Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
AFAP1Q8N556 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
AFAP1Q8N556 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
AFAP1Q8N556 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC30.7■■■□□ 2.51
AFAP1Q8N556 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC30.7■■■□□ 2.51
AFAP1Q8N556 RNF146-204ENST00000476956 884 ntTSL 2 BASIC30.7■■■□□ 2.51
AFAP1Q8N556 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
AFAP1Q8N556 GLDC-219ENST00000640208 420 ntTSL 2 BASIC30.7■■■□□ 2.51
AFAP1Q8N556 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
AFAP1Q8N556 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
AFAP1Q8N556 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
AFAP1Q8N556 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
AFAP1Q8N556 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC30.7■■■□□ 2.5
AFAP1Q8N556 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.69■■■□□ 2.5
AFAP1Q8N556 MIR1238-201ENST00000408483 83 ntBASIC30.69■■■□□ 2.5
AFAP1Q8N556 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
AFAP1Q8N556 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
AFAP1Q8N556 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
AFAP1Q8N556 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
AFAP1Q8N556 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
AFAP1Q8N556 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
AFAP1Q8N556 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
AFAP1Q8N556 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
AFAP1Q8N556 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC30.68■■■□□ 2.5
AFAP1Q8N556 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC30.68■■■□□ 2.5
AFAP1Q8N556 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC30.68■■■□□ 2.5
AFAP1Q8N556 RMI2-205ENST00000576027 818 ntTSL 2 BASIC30.68■■■□□ 2.5
AFAP1Q8N556 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
AFAP1Q8N556 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
AFAP1Q8N556 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
AFAP1Q8N556 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC30.68■■■□□ 2.5
AFAP1Q8N556 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
AFAP1Q8N556 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
AFAP1Q8N556 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
AFAP1Q8N556 LINC01568-207ENST00000641790 1380 ntBASIC30.67■■■□□ 2.5
AFAP1Q8N556 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
AFAP1Q8N556 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
AFAP1Q8N556 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
AFAP1Q8N556 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
AFAP1Q8N556 TERF1P1-201ENST00000311003 1181 ntBASIC30.67■■■□□ 2.5
AFAP1Q8N556 AL390955.1-201ENST00000428694 934 ntBASIC30.67■■■□□ 2.5
AFAP1Q8N556 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
AFAP1Q8N556 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC30.67■■■□□ 2.5
AFAP1Q8N556 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
AFAP1Q8N556 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.67■■■□□ 2.5
AFAP1Q8N556 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
AFAP1Q8N556 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
AFAP1Q8N556 UNC93B2-201ENST00000285383 730 ntBASIC30.66■■■□□ 2.5
AFAP1Q8N556 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
AFAP1Q8N556 AC010947.1-201ENST00000623454 693 ntBASIC30.66■■■□□ 2.5
AFAP1Q8N556 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC30.66■■■□□ 2.5
AFAP1Q8N556 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC30.66■■■□□ 2.5
AFAP1Q8N556 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC30.66■■■□□ 2.5
AFAP1Q8N556 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
AFAP1Q8N556 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
AFAP1Q8N556 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
AFAP1Q8N556 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC30.65■■■□□ 2.5
AFAP1Q8N556 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
AFAP1Q8N556 MFF-203ENST00000349901 1716 ntTSL 2 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
AFAP1Q8N556 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
AFAP1Q8N556 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
AFAP1Q8N556 CRAT-202ENST00000393384 973 ntTSL 2 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
AFAP1Q8N556 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
AFAP1Q8N556 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 CFL2-205ENST00000555765 632 ntTSL 2 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
AFAP1Q8N556 AL031963.3-201ENST00000606441 850 ntBASIC30.64■■■□□ 2.5
AFAP1Q8N556 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
AFAP1Q8N556 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
AFAP1Q8N556 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
AFAP1Q8N556 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
AFAP1Q8N556 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC30.64■■■□□ 2.49
AFAP1Q8N556 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC30.63■■■□□ 2.49
AFAP1Q8N556 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC30.63■■■□□ 2.49
AFAP1Q8N556 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
AFAP1Q8N556 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
AFAP1Q8N556 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC30.63■■■□□ 2.49
AFAP1Q8N556 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
AFAP1Q8N556 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
AFAP1Q8N556 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
AFAP1Q8N556 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
AFAP1Q8N556 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
AFAP1Q8N556 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
AFAP1Q8N556 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
AFAP1Q8N556 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
AFAP1Q8N556 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
AFAP1Q8N556 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
AFAP1Q8N556 AC023632.3-201ENST00000521633 145 ntBASIC30.62■■■□□ 2.49
AFAP1Q8N556 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
AFAP1Q8N556 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms