Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ARID3CA6NKF2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
ARID3CA6NKF2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ARID3CA6NKF2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.93■■■□□ 2.7
ARID3CA6NKF2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.93■■■□□ 2.7
ARID3CA6NKF2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.93■■■□□ 2.7
ARID3CA6NKF2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ARID3CA6NKF2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC31.93■■■□□ 2.7
ARID3CA6NKF2 PGM5P4-201ENST00000421970 445 ntBASIC31.93■■■□□ 2.7
ARID3CA6NKF2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ARID3CA6NKF2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ARID3CA6NKF2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 F2R-202ENST00000505600 442 ntTSL 2 BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
ARID3CA6NKF2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ARID3CA6NKF2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC31.91■■■□□ 2.7
ARID3CA6NKF2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC31.91■■■□□ 2.7
ARID3CA6NKF2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ARID3CA6NKF2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
ARID3CA6NKF2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC31.9■■■□□ 2.7
ARID3CA6NKF2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
ARID3CA6NKF2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARID3CA6NKF2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARID3CA6NKF2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
ARID3CA6NKF2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC31.9■■■□□ 2.7
ARID3CA6NKF2 AP000525.1-201ENST00000608286 694 ntBASIC31.9■■■□□ 2.7
ARID3CA6NKF2 AC079598.2-202ENST00000546624 1451 ntBASIC31.9■■■□□ 2.7
ARID3CA6NKF2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 KRT18P57-201ENST00000443599 1254 ntBASIC31.89■■■□□ 2.7
ARID3CA6NKF2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
ARID3CA6NKF2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC31.89■■■□□ 2.69
ARID3CA6NKF2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ARID3CA6NKF2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC31.88■■■□□ 2.69
ARID3CA6NKF2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
ARID3CA6NKF2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC31.88■■■□□ 2.69
ARID3CA6NKF2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC31.88■■■□□ 2.69
ARID3CA6NKF2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
ARID3CA6NKF2 AL049597.2-201ENST00000565575 961 ntBASIC31.88■■■□□ 2.69
ARID3CA6NKF2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC31.88■■■□□ 2.69
ARID3CA6NKF2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 AC005521.1-201ENST00000393351 872 ntBASIC31.87■■■□□ 2.69
ARID3CA6NKF2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 RBM17P1-201ENST00000453646 1190 ntBASIC31.87■■■□□ 2.69
ARID3CA6NKF2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ARID3CA6NKF2 NBPF21P-201ENST00000425093 1451 ntBASIC31.86■■■□□ 2.69
ARID3CA6NKF2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC31.86■■■□□ 2.69
ARID3CA6NKF2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms