Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp2O88623 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp2O88623 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.08■□□□□ 0.48
Usp2O88623 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp2O88623 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Usp2O88623 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp2O88623 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp2O88623 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp2O88623 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.07■□□□□ 0.48
Usp2O88623 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.07■□□□□ 0.48
Usp2O88623 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.07■□□□□ 0.48
Usp2O88623 Gm3375-201ENSMUST00000203929 796 ntBASIC18.07■□□□□ 0.48
Usp2O88623 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.07■□□□□ 0.48
Usp2O88623 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp2O88623 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp2O88623 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp2O88623 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp2O88623 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp2O88623 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp2O88623 Gm12085-201ENSMUST00000119263 940 ntBASIC18.06■□□□□ 0.48
Usp2O88623 Gm29791-202ENSMUST00000207888 369 ntBASIC18.06■□□□□ 0.48
Usp2O88623 Timm23-208ENSMUST00000226683 750 ntBASIC18.06■□□□□ 0.48
Usp2O88623 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp2O88623 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp2O88623 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp2O88623 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Usp2O88623 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp2O88623 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp2O88623 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Usp2O88623 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp2O88623 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.05■□□□□ 0.48
Usp2O88623 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Usp2O88623 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp2O88623 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp2O88623 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Usp2O88623 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.04■□□□□ 0.48
Usp2O88623 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp2O88623 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Usp2O88623 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp2O88623 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Usp2O88623 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Gm43799-201ENSMUST00000201845 579 ntBASIC18.03■□□□□ 0.48
Usp2O88623 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.03■□□□□ 0.48
Usp2O88623 Odf3b-204ENSMUST00000227834 930 ntBASIC18.03■□□□□ 0.48
Usp2O88623 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp2O88623 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms