Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 MDM20YOL076W 2391 nt1.78□□□□□ -2.12
VPS9P54787 MSS11YMR164C 2277 nt1.77□□□□□ -2.13
VPS9P54787 QCR7YDR529C 384 nt1.77□□□□□ -2.13
VPS9P54787 CGI121YML036W 546 nt1.77□□□□□ -2.13
VPS9P54787 FYV12YOR183W 390 nt1.77□□□□□ -2.13
VPS9P54787 EAF6YJR082C 342 nt1.76□□□□□ -2.13
VPS9P54787 RPS18BYML026C 441 nt1.76□□□□□ -2.13
VPS9P54787 GPI15YNL038W 690 nt1.76□□□□□ -2.13
VPS9P54787 NOP15YNL110C 663 nt1.76□□□□□ -2.13
VPS9P54787 YBR121C-AYBR121C-A 159 nt1.76□□□□□ -2.13
VPS9P54787 YBR184WYBR184W 1572 nt1.76□□□□□ -2.13
VPS9P54787 TDA9YML081W 3756 nt1.75□□□□□ -2.13
VPS9P54787 IRE1YHR079C 3348 nt1.75□□□□□ -2.13
VPS9P54787 APQ13YJL075C 417 nt1.75□□□□□ -2.13
VPS9P54787 YKL183C-AYKL183C-A 213 nt1.75□□□□□ -2.13
VPS9P54787 DDR48YMR173W 1293 nt1.75□□□□□ -2.13
VPS9P54787 YOR248WYOR248W 303 nt1.75□□□□□ -2.13
VPS9P54787 BRR2YER172C 6492 nt1.74□□□□□ -2.13
VPS9P54787 COX1Q0045 1605 nt1.74□□□□□ -2.13
VPS9P54787 MCM22YJR135C 720 nt1.74□□□□□ -2.13
VPS9P54787 FCF2YLR051C 654 nt1.74□□□□□ -2.13
VPS9P54787 EGD1YPL037C 474 nt1.74□□□□□ -2.13
VPS9P54787 SEF1YBL066C 3447 nt1.74□□□□□ -2.13
VPS9P54787 LRE1YCL051W 1752 nt1.74□□□□□ -2.13
VPS9P54787 RLM1YPL089C 2031 nt1.74□□□□□ -2.13
VPS9P54787 NOP53YPL146C 1368 nt1.73□□□□□ -2.13
VPS9P54787 YSW1YBR148W 1830 nt1.73□□□□□ -2.13
VPS9P54787 RPL42BYHR141C 321 nt1.73□□□□□ -2.13
VPS9P54787 YMR230W-AYMR230W-A 189 nt1.73□□□□□ -2.13
VPS9P54787 YMR247W-AYMR247W-A 144 nt1.73□□□□□ -2.13
VPS9P54787 RPL42AYNL162W 321 nt1.73□□□□□ -2.13
VPS9P54787 MMS22YLR320W 4365 nt1.73□□□□□ -2.13
VPS9P54787 DNF3YMR162C 4971 nt1.73□□□□□ -2.13
VPS9P54787 GUP1YGL084C 1683 nt1.72□□□□□ -2.13
VPS9P54787 YDL152WYDL152W 366 nt1.72□□□□□ -2.13
VPS9P54787 KIP1YBL063W 3336 nt1.71□□□□□ -2.14
VPS9P54787 CTR9YOL145C 3234 nt1.71□□□□□ -2.14
VPS9P54787 ATP17YDR377W 306 nt1.71□□□□□ -2.14
VPS9P54787 YCL046WYCL046W 324 nt1.71□□□□□ -2.14
VPS9P54787 TRM3YDL112W 4311 nt1.71□□□□□ -2.14
VPS9P54787 DOT6YER088C 2013 nt1.71□□□□□ -2.14
VPS9P54787 SKI3YPR189W 4299 nt1.71□□□□□ -2.14
VPS9P54787 YOR019WYOR019W 2193 nt1.71□□□□□ -2.14
VPS9P54787 HMI1YOL095C 2121 nt1.7□□□□□ -2.14
VPS9P54787 KCS1YDR017C 3153 nt1.7□□□□□ -2.14
VPS9P54787 HUR1YGL168W 333 nt1.7□□□□□ -2.14
VPS9P54787 YHR214W-AYHR214W-A 486 nt1.7□□□□□ -2.14
VPS9P54787 ABM1YJR108W 372 nt1.7□□□□□ -2.14
VPS9P54787 YAR068WYAR068W 486 nt1.7□□□□□ -2.14
VPS9P54787 PBI2YNL015W 228 nt1.7□□□□□ -2.14
VPS9P54787 YGR109W-BYGR109W-B 4644 nt1.7□□□□□ -2.14
VPS9P54787 UTP21YLR409C 2820 nt1.69□□□□□ -2.14
VPS9P54787 YJR098CYJR098C 1971 nt1.69□□□□□ -2.14
VPS9P54787 MEC1YBR136W 7107 nt1.69□□□□□ -2.14
VPS9P54787 YGR025WYGR025W 303 nt1.69□□□□□ -2.14
VPS9P54787 YHR139C-AYHR139C-A 312 nt1.69□□□□□ -2.14
VPS9P54787 SPO24YPR036W-A 204 nt1.69□□□□□ -2.14
VPS9P54787 YPR099CYPR099C 357 nt1.69□□□□□ -2.14
VPS9P54787 YER135CYER135C 393 nt1.68□□□□□ -2.14
VPS9P54787 PAU18YLL064C 363 nt1.68□□□□□ -2.14
VPS9P54787 PAU6YNR076W 363 nt1.68□□□□□ -2.14
VPS9P54787 SBE22YHR103W 2559 nt1.67□□□□□ -2.14
VPS9P54787 HMLALPHA2YCL067C 633 nt1.67□□□□□ -2.14
VPS9P54787 MATALPHA2YCR039C 633 nt1.67□□□□□ -2.14
VPS9P54787 YER084W-AYER084W-A 513 nt1.67□□□□□ -2.14
VPS9P54787 BIG1YHR101C 1008 nt1.67□□□□□ -2.14
VPS9P54787 TMA22YJR014W 597 nt1.67□□□□□ -2.14
VPS9P54787 YLR269CYLR269C 351 nt1.67□□□□□ -2.14
VPS9P54787 YOR146WYOR146W 306 nt1.67□□□□□ -2.14
VPS9P54787 snR13snR13 124 nt1.67□□□□□ -2.14
VPS9P54787 OSH6YKR003W 1347 nt1.66□□□□□ -2.14
VPS9P54787 FRK1YPL141C 2598 nt1.66□□□□□ -2.14
VPS9P54787 COA6YMR244C-A 315 nt1.66□□□□□ -2.14
VPS9P54787 PAN3YKL025C 2040 nt1.66□□□□□ -2.14
VPS9P54787 PMD1YER132C 5262 nt1.66□□□□□ -2.14
VPS9P54787 GNT1YOR320C 1476 nt1.65□□□□□ -2.15
VPS9P54787 MXR1YER042W 555 nt1.65□□□□□ -2.15
VPS9P54787 RPL16AYIL133C 600 nt1.65□□□□□ -2.15
VPS9P54787 CTF4YPR135W 2784 nt1.65□□□□□ -2.15
VPS9P54787 IRR1YIL026C 3453 nt1.65□□□□□ -2.15
VPS9P54787 SFB2YNL049C 2631 nt1.65□□□□□ -2.15
VPS9P54787 NUP192YJL039C 5052 nt1.65□□□□□ -2.15
VPS9P54787 SXM1YDR395W 2835 nt1.64□□□□□ -2.15
VPS9P54787 YCR001WYCR001W 315 nt1.64□□□□□ -2.15
VPS9P54787 YGR290WYGR290W 444 nt1.64□□□□□ -2.15
VPS9P54787 YHR028W-AYHR028W-A 321 nt1.64□□□□□ -2.15
VPS9P54787 RPF1YHR088W 888 nt1.64□□□□□ -2.15
VPS9P54787 YNL122CYNL122C 348 nt1.64□□□□□ -2.15
VPS9P54787 YBR032WYBR032W 303 nt1.64□□□□□ -2.15
VPS9P54787 TSC3YBR058C-A 243 nt1.64□□□□□ -2.15
VPS9P54787 MSH5YDL154W 2706 nt1.63□□□□□ -2.15
VPS9P54787 YDR509WYDR509W 348 nt1.63□□□□□ -2.15
VPS9P54787 YER023C-AYER023C-A 213 nt1.63□□□□□ -2.15
VPS9P54787 YGR045CYGR045C 363 nt1.63□□□□□ -2.15
VPS9P54787 YGR265WYGR265W 411 nt1.63□□□□□ -2.15
VPS9P54787 YNL114CYNL114C 372 nt1.63□□□□□ -2.15
VPS9P54787 FMP23YBR047W 528 nt1.63□□□□□ -2.15
VPS9P54787 ALK1YGL021W 2283 nt1.63□□□□□ -2.15
VPS9P54787 YJL022WYJL022W 309 nt1.62□□□□□ -2.15
VPS9P54787 YBL073WYBL073W 312 nt1.62□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 34 ms