Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
PABPC1P11940 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PABPC1P11940 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PABPC1P11940 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PABPC1P11940 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.7■□□□□ 0.9
PABPC1P11940 PLK5-205ENST00000642079 1969 ntBASIC20.7■□□□□ 0.9
PABPC1P11940 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PABPC1P11940 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PABPC1P11940 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PABPC1P11940 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.69■□□□□ 0.9
PABPC1P11940 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.69■□□□□ 0.9
PABPC1P11940 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 AL158047.1-201ENST00000445918 881 ntBASIC20.69■□□□□ 0.9
PABPC1P11940 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.69■□□□□ 0.9
PABPC1P11940 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.69■□□□□ 0.9
PABPC1P11940 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PABPC1P11940 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PABPC1P11940 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.69■□□□□ 0.9
PABPC1P11940 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.69■□□□□ 0.9
PABPC1P11940 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PABPC1P11940 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PABPC1P11940 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PABPC1P11940 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.68■□□□□ 0.9
PABPC1P11940 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PABPC1P11940 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PABPC1P11940 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PABPC1P11940 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PABPC1P11940 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PABPC1P11940 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PABPC1P11940 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.68■□□□□ 0.9
PABPC1P11940 POM121L13P-201ENST00000422362 380 ntBASIC20.68■□□□□ 0.9
PABPC1P11940 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.68■□□□□ 0.9
PABPC1P11940 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PABPC1P11940 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.68■□□□□ 0.9
PABPC1P11940 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.68■□□□□ 0.9
PABPC1P11940 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PABPC1P11940 AC006557.6-201ENST00000623071 864 ntBASIC20.68■□□□□ 0.9
PABPC1P11940 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PABPC1P11940 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
PABPC1P11940 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.68■□□□□ 0.9
PABPC1P11940 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.68■□□□□ 0.9
PABPC1P11940 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PABPC1P11940 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.67■□□□□ 0.9
PABPC1P11940 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PABPC1P11940 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PABPC1P11940 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PABPC1P11940 AL390719.1-204ENST00000412397 1219 ntBASIC20.67■□□□□ 0.9
PABPC1P11940 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PABPC1P11940 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.67■□□□□ 0.9
PABPC1P11940 AC233263.1-201ENST00000578059 224 ntBASIC20.67■□□□□ 0.9
PABPC1P11940 AC069544.1-201ENST00000609399 999 ntBASIC20.67■□□□□ 0.9
PABPC1P11940 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.67■□□□□ 0.9
PABPC1P11940 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PABPC1P11940 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PABPC1P11940 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.67■□□□□ 0.9
PABPC1P11940 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PABPC1P11940 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.67■□□□□ 0.9
PABPC1P11940 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PABPC1P11940 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.67■□□□□ 0.9
PABPC1P11940 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.66■□□□□ 0.9
PABPC1P11940 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.66■□□□□ 0.9
PABPC1P11940 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PABPC1P11940 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.66■□□□□ 0.9
PABPC1P11940 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.66■□□□□ 0.9
PABPC1P11940 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PABPC1P11940 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.66■□□□□ 0.9
PABPC1P11940 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.66■□□□□ 0.9
PABPC1P11940 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
PABPC1P11940 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PABPC1P11940 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PABPC1P11940 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PABPC1P11940 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PABPC1P11940 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PABPC1P11940 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PABPC1P11940 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PABPC1P11940 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PABPC1P11940 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PABPC1P11940 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.65■□□□□ 0.9
PABPC1P11940 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PABPC1P11940 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PABPC1P11940 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms