Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 YNL337WYNL337W 255 nt3.28□□□□□ -1.88
SSF1P38789 RSE1YML049C 4086 nt3.28□□□□□ -1.88
SSF1P38789 YPL150WYPL150W 2706 nt3.27□□□□□ -1.89
SSF1P38789 YHL042WYHL042W 453 nt3.27□□□□□ -1.89
SSF1P38789 RPA34YJL148W 702 nt3.27□□□□□ -1.89
SSF1P38789 PCC1YKR095W-A 267 nt3.27□□□□□ -1.89
SSF1P38789 YOR008C-AYOR008C-A 225 nt3.27□□□□□ -1.89
SSF1P38789 UBP14YBR058C 2346 nt3.27□□□□□ -1.89
SSF1P38789 RAX2YLR084C 3663 nt3.27□□□□□ -1.89
SSF1P38789 BCK1YJL095W 4437 nt3.27□□□□□ -1.89
SSF1P38789 ATG13YPR185W 2217 nt3.27□□□□□ -1.89
SSF1P38789 SCH9YHR205W 2475 nt3.27□□□□□ -1.89
SSF1P38789 ALG13YGL047W 609 nt3.26□□□□□ -1.89
SSF1P38789 YIL032CYIL032C 357 nt3.26□□□□□ -1.89
SSF1P38789 BLI1YKL061W 342 nt3.26□□□□□ -1.89
SSF1P38789 YPR203WYPR203W 309 nt3.26□□□□□ -1.89
SSF1P38789 HDA3YPR179C 1968 nt3.25□□□□□ -1.89
SSF1P38789 MNL2YLR057W 2550 nt3.25□□□□□ -1.89
SSF1P38789 EFR3YMR212C 2349 nt3.25□□□□□ -1.89
SSF1P38789 NPC2YDL046W 522 nt3.25□□□□□ -1.89
SSF1P38789 DYN2YDR424C 279 nt3.25□□□□□ -1.89
SSF1P38789 YML007C-AYML007C-A 111 nt3.25□□□□□ -1.89
SSF1P38789 CDC53YDL132W 2448 nt3.25□□□□□ -1.89
SSF1P38789 TOP2YNL088W 4287 nt3.25□□□□□ -1.89
SSF1P38789 COG8YML071C 1824 nt3.24□□□□□ -1.89
SSF1P38789 YPP1YGR198W 2454 nt3.24□□□□□ -1.89
SSF1P38789 YER079C-AYER079C-A 339 nt3.24□□□□□ -1.89
SSF1P38789 YKL183C-AYKL183C-A 213 nt3.24□□□□□ -1.89
SSF1P38789 EMC6YLL014W 327 nt3.24□□□□□ -1.89
SSF1P38789 NUT2YPR168W 474 nt3.24□□□□□ -1.89
SSF1P38789 SMY2YBR172C 2223 nt3.24□□□□□ -1.89
SSF1P38789 YLR278CYLR278C 4026 nt3.23□□□□□ -1.89
SSF1P38789 SPO22YIL073C 2928 nt3.23□□□□□ -1.89
SSF1P38789 RPS29AYLR388W 171 nt3.23□□□□□ -1.89
SSF1P38789 DAD3YBR233W-A 285 nt3.23□□□□□ -1.89
SSF1P38789 ISW1YBR245C 3390 nt3.23□□□□□ -1.89
SSF1P38789 ARP7YPR034W 1434 nt3.22□□□□□ -1.89
SSF1P38789 YNL018CYNL018C 1839 nt3.22□□□□□ -1.89
SSF1P38789 YDL062WYDL062W 426 nt3.22□□□□□ -1.89
SSF1P38789 YLR146W-AYLR146W-A 189 nt3.22□□□□□ -1.89
SSF1P38789 YOR333CYOR333C 417 nt3.22□□□□□ -1.89
SSF1P38789 snR49snR49 165 nt3.22□□□□□ -1.89
SSF1P38789 BUB1YGR188C 3066 nt3.22□□□□□ -1.89
SSF1P38789 VPS34YLR240W 2628 nt3.22□□□□□ -1.89
SSF1P38789 INP52YNL106C 3552 nt3.21□□□□□ -1.9
SSF1P38789 SWA2YDR320C 2007 nt3.21□□□□□ -1.9
SSF1P38789 YMR046W-AYMR046W-A 129 nt3.21□□□□□ -1.9
SSF1P38789 SLN1YIL147C 3663 nt3.21□□□□□ -1.9
SSF1P38789 FAR11YNL127W 2862 nt3.21□□□□□ -1.9
SSF1P38789 RAD61YDR014W 1944 nt3.21□□□□□ -1.9
SSF1P38789 GRR1YJR090C 3456 nt3.2□□□□□ -1.9
SSF1P38789 MRD1YPR112C 2664 nt3.2□□□□□ -1.9
SSF1P38789 YPR063CYPR063C 423 nt3.2□□□□□ -1.9
SSF1P38789 SEC26YDR238C 2922 nt3.2□□□□□ -1.9
SSF1P38789 COS111YBR203W 2775 nt3.2□□□□□ -1.9
SSF1P38789 ESL2YKR096W 3588 nt3.2□□□□□ -1.9
SSF1P38789 ZRG8YER033C 3231 nt3.19□□□□□ -1.9
SSF1P38789 TUS1YLR425W 3924 nt3.19□□□□□ -1.9
SSF1P38789 YDR426CYDR426C 378 nt3.19□□□□□ -1.9
SSF1P38789 TRS130YMR218C 3309 nt3.19□□□□□ -1.9
SSF1P38789 RPO41YFL036W 4056 nt3.19□□□□□ -1.9
SSF1P38789 YCR018C-AYCR018C-A 255 nt3.18□□□□□ -1.9
SSF1P38789 YFH1YDL120W 525 nt3.18□□□□□ -1.9
SSF1P38789 CDC36YDL165W 576 nt3.18□□□□□ -1.9
SSF1P38789 YEL020C-BYEL020C-B 198 nt3.18□□□□□ -1.9
SSF1P38789 YIL174WYIL174W 228 nt3.18□□□□□ -1.9
SSF1P38789 YJL222W-AYJL222W-A 228 nt3.18□□□□□ -1.9
SSF1P38789 STB4YMR019W 2850 nt3.18□□□□□ -1.9
SSF1P38789 MGM1YOR211C 2646 nt3.18□□□□□ -1.9
SSF1P38789 snR70snR70 164 nt3.17□□□□□ -1.9
SSF1P38789 tW(CCA)G1tW(CCA)G1 72 nt3.17□□□□□ -1.9
SSF1P38789 tW(CCA)G2tW(CCA)G2 72 nt3.17□□□□□ -1.9
SSF1P38789 tW(CCA)JtW(CCA)J 72 nt3.17□□□□□ -1.9
SSF1P38789 tW(CCA)KtW(CCA)K 72 nt3.17□□□□□ -1.9
SSF1P38789 tW(CCA)MtW(CCA)M 72 nt3.17□□□□□ -1.9
SSF1P38789 tW(CCA)PtW(CCA)P 72 nt3.17□□□□□ -1.9
SSF1P38789 YNL114CYNL114C 372 nt3.17□□□□□ -1.9
SSF1P38789 AXL1YPR122W 3627 nt3.17□□□□□ -1.9
SSF1P38789 SWI6YLR182W 2412 nt3.17□□□□□ -1.9
SSF1P38789 YGR250CYGR250C 2346 nt3.16□□□□□ -1.9
SSF1P38789 KEL2YGR238C 2649 nt3.16□□□□□ -1.9
SSF1P38789 UPS1YLR193C 528 nt3.16□□□□□ -1.9
SSF1P38789 YBL083CYBL083C 426 nt3.16□□□□□ -1.9
SSF1P38789 PTP3YER075C 2787 nt3.16□□□□□ -1.9
SSF1P38789 PDR3YBL005W 2931 nt3.16□□□□□ -1.9
SSF1P38789 IRR1YIL026C 3453 nt3.16□□□□□ -1.9
SSF1P38789 YKU80YMR106C 1890 nt3.16□□□□□ -1.9
SSF1P38789 YIL080WYIL080W 4722 nt3.15□□□□□ -1.9
SSF1P38789 SLM1YIL105C 2061 nt3.15□□□□□ -1.9
SSF1P38789 SET2YJL168C 2202 nt3.15□□□□□ -1.9
SSF1P38789 snR80snR80 171 nt3.15□□□□□ -1.91
SSF1P38789 SDH2YLL041C 801 nt3.15□□□□□ -1.91
SSF1P38789 YOL155W-AYOL155W-A 135 nt3.15□□□□□ -1.91
SSF1P38789 YPR002C-AYPR002C-A 198 nt3.15□□□□□ -1.91
SSF1P38789 KRE33YNL132W 3171 nt3.14□□□□□ -1.91
SSF1P38789 ORC2YBR060C 1863 nt3.14□□□□□ -1.91
SSF1P38789 RPL42BYHR141C 321 nt3.14□□□□□ -1.91
SSF1P38789 RPS22AYJL190C 393 nt3.14□□□□□ -1.91
SSF1P38789 TRX1YLR043C 312 nt3.14□□□□□ -1.91
SSF1P38789 RPL42AYNL162W 321 nt3.14□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 38.4 ms