34228 RPL32YBL092W 393 nt1.93□□□□□ -2.1
SEF1P34228 CFT2YLR115W 2580 nt1.93□□□□□ -2.1
SEF1P34228 PEX8YGR077C 1770 nt1.93□□□□□ -2.1
SEF1P34228 NEO1YIL048W 3456 nt1.92□□□□□ -2.1
SEF1P34228 RPL42BYHR141C 321 nt1.92□□□□□ -2.1
SEF1P34228 YNL114CYNL114C 372 nt1.92□□□□□ -2.1
SEF1P34228 RPL42AYNL162W 321 nt1.92□□□□□ -2.1
SEF1P34228 SPP41YDR464W 4308 nt1.91□□□□□ -2.1
SEF1P34228 GYP5YPL249C 2685 nt1.91□□□□□ -2.1
SEF1P34228 HCS1YKL017C 2052 nt1.91□□□□□ -2.1
SEF1P34228 YCR102W-AYCR102W-A 198 nt1.91□□□□□ -2.1
SEF1P34228 TIM13YGR181W 318 nt1.91□□□□□ -2.1
SEF1P34228 YJL020W-AYJL020W-A 258 nt1.91□□□□□ -2.1
SEF1P34228 YML003WYML003W 873 nt1.91□□□□□ -2.1
SEF1P34228 AGC1YPR021C 2709 nt1.91□□□□□ -2.1
SEF1P34228 YER088C-AYER088C-A 324 nt1.9□□□□□ -2.11
SEF1P34228 YNL058CYNL058C 951 nt1.9□□□□□ -2.11
SEF1P34228 BRE1YDL074C 2103 nt1.89□□□□□ -2.11
SEF1P34228 RPL26AYLR344W 384 nt1.89□□□□□ -2.11
SEF1P34228 ISF1YMR081C 1017 nt1.89□□□□□ -2.11
SEF1P34228 YOR343W-BYOR343W-B 5313 nt1.88□□□□□ -2.11
SEF1P34228 PCF11YDR228C 1881 nt1.88□□□□□ -2.11
SEF1P34228 AIM9YER080W 1884 nt1.88□□□□□ -2.11
SEF1P34228 PHS1YJL097W 654 nt1.88□□□□□ -2.11
SEF1P34228 TMA7YLR262C-A 195 nt1.88□□□□□ -2.11
SEF1P34228 YJR098CYJR098C 1971 nt1.87□□□□□ -2.11
SEF1P34228 RPS20YHL015W 366 nt1.87□□□□□ -2.11
SEF1P34228 HCH1YNL281W 462 nt1.87□□□□□ -2.11
SEF1P34228 MF(ALPHA)1YPL187W 498 nt1.87□□□□□ -2.11
SEF1P34228 GCN2YDR283C 4980 nt1.87□□□□□ -2.11
SEF1P34228 MYO2YOR326W 4725 nt1.87□□□□□ -2.11
SEF1P34228 VPS34YLR240W 2628 nt1.87□□□□□ -2.11
SEF1P34228 DFG16YOR030W 1860 nt1.86□□□□□ -2.11
SEF1P34228 RPS27AYKL156W 249 nt1.86□□□□□ -2.11
SEF1P34228 YBL073WYBL073W 312 nt1.86□□□□□ -2.11
SEF1P34228 TDA9YML081W 3756 nt1.86□□□□□ -2.11
SEF1P34228 UBR2YLR024C 5619 nt1.86□□□□□ -2.11
SEF1P34228 FKS1YLR342W 5631 nt1.85□□□□□ -2.11
SEF1P34228 YHR073W-AYHR073W-A 177 nt1.85□□□□□ -2.11
SEF1P34228 ABM1YJR108W 372 nt1.85□□□□□ -2.11
SEF1P34228 MCM22YJR135C 720 nt1.85□□□□□ -2.11
SEF1P34228 PAU18YLL064C 363 nt1.85□□□□□ -2.11
SEF1P34228 DGR1YNL130C-A 147 nt1.85□□□□□ -2.11
SEF1P34228 PAU6YNR076W 363 nt1.85□□□□□ -2.11
SEF1P34228 HHT1YBR010W 411 nt1.85□□□□□ -2.11
SEF1P34228 YPL229WYPL229W 621 nt1.85□□□□□ -2.11
SEF1P34228 OSH6YKR003W 1347 nt1.85□□□□□ -2.11
SEF1P34228 YJR003CYJR003C 1560 nt1.85□□□□□ -2.11
SEF1P34228 FIG2YCR089W 4830 nt1.84□□□□□ -2.11
SEF1P34228 TBS1YBR150C 3285 nt1.84□□□□□ -2.11
SEF1P34228 YDL118WYDL118W 381 nt1.84□□□□□ -2.11
SEF1P34228 YGR035CYGR035C 351 nt1.84□□□□□ -2.11
SEF1P34228 YKL083WYKL083W 615 nt1.84□□□□□ -2.11
SEF1P34228 TFC8YPL007C 1767 nt1.84□□□□□ -2.12
SEF1P34228 MSC6YOR354C 2079 nt1.84□□□□□ -2.12
SEF1P34228 HDA3YPR179C 1968 nt1.83□□□□□ -2.12
SEF1P34228 HIR3YJR140C 4947 nt1.83□□□□□ -2.12
SEF1P34228 YAL063C-AYAL063C-A 291 nt1.83□□□□□ -2.12
SEF1P34228 YLR146W-AYLR146W-A 189 nt1.83□□□□□ -2.12
SEF1P34228 FMP23YBR047W 528 nt1.83□□□□□ -2.12
SEF1P34228 YPR197CYPR197C 564 nt1.83□□□□□ -2.12
SEF1P34228 PXA2YKL188C 2562 nt1.83□□□□□ -2.12
SEF1P34228 SEC63YOR254C 1992 nt1.83□□□□□ -2.12
SEF1P34228 YGR250CYGR250C 2346 nt1.82□□□□□ -2.12
SEF1P34228 UFD4YKL010C 4452 nt1.82□□□□□ -2.12
SEF1P34228 YGR174W-AYGR174W-A 87 nt1.82□□□□□ -2.12
SEF1P34228 YCL046WYCL046W 324 nt1.82□□□□□ -2.12
SEF1P34228 SWI5YDR146C 2130 nt1.82□□□□□ -2.12
SEF1P34228 SEC31YDL195W 3822 nt1.82□□□□□ -2.12
SEF1P34228 HSH155YMR288W 2916 nt1.81□□□□□ -2.12
SEF1P34228 YGR265WYGR265W 411 nt1.81□□□□□ -2.12
SEF1P34228 YOR093CYOR093C 4947 nt1.81□□□□□ -2.12
SEF1P34228 MYO4YAL029C 4416 nt1.81□□□□□ -2.12
SEF1P34228 SEY1YOR165W 2331 nt1.8□□□□□ -2.12
SEF1P34228 ZRG17YNR039C 1818 nt1.8□□□□□ -2.12
SEF1P34228 FAB1YFR019W 6837 nt1.8□□□□□ -2.12
SEF1P34228 DNF3YMR162C 4971 nt1.8□□□□□ -2.12
SEF1P34228 NOP53YPL146C 1368 nt1.8□□□□□ -2.12
SEF1P34228 YMR045CYMR045C 5268 nt1.8□□□□□ -2.12
SEF1P34228 YJR039WYJR039W 3366 nt1.8□□□□□ -2.12
SEF1P34228 YPL225WYPL225W 441 nt1.79□□□□□ -2.12
SEF1P34228 CTR9YOL145C 3234 nt1.79□□□□□ -2.12
SEF1P34228 MSH5YDL154W 2706 nt1.78□□□□□ -2.12
SEF1P34228 SAC3YDR159W 3906 nt1.78□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms